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Lag0020193 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020193
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDUF4283 domain-containing protein
Genome locationchr5:48706536..48707982
RNA-Seq ExpressionLag0020193
SyntenyLag0020193
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050054.1 hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]3.6e-1045.12Show/hide
Query:  IGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGEE-LFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAF
        IGD  GGFIE  +    L D +E  ++++DNY GF+PA I++ D EE  F +QV+   EG   +ER   IHG+F  EAA  F
Subjt:  IGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGEE-LFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAF

TYK03139.1 hypothetical protein E5676_scaffold11G00140 [Cucumis melo var. makuwa]2.1e-1048.78Show/hide
Query:  IGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGE-ELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAF
        IG   GG I+  E      + +E ++KVR NY GFLPA +RI D E   F+VQVVT+ EG  LIER   +HG+F  +AA AF
Subjt:  IGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGE-ELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAF

TYK05719.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.2e-1045.16Show/hide
Query:  IGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGE-ELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAF--YRGPNDPFF
        IG   GG I+  E      + +E K+KVR NY GFLPA +RI D E   F+VQVVT+ EG  LIER   +HG+F  +AA +F  +   ++ FF
Subjt:  IGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGE-ELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAF--YRGPNDPFF

TYK23598.1 hypothetical protein E5676_scaffold500G001100 [Cucumis melo var. makuwa]3.6e-1043.01Show/hide
Query:  IGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGE-ELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAF--YRGPNDPFF
        IG   GG I+  E      + +E ++KVR NY GFLPA +RI D E   F++QVVT+ EG  LIER   +HG+F  +AA  F  +   ++ FF
Subjt:  IGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGE-ELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAF--YRGPNDPFF

XP_022149859.1 uncharacterized protein LOC111018186 [Momordica charantia]3.0e-1743.43Show/hide
Query:  KAIGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGEELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAFYRGPNDPFFCPTNIWR
        KAIG+ LGGFI+Y+++NS  I+C +V +KV+ NYCGF+PA I  +DG   F  +VV++++   L  +  GIHG F  EAA +F++G  +      + WR
Subjt:  KAIGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGEELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAFYRGPNDPFFCPTNIWR

TrEMBL top hitse value%identityAlignment
A0A5A7TV64 DUF4283 domain-containing protein1.7e-1043.01Show/hide
Query:  IGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGE-ELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAF--YRGPNDPFF
        IG   GG I+  E      + +E ++KVR NY GFLPA +RI D E   F++QVVT+ EG  LIER   +HG+F  +AA  F  +   ++ FF
Subjt:  IGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGE-ELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAF--YRGPNDPFF

A0A5D3BYI6 Uncharacterized protein1.0e-1048.78Show/hide
Query:  IGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGE-ELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAF
        IG   GG I+  E      + +E ++KVR NY GFLPA +RI D E   F+VQVVT+ EG  LIER   +HG+F  +AA AF
Subjt:  IGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGE-ELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAF

A0A5D3C5P2 LINE-1 retrotransposable element ORF2 protein5.9e-1145.16Show/hide
Query:  IGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGE-ELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAF--YRGPNDPFF
        IG   GG I+  E      + +E K+KVR NY GFLPA +RI D E   F+VQVVT+ EG  LIER   +HG+F  +AA +F  +   ++ FF
Subjt:  IGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGE-ELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAF--YRGPNDPFF

A0A5D3DJE1 DUF4283 domain-containing protein1.7e-1043.01Show/hide
Query:  IGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGE-ELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAF--YRGPNDPFF
        IG   GG I+  E      + +E ++KVR NY GFLPA +RI D E   F++QVVT+ EG  LIER   +HG+F  +AA  F  +   ++ FF
Subjt:  IGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGE-ELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAF--YRGPNDPFF

A0A6J1D6X4 uncharacterized protein LOC1110181861.5e-1743.43Show/hide
Query:  KAIGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGEELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAFYRGPNDPFFCPTNIWR
        KAIG+ LGGFI+Y+++NS  I+C +V +KV+ NYCGF+PA I  +DG   F  +VV++++   L  +  GIHG F  EAA +F++G  +      + WR
Subjt:  KAIGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGEELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAFYRGPNDPFFCPTNIWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTCCGATGAGCTTTCCGACTGGGTTCTGAGTGCTTTACGAGGGAGTGCCGGGTGTTTTCGGGATCTGGTAGATTTTCCAGCGGGAGGGTTGGGTTTTTTCTTTCT
TTGGTTATCATCGGAGGCCACTGAAGATTTTGAGATAGTGGGAAAAATAACCTGGTGGTTCCGGCTGGCTCTGAATTTAAAGGTTGGAAGGACTTTTCTAACCTTCTCAA
AGACTTCCTTAATGGAAAAGATGATCAGATTGAACCACCTGGTCACACCAAATAGAAGGAGAGATAAGGGAAGGTCCTTCGCTAATATTGTGCGAAGTAAACCAAATGCG
CCAAGTGACCTTCAGAAGAAAAAATATCCCAGCGAATGGAGAGACACCCAAGAGCGCAAAGGAATCCTTAAAGCGATTGGCGATTGTCTAGGTGGGTTTATTGAATATGA
AGAAAGCAACTCCCTGCTCATTGATTGCGTGGAAGTGAAAATGAAAGTCAGAGACAATTACTGTGGTTTTCTACCGGCGGGAATAAGGATTGTAGATGGTGAAGAGCTGT
TTAATGTTCAAGTGGTAACTTACCAAGAGGGCACCATGCTAATAGAAAGGATTGCCGGAATACATGGGAGTTTCTTGCCGGAGGCAGCTCATGCTTTCTATAGAGGACCG
AATGACCCTTTCTTTTGTCCGACGAATATATGGAGGTCGAAAATGGTCGCGATTATCCAATGGTTAATGTCCAAGAGATATCTGAGGAGGTGTCTGACAGTGGGCAACAG
CTGTCTAACATTGAGAGTAAATTTGAATTGTCCCGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCTCCGATGAGCTTTCCGACTGGGTTCTGAGTGCTTTACGAGGGAGTGCCGGGTGTTTTCGGGATCTGGTAGATTTTCCAGCGGGAGGGTTGGGTTTTTTCTTTCT
TTGGTTATCATCGGAGGCCACTGAAGATTTTGAGATAGTGGGAAAAATAACCTGGTGGTTCCGGCTGGCTCTGAATTTAAAGGTTGGAAGGACTTTTCTAACCTTCTCAA
AGACTTCCTTAATGGAAAAGATGATCAGATTGAACCACCTGGTCACACCAAATAGAAGGAGAGATAAGGGAAGGTCCTTCGCTAATATTGTGCGAAGTAAACCAAATGCG
CCAAGTGACCTTCAGAAGAAAAAATATCCCAGCGAATGGAGAGACACCCAAGAGCGCAAAGGAATCCTTAAAGCGATTGGCGATTGTCTAGGTGGGTTTATTGAATATGA
AGAAAGCAACTCCCTGCTCATTGATTGCGTGGAAGTGAAAATGAAAGTCAGAGACAATTACTGTGGTTTTCTACCGGCGGGAATAAGGATTGTAGATGGTGAAGAGCTGT
TTAATGTTCAAGTGGTAACTTACCAAGAGGGCACCATGCTAATAGAAAGGATTGCCGGAATACATGGGAGTTTCTTGCCGGAGGCAGCTCATGCTTTCTATAGAGGACCG
AATGACCCTTTCTTTTGTCCGACGAATATATGGAGGTCGAAAATGGTCGCGATTATCCAATGGTTAATGTCCAAGAGATATCTGAGGAGGTGTCTGACAGTGGGCAACAG
CTGTCTAACATTGAGAGTAAATTTGAATTGTCCCGCCTAA
Protein sequenceShow/hide protein sequence
MTSDELSDWVLSALRGSAGCFRDLVDFPAGGLGFFFLWLSSEATEDFEIVGKITWWFRLALNLKVGRTFLTFSKTSLMEKMIRLNHLVTPNRRRDKGRSFANIVRSKPNA
PSDLQKKKYPSEWRDTQERKGILKAIGDCLGGFIEYEESNSLLIDCVEVKMKVRDNYCGFLPAGIRIVDGEELFNVQVVTYQEGTMLIERIAGIHGSFLPEAAHAFYRGP
NDPFFCPTNIWRSKMVAIIQWLMSKRYLRRCLTVGNSCLTLRVNLNCPA