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Lag0020191 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020191
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr5:48705217..48705648
RNA-Seq ExpressionLag0020191
SyntenyLag0020191
Gene Ontology termsGO:0006284 - base-excision repair (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008081 - phosphoric diester hydrolase activity (molecular function)
GO:0008311 - double-stranded DNA 3'-5' exodeoxyribonuclease activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR004808 - AP endonuclease 1
IPR020847 - AP endonuclease 1, binding site
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW16209.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.6e-2049.49Show/hide
Query:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
        MKI+SWNVRGLG+R+KR +IKD + S NPD+V++QE+K    DRR V S+W+ R+  W+AL A  ++GGIL+IW   ++   + V+G+FS+S+  S  G
Subjt:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
RVW33941.1 hypothetical protein CK203_082987 [Vitis vinifera]3.4e-2049.49Show/hide
Query:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
        MKI+SWNVRGLG+R+KR +IKD + S NPD+V++QE+K    DRR V S+W+ R+  W+AL A  ++GGIL+IW   ++   + V+G+FS+S+  S  G
Subjt:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
RVW64166.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.6e-2049.49Show/hide
Query:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
        MKI+SWNVRGLG+R+KR +IKD + S NPD+V++QE+K    DRR V S+W+ R+  W+AL A  ++GGIL+IW   ++   + V+G+FS+S+  S  G
Subjt:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
RVW91468.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.6e-2049.49Show/hide
Query:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
        MKI+SWNVRGLG+R+KR +IKD + S NPD+V++QE+K    DRR V S+W+ R+  W+AL A  ++GGIL+IW   ++   + V+G+FS+S+  S  G
Subjt:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
RVW93866.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.6e-2049.49Show/hide
Query:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
        MKI+SWNVRGLG+R+KR +IKD + S NPD+V++QE+K    DRR V S+W+ R+  W+AL A  ++GGIL+IW   ++   + V+G+FS+S+  S  G
Subjt:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
TrEMBL top hitse value%identityAlignment
A0A438BYX6 Transposon TX1 uncharacterized 149 kDa protein1.3e-2049.49Show/hide
Query:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
        MKI+SWNVRGLG+R+KR +IKD + S NPD+V++QE+K    DRR V S+W+ R+  W+AL A  ++GGIL+IW   ++   + V+G+FS+S+  S  G
Subjt:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
A0A438FW30 Transposon TX1 uncharacterized 149 kDa protein1.3e-2049.49Show/hide
Query:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
        MKI+SWNVRGLG+R+KR +IKD + S NPD+V++QE+K    DRR V S+W+ R+  W+AL A  ++GGIL+IW   ++   + V+G+FS+S+  S  G
Subjt:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
A0A438I435 Transposon TX1 uncharacterized 149 kDa protein1.3e-2049.49Show/hide
Query:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
        MKI+SWNVRGLG+R+KR +IKD + S NPD+V++QE+K    DRR V S+W+ R+  W+AL A  ++GGIL+IW   ++   + V+G+FS+S+  S  G
Subjt:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
A0A438IAX3 Transposon TX1 uncharacterized 149 kDa protein1.3e-2049.49Show/hide
Query:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
        MKI+SWNVRGLG+R+KR +IKD + S NPD+V++QE+K    DRR V S+W+ R+  W+AL A  ++GGIL+IW   ++   + V+G+FS+S+  S  G
Subjt:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQG
A0A803P8A0 Uncharacterized protein4.4e-2152Show/hide
Query:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQGQ
        MKIL+WN+RG G + KRA IK  IC  NPD+V+LQE K   +DRR + SIW SR  AW+ L AI  +GG LLIW   ++ V DS++G FSIS+  + +G+
Subjt:  MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQGQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATTCTCTCGTGGAATGTCAGGGGGCTAGGTGCGAGGTCCAAGAGAGCCCTCATTAAAGACCTCATTTGTAGTGTTAATCCCGATATAGTCGTTTTGCAAGAGTC
CAAGTTGAATCAGATTGATAGAAGGTTGGTGAAATCCATTTGGAGCTCCAGACACATTGCGTGGTTGGCTTTGAATGCCATCAATTCAGCTGGTGGTATTTTACTCATAT
GGAAAGAGTCTGTTGTTGATGTGACAGACTCAGTTTTGGGGGCCTTCTCTATTTCTATCCACCGTTCCTTCCAGGGTCAGATTGAGGGGGGGGGGTCTCCGGGGTCTATG
GGTTGTGTTCTTACAGCGAAAAAGGACAATTTTTACAAGAGCTCTTCGATCTTCAAGGGTTGTGTCAGGGGGCGTGGTGTATTGGTGGTGACTTTAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATTCTCTCGTGGAATGTCAGGGGGCTAGGTGCGAGGTCCAAGAGAGCCCTCATTAAAGACCTCATTTGTAGTGTTAATCCCGATATAGTCGTTTTGCAAGAGTC
CAAGTTGAATCAGATTGATAGAAGGTTGGTGAAATCCATTTGGAGCTCCAGACACATTGCGTGGTTGGCTTTGAATGCCATCAATTCAGCTGGTGGTATTTTACTCATAT
GGAAAGAGTCTGTTGTTGATGTGACAGACTCAGTTTTGGGGGCCTTCTCTATTTCTATCCACCGTTCCTTCCAGGGTCAGATTGAGGGGGGGGGGTCTCCGGGGTCTATG
GGTTGTGTTCTTACAGCGAAAAAGGACAATTTTTACAAGAGCTCTTCGATCTTCAAGGGTTGTGTCAGGGGGCGTGGTGTATTGGTGGTGACTTTAATATGA
Protein sequenceShow/hide protein sequence
MKILSWNVRGLGARSKRALIKDLICSVNPDIVVLQESKLNQIDRRLVKSIWSSRHIAWLALNAINSAGGILLIWKESVVDVTDSVLGAFSISIHRSFQGQIEGGGSPGSM
GCVLTAKKDNFYKSSSIFKGCVRGRGVLVVTLI