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Lag0020525 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020525
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionhomeobox protein knotted-1-like 1
Genome locationchr7:87478..89974
RNA-Seq ExpressionLag0020525
SyntenyLag0020525
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR005540 - KNOX1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596993.1 Homeobox protein knotted-1-like 2, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2158.1Show/hide
Query:  MEPENNCTEEQQEQELKGLQDEE----EGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSN
        M+  N+ T++    +L+   +EE    +G  LRRRISSHPLYGLL+ETHLNCLK GGIGE+DRGYLA DL++ ++N+I CLNTLNQSELDRFM++   + 
Subjt:  MEPENNCTEEQQEQELKGLQDEE----EGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSN

Query:  SALQE
        S L+E
Subjt:  SALQE
KAG7028461.1 Homeobox protein knotted-1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]6.8e-2258.1Show/hide
Query:  MEPENNCTEEQQEQELKGLQDEE----EGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSN
        M+  N+ T++    +L+   +EE    +G +LRRRISSHPLYGLL+ETHLNCLK GGIGE+DRGYLA DL++ ++N+I CLNTLNQSELDRFM++   + 
Subjt:  MEPENNCTEEQQEQELKGLQDEE----EGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSN

Query:  SALQE
        S L+E
Subjt:  SALQE
XP_022137557.1 protein KNATM [Momordica charantia]3.2e-2775.53Show/hide
Query:  EQELKGLQDEE-----EGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSNSALQE
        E E K LQDEE     EG ILRRRISSHPLYGLLVETHLNCLK GGIG++DRGYLATD+IKQQDN I CLNTLNQSELDRFM+T   + S L+E
Subjt:  EQELKGLQDEE-----EGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSNSALQE
XP_022945492.1 homeobox protein KNOX3 [Cucurbita moschata]1.5e-2158.1Show/hide
Query:  MEPENNCTEEQQEQELKGLQDEE----EGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSN
        M+  N+ T++    +L+   +EE    +G  LRRRISSHPLYGLL+ETHLNCLK GGIGE+DRGYLA DL++ ++N+I CLNTLNQSELDRFM++   + 
Subjt:  MEPENNCTEEQQEQELKGLQDEE----EGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSN

Query:  SALQE
        S L+E
Subjt:  SALQE
XP_038896017.1 homeobox protein knotted-1-like 2 [Benincasa hispida]1.6e-2364.49Show/hide
Query:  MEPENNCTEEQQEQELKGLQDEE------EGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESD
        ME EN CTEE+QE ELKGL+DE       EG +LR +IS+HPLY LLVETHLNCLK GGI        ATDLIKQQDNKI C N LNQSELDRFM+T   
Subjt:  MEPENNCTEEQQEQELKGLQDEE------EGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESD

Query:  SNSALQE
        + S L+E
Subjt:  SNSALQE
TrEMBL top hitse value%identityAlignment
A0A4P1R0C4 Uncharacterized protein8.4e-1048.48Show/hide
Query:  PENNCTEEQQEQELKGLQDEEEGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSNSALQE
        P  +  EE++EQE +G Q+EE   IL RRISSHPLYGLLVETHL CLK G I  +D         + Q  K   L    QS+LDRFM+    + S L+E
Subjt:  PENNCTEEQQEQELKGLQDEEEGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSNSALQE
A0A6J1C8K6 protein KNATM1.5e-2775.53Show/hide
Query:  EQELKGLQDEE-----EGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSNSALQE
        E E K LQDEE     EG ILRRRISSHPLYGLLVETHLNCLK GGIG++DRGYLATD+IKQQDN I CLNTLNQSELDRFM+T   + S L+E
Subjt:  EQELKGLQDEE-----EGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSNSALQE
A0A6J1G133 homeobox protein KNOX37.3e-2258.1Show/hide
Query:  MEPENNCTEEQQEQELKGLQDEE----EGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSN
        M+  N+ T++    +L+   +EE    +G  LRRRISSHPLYGLL+ETHLNCLK GGIGE+DRGYLA DL++ ++N+I CLNTLNQSELDRFM++   + 
Subjt:  MEPENNCTEEQQEQELKGLQDEE----EGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSN

Query:  SALQE
        S L+E
Subjt:  SALQE
A0A6J1IFV6 homeobox protein KNOX3-like1.3e-2158.1Show/hide
Query:  MEPENNCTEE----QQEQELKGLQDEEEGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSN
        M+  N+ T++    +QE+E  G+   + G +LRRRISSHPLYGLL++THLNCLK GGIGE+DRGYLA DL++ ++N+I CLNTLNQSELDRFM++   + 
Subjt:  MEPENNCTEE----QQEQELKGLQDEEEGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSN

Query:  SALQE
        S L+E
Subjt:  SALQE
A0A6P4DE57 homeobox protein knotted-1-like 12.9e-1048.35Show/hide
Query:  EPENNCTEEQQEQELKGLQDEEEGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDL--IKQQDNKIICLNTLNQSELDRFMQ
        + E  C EE++E+E +   DE+   IL+RRIS+HPLYGLLVE HL CLK G I  +DR      +  +KQQ+     LN  +QSELD FM+
Subjt:  EPENNCTEEQQEQELKGLQDEEEGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDL--IKQQDNKIICLNTLNQSELDRFMQ
SwissProt top hitse value%identityAlignment
F4HXU3 Protein KNATM1.6e-0539.56Show/hide
Query:  ENNCTEEQQEQELKGLQDE--EEGAILRRRISSHPLYGLLVETHLNCLK--GGGIGEVDRGYLATDL-IKQQDNKIICLNTLNQSELDRFM
        EN+  E  +++    L++E  EE  IL++RISSHPLYGLL+ +HLNCLK   G     +    A DL + +        +    SELD+FM
Subjt:  ENNCTEEQQEQELKGLQDE--EEGAILRRRISSHPLYGLLVETHLNCLK--GGGIGEVDRGYLATDL-IKQQDNKIICLNTLNQSELDRFM
Arabidopsis top hitse value%identityAlignment
AT1G14760.1 KNOX Arabidopsis thaliana meinox1.1e-0639.56Show/hide
Query:  ENNCTEEQQEQELKGLQDE--EEGAILRRRISSHPLYGLLVETHLNCLK--GGGIGEVDRGYLATDL-IKQQDNKIICLNTLNQSELDRFM
        EN+  E  +++    L++E  EE  IL++RISSHPLYGLL+ +HLNCLK   G     +    A DL + +        +    SELD+FM
Subjt:  ENNCTEEQQEQELKGLQDE--EEGAILRRRISSHPLYGLLVETHLNCLK--GGGIGEVDRGYLATDL-IKQQDNKIICLNTLNQSELDRFM
AT1G14760.2 KNOX Arabidopsis thaliana meinox8.6e-0736.89Show/hide
Query:  ENNCTEEQQEQELKGLQDE--EEGAILRRRISSHPLYGLLVETHLNCLK--GGGIGEVDRGYLATDL-IKQQDNKIICLNTLNQSELDRFMQTESDSNSA
        EN+  E  +++    L++E  EE  IL++RISSHPLYGLL+ +HLNCLK   G     +    A DL + +        +    SELD+FM+    +   
Subjt:  ENNCTEEQQEQELKGLQDE--EEGAILRRRISSHPLYGLLVETHLNCLK--GGGIGEVDRGYLATDL-IKQQDNKIICLNTLNQSELDRFMQTESDSNSA

Query:  LQE
        L+E
Subjt:  LQE
AT1G14760.3 KNOX Arabidopsis thaliana meinox1.5e-0653.06Show/hide
Query:  ENNCTEEQQEQELKGLQDE--EEGAILRRRISSHPLYGLLVETHLNCLK
        EN+  E  +++    L++E  EE  IL++RISSHPLYGLL+ +HLNCLK
Subjt:  ENNCTEEQQEQELKGLQDE--EEGAILRRRISSHPLYGLLVETHLNCLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCTGAGAACAATTGTACAGAAGAACAACAAGAGCAAGAACTAAAAGGGCTACAAGACGAAGAGGAAGGAGCAATACTGCGCAGGAGAATTTCCAGCCACCCCTT
ATATGGGCTGTTAGTTGAGACTCACCTCAACTGTTTGAAGGGTGGAGGTATAGGTGAAGTGGACAGAGGCTACTTAGCTACGGATTTGATCAAACAGCAAGATAACAAGA
TCATATGCTTAAACACGCTTAACCAATCAGAGCTAGATCGCTTCATGCAAACTGAATCTGACAGCAATTCAGCTCTTCAGGAAAGATCTTCCTCAACTAAACACACCAGA
GTTCTAGAATTCTCTCAGTCATATGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCTGAGAACAATTGTACAGAAGAACAACAAGAGCAAGAACTAAAAGGGCTACAAGACGAAGAGGAAGGAGCAATACTGCGCAGGAGAATTTCCAGCCACCCCTT
ATATGGGCTGTTAGTTGAGACTCACCTCAACTGTTTGAAGGGTGGAGGTATAGGTGAAGTGGACAGAGGCTACTTAGCTACGGATTTGATCAAACAGCAAGATAACAAGA
TCATATGCTTAAACACGCTTAACCAATCAGAGCTAGATCGCTTCATGCAAACTGAATCTGACAGCAATTCAGCTCTTCAGGAAAGATCTTCCTCAACTAAACACACCAGA
GTTCTAGAATTCTCTCAGTCATATGGGTAA
Protein sequenceShow/hide protein sequence
MEPENNCTEEQQEQELKGLQDEEEGAILRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMQTESDSNSALQERSSSTKHTR
VLEFSQSYG