; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0020537 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020537
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:166852..169519
RNA-Seq ExpressionLag0020537
SyntenyLag0020537
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035739.1 hypothetical protein E6C27_scaffold403G00100 [Cucumis melo var. makuwa]2.0e-6943.83Show/hide
Query:  AGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMDLWDGETISWTISFRRLLKEEEISDFQQLLVCLND
        +G SLRSPW+NI++ W+  ++LASF LGNG RI F +D W+ + P   ++  LFRIA  P  S +        SW ++FRR L++EEI++FQ LL  L+ 
Subjt:  AGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMDLWDGETISWTISFRRLLKEEEISDFQQLLVCLND

Query:  AIVYEFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEVFQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD
          V    D R WS+E+ G +S KSL  +L  +S ++K +F AI +S  P+RIN L+W+M+F  +  SE+LQ + P + +SPSIC LCL AS++L H+F  
Subjt:  AIVYEFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEVFQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD

Query:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ
        C  S   W ++ S+F L W  D S   +V QLL G ++    +++W    KA+L E+W ERN+RIFHD +    +  ++A L +++WCSL K F  +SIQ
Subjt:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ

Query:  DICLNWDA
        DICLNW+A
Subjt:  DICLNWDA

RVW53692.1 putative ribonuclease H protein [Vitis vinifera]2.4e-4333.97Show/hide
Query:  SLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMD-LWDGETISWTISFRRLLKEEEISDFQQLLVCLNDAI
        S R PW  I++V+++F  +  + +GNG RI FW D W  D P  ++YP LFR+    N S+   L       W ++FRR L + EI D + L+  L+D  
Subjt:  SLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMD-LWDGETISWTISFRRLLKEEEISDFQQLLVCLNDAI

Query:  VY-EFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEV-FQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD
        +     D+R+W L +SGL+SVKS F  L+ SS  ++    + +W S+ P ++   VW++    +N +++LQ R P  ALSP IC LC+   ES  HLF  
Subjt:  VY-EFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEV-FQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD

Query:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ
        C  +   W +L  + KL W   +S    +     G        +LW +   A++  +W+ERN RIF D +      + S    +S W   SK F G  + 
Subjt:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ

Query:  DICLNWDAFIFP
         I L+W A   P
Subjt:  DICLNWDAFIFP

RVX00257.1 putative ribonuclease H protein [Vitis vinifera]7.1e-4333.97Show/hide
Query:  SLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMD-LWDGETISWTISFRRLLKEEEISDFQQLLVCLNDAI
        S R PW  I++V+++F  +  + +GNG RI FW D W  D P  ++YP LFR+    N S+   L       W ++FRR L + EI D + L+  L+D  
Subjt:  SLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMD-LWDGETISWTISFRRLLKEEEISDFQQLLVCLNDAI

Query:  VY-EFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEV-FQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD
        +     D+R+W L +SGL+SVKS F  L+ SS  ++    + +W S+ P ++   VW++    +N +++LQ R P  ALSP IC LC+   ES  HLF  
Subjt:  VY-EFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEV-FQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD

Query:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ
        C  +   W +L  + KL W   +S    +     G        +LW     A++  +W+ERN RIF D +      + S    +S W   SK F G  + 
Subjt:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ

Query:  DICLNWDAFIFP
         I L+W A   P
Subjt:  DICLNWDAFIFP

TYK21876.1 hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa]2.2e-6842.9Show/hide
Query:  AGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMDLWDGETISWTISFRRLLKEEEISDFQQLLVCLND
        +G SLRS W+NI++ W+  ++LASF LGNG RI F +D W+ + P   ++  LF IA  P    +        SW ++FRR L++EEI++FQ LL  L+ 
Subjt:  AGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMDLWDGETISWTISFRRLLKEEEISDFQQLLVCLND

Query:  AIVYEFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEVFQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD
          V    D R WS+E+ G +S KSL  +L  +S ++K +F AI +S  P+RIN L+W+M+F  +N SE+LQ + P + +SPSIC LCL AS++L H+F  
Subjt:  AIVYEFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEVFQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD

Query:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ
        C  S   W ++ S+F L W  D S   +V QLL G ++    +++W    KA+L E+W ERN+RIFHD +    +  ++A L +++WCSL K F  +SIQ
Subjt:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ

Query:  DICLNWDAFI
        DICLNW+ F+
Subjt:  DICLNWDAFI

XP_038903695.1 uncharacterized protein LOC120090219 [Benincasa hispida]4.7e-8751.46Show/hide
Query:  GLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMDLWDGETISWTISFRRLLKEEEISDFQQLLVCLNDA
        G SL+SPW++ISK W + E LA+FKLGNGSRIAFWLD+W    PF   + SLFRI +LPN SV D WD    SW+I+FRR LK+EE+S FQ LL  +   
Subjt:  GLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMDLWDGETISWTISFRRLLKEEEISDFQQLLVCLNDA

Query:  IVYEFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEVFQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFDC
              D R+WS+ N+  Y+VKSL N+L   S + K +F  IWK+K P+R+N L+W+M+FG LN +EVLQ + P+ +LSP++C  CL+ SE   HLFF C
Subjt:  IVYEFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEVFQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFDC

Query:  VYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQD
         YS  CW KLL  F L   L   FK NV QLL  P+    ++LLW N VKA+L++LWFERN+RIF++ +    DR  +AR ++SSWC LS  F  +S+ D
Subjt:  VYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQD

Query:  ICLNWDAFI
          LNW+AFI
Subjt:  ICLNWDAFI

TrEMBL top hitse value%identityAlignment
A0A438F215 Putative ribonuclease H protein1.2e-4333.97Show/hide
Query:  SLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMD-LWDGETISWTISFRRLLKEEEISDFQQLLVCLNDAI
        S R PW  I++V+++F  +  + +GNG RI FW D W  D P  ++YP LFR+    N S+   L       W ++FRR L + EI D + L+  L+D  
Subjt:  SLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMD-LWDGETISWTISFRRLLKEEEISDFQQLLVCLNDAI

Query:  VY-EFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEV-FQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD
        +     D+R+W L +SGL+SVKS F  L+ SS  ++    + +W S+ P ++   VW++    +N +++LQ R P  ALSP IC LC+   ES  HLF  
Subjt:  VY-EFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEV-FQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD

Query:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ
        C  +   W +L  + KL W   +S    +     G        +LW +   A++  +W+ERN RIF D +      + S    +S W   SK F G  + 
Subjt:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ

Query:  DICLNWDAFIFP
         I L+W A   P
Subjt:  DICLNWDAFIFP

A0A438HT14 Transposon TX1 uncharacterized 149 kDa protein5.8e-4333.97Show/hide
Query:  SLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMD-LWDGETISWTISFRRLLKEEEISDFQQLLVCLNDAI
        S R PW  I++V+++F  +  + +GNG RI FW D W  D P  ++YP LFR+    N S+   L       W ++FRR L + EI D + L+  L+D  
Subjt:  SLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMD-LWDGETISWTISFRRLLKEEEISDFQQLLVCLNDAI

Query:  VY-EFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEV-FQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD
        +     D+R+W L +SGL+SVKS F  L+ SS  ++    + +W S+ P ++   VW++    +N +++LQ R P  ALSP IC LC+   ES  HLF  
Subjt:  VY-EFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEV-FQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD

Query:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ
        C  +   W +L  + KL W   +S    +     G        +LW     A++  +W+ERN RIF D +      + S    +S W   SK F G  + 
Subjt:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ

Query:  DICLNWDAFIFP
         I L+W A   P
Subjt:  DICLNWDAFIFP

A0A438IU54 Putative ribonuclease H protein3.4e-4333.97Show/hide
Query:  SLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMD-LWDGETISWTISFRRLLKEEEISDFQQLLVCLNDAI
        S R PW  I++V+++F  +  + +GNG RI FW D W  D P  ++YP LFR+    N S+   L       W ++FRR L + EI D + L+  L+D  
Subjt:  SLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMD-LWDGETISWTISFRRLLKEEEISDFQQLLVCLNDAI

Query:  VY-EFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEV-FQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD
        +     D+R+W L +SGL+SVKS F  L+ SS  ++    + +W S+ P ++   VW++    +N +++LQ R P  ALSP IC LC+   ES  HLF  
Subjt:  VY-EFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEV-FQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD

Query:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ
        C  +   W +L  + KL W   +S    +     G        +LW     A++  +W+ERN RIF D +      + S    +S W   SK F G  + 
Subjt:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ

Query:  DICLNWDAFIFP
         I L+W A   P
Subjt:  DICLNWDAFIFP

A0A5A7T2Y0 zf-RVT domain-containing protein9.6e-7043.83Show/hide
Query:  AGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMDLWDGETISWTISFRRLLKEEEISDFQQLLVCLND
        +G SLRSPW+NI++ W+  ++LASF LGNG RI F +D W+ + P   ++  LFRIA  P  S +        SW ++FRR L++EEI++FQ LL  L+ 
Subjt:  AGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMDLWDGETISWTISFRRLLKEEEISDFQQLLVCLND

Query:  AIVYEFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEVFQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD
          V    D R WS+E+ G +S KSL  +L  +S ++K +F AI +S  P+RIN L+W+M+F  +  SE+LQ + P + +SPSIC LCL AS++L H+F  
Subjt:  AIVYEFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEVFQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD

Query:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ
        C  S   W ++ S+F L W  D S   +V QLL G ++    +++W    KA+L E+W ERN+RIFHD +    +  ++A L +++WCSL K F  +SIQ
Subjt:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ

Query:  DICLNWDA
        DICLNW+A
Subjt:  DICLNWDA

A0A5D3DE60 zf-RVT domain-containing protein1.1e-6842.9Show/hide
Query:  AGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMDLWDGETISWTISFRRLLKEEEISDFQQLLVCLND
        +G SLRS W+NI++ W+  ++LASF LGNG RI F +D W+ + P   ++  LF IA  P    +        SW ++FRR L++EEI++FQ LL  L+ 
Subjt:  AGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMDLWDGETISWTISFRRLLKEEEISDFQQLLVCLND

Query:  AIVYEFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEVFQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD
          V    D R WS+E+ G +S KSL  +L  +S ++K +F AI +S  P+RIN L+W+M+F  +N SE+LQ + P + +SPSIC LCL AS++L H+F  
Subjt:  AIVYEFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEVFQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFD

Query:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ
        C  S   W ++ S+F L W  D S   +V QLL G ++    +++W    KA+L E+W ERN+RIFHD +    +  ++A L +++WCSL K F  +SIQ
Subjt:  CVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFSGFSIQ

Query:  DICLNWDAFI
        DICLNW+ F+
Subjt:  DICLNWDAFI

SwissProt top hitse value%identityAlignment
F4HW51 Protein CHROMATIN REMODELING 202.0e-1653Show/hide
Query:  MLEDVTTERRTELLAKWRATSGVFLIGYSALGNSSLGRHVKDRHMAKENYHTLY---DILACDEAHMIKNTKADITQALKREGNFGRRAQLAGRTPQRRV
        ML DV+ ERR +LL KWR   GVFL+GY+   N SLGR VKD + A+   + L    DIL CDEAH+IKNTKAD TQALK +    RR  L G   Q  +
Subjt:  MLEDVTTERRTELLAKWRATSGVFLIGYSALGNSSLGRHVKDRHMAKENYHTLY---DILACDEAHMIKNTKADITQALKREGNFGRRAQLAGRTPQRRV

Arabidopsis top hitse value%identityAlignment
AT1G08600.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.4e-1753Show/hide
Query:  MLEDVTTERRTELLAKWRATSGVFLIGYSALGNSSLGRHVKDRHMAKENYHTLY---DILACDEAHMIKNTKADITQALKREGNFGRRAQLAGRTPQRRV
        ML DV+ ERR +LL KWR   GVFL+GY+   N SLGR VKD + A+   + L    DIL CDEAH+IKNTKAD TQALK +    RR  L G   Q  +
Subjt:  MLEDVTTERRTELLAKWRATSGVFLIGYSALGNSSLGRHVKDRHMAKENYHTLY---DILACDEAHMIKNTKADITQALKREGNFGRRAQLAGRTPQRRV

AT1G08600.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.4e-1753Show/hide
Query:  MLEDVTTERRTELLAKWRATSGVFLIGYSALGNSSLGRHVKDRHMAKENYHTLY---DILACDEAHMIKNTKADITQALKREGNFGRRAQLAGRTPQRRV
        ML DV+ ERR +LL KWR   GVFL+GY+   N SLGR VKD + A+   + L    DIL CDEAH+IKNTKAD TQALK +    RR  L G   Q  +
Subjt:  MLEDVTTERRTELLAKWRATSGVFLIGYSALGNSSLGRHVKDRHMAKENYHTLY---DILACDEAHMIKNTKADITQALKREGNFGRRAQLAGRTPQRRV

AT1G08600.4 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.4e-1753Show/hide
Query:  MLEDVTTERRTELLAKWRATSGVFLIGYSALGNSSLGRHVKDRHMAKENYHTLY---DILACDEAHMIKNTKADITQALKREGNFGRRAQLAGRTPQRRV
        ML DV+ ERR +LL KWR   GVFL+GY+   N SLGR VKD + A+   + L    DIL CDEAH+IKNTKAD TQALK +    RR  L G   Q  +
Subjt:  MLEDVTTERRTELLAKWRATSGVFLIGYSALGNSSLGRHVKDRHMAKENYHTLY---DILACDEAHMIKNTKADITQALKREGNFGRRAQLAGRTPQRRV

AT3G25270.1 Ribonuclease H-like superfamily protein6.4e-1027.33Show/hide
Query:  EVFQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFDCVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPS
        E+   IWK K   +I   +W ++ G L   + L+ R   H  +   CH C    E+ QHLFFDC Y+ Q W +   I                +LL+   
Subjt:  EVFQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICHLCLNASESLQHLFFDCVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPS

Query:  VKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSW
        +      L++  +  +L  LW  RN+ +F   S+ W +    AR     W
Subjt:  VKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSW

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.9e-0825.94Show/hide
Query:  KLGNGSRIAFWLDSWIEDLPFCSKYPSLF-RIASLP-NASVMDLWDGETISWTISFRRLLKEEEISDFQQLLVCLNDAIVYEFSDSRIWSLENSGLYSVK
        ++G+G    FW D+WI   P       L  R   LP +A V D   G   SW I+  R  +   I   + LL      +  +  DS +W  +   L++  
Subjt:  KLGNGSRIAFWLDSWIEDLPFCSKYPSLF-RIASLP-NASVMDLWDGETISWTISFRRLLKEEEISDFQQLLVCLNDAIVYEFSDSRIWSLENSGLYSVK

Query:  SLFNYLAASSSINKEV-----FQAIW-KSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALS-PSICHLCLNASESLQHLFFDCVYSYQCW--------
        + F+     S+++ +       +A+W K+  PK   F+ WV+ +  L+     + RL +  LS P+ C LC    +S  HLFF+C +S   W        
Subjt:  SLFNYLAASSSINKEV-----FQAIW-KSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALS-PSICHLCLNASESLQHLFFDCVYSYQCW--------

Query:  ----GKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDIS
             +L+    L+W L  S + N+  ++         +L + + V A+    W ERN+R+   +S
Subjt:  ----GKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGAAGACGTAACAACGGAGAGAAGGACGGAGTTGCTTGCTAAATGGAGAGCTACGAGTGGTGTCTTTTTAATTGGCTATAGTGCTTTGGGAAATTCTTCACTTGG
TAGACATGTCAAGGACCGACACATGGCTAAAGAAAATTACCATACCTTGTACGATATTCTTGCATGTGATGAGGCCCACATGATTAAGAACACCAAGGCTGATATAACTC
AGGCATTGAAAAGAGAGGGAAACTTTGGAAGAAGGGCACAACTCGCGGGTCGAACTCCTCAAAGAAGGGTTCATATCGTCTCAGGTCAAGATTTGTGGGTCGTGGAGCAC
AAAGGACAAAACTCGCTTGACAAAACACTTGGTTGTGGCTTCCACCTTGTTTGCTCACACCATGTTCTTCATTCATGTCAATTGCGCCTTCTTCCTCTTCATCATGCTGG
CCTGAGCCTTCGAAGTCCTTGGATTAATATTTCTAAGGTATGGAAACAATTTGAGAATTTAGCTTCATTTAAACTTGGTAATGGTTCTAGAATTGCCTTCTGGCTTGATT
CTTGGATTGAAGATCTTCCTTTTTGTTCAAAGTATCCTAGTTTATTTCGGATTGCTTCTCTTCCTAATGCCTCCGTTATGGATCTTTGGGATGGGGAGACTATTTCATGG
ACCATTTCATTTCGTCGGCTTCTCAAAGAGGAAGAAATTTCTGATTTTCAGCAGTTGTTGGTGTGTTTAAATGATGCCATTGTATATGAGTTTTCAGATTCCCGCATTTG
GTCTCTTGAGAATTCGGGACTTTATTCGGTTAAGTCCCTTTTTAACTACTTGGCAGCCTCCTCTTCGATTAACAAGGAAGTGTTTCAAGCTATTTGGAAATCTAAATGCC
CTAAGAGAATTAATTTTCTTGTTTGGGTTATGATTTTTGGGACTCTAAATTGTTCAGAAGTTCTTCAAAGTAGGCTTCCTTCTCATGCATTATCTCCTTCTATTTGCCAT
TTATGTTTGAATGCCAGTGAATCTTTGCAGCATTTGTTCTTCGATTGTGTTTATTCCTATCAGTGTTGGGGAAAGCTATTGTCTATTTTCAAGCTTCATTGGGCTTTGGA
TCAATCATTCAAAGGAAATGTGCAGCAGCTTTTAGTTGGTCCTTCAGTTAAGCCGATATCTAAATTGCTTTGGTCTAATGGGGTCAAAGCCGTTTTATCAGAACTTTGGT
TTGAAAGAAATCGGAGAATTTTTCATGATATTTCTCTTCCTTGGGTGGATCGTTTTTACTCTGCTCGGCTCAAATCTTCGTCTTGGTGTTCTTTGTCCAAACATTTTTCA
GGATTCTCCATTCAAGATATTTGCCTCAACTGGGATGCTTTTATTTTTCCATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGGAAGACGTAACAACGGAGAGAAGGACGGAGTTGCTTGCTAAATGGAGAGCTACGAGTGGTGTCTTTTTAATTGGCTATAGTGCTTTGGGAAATTCTTCACTTGG
TAGACATGTCAAGGACCGACACATGGCTAAAGAAAATTACCATACCTTGTACGATATTCTTGCATGTGATGAGGCCCACATGATTAAGAACACCAAGGCTGATATAACTC
AGGCATTGAAAAGAGAGGGAAACTTTGGAAGAAGGGCACAACTCGCGGGTCGAACTCCTCAAAGAAGGGTTCATATCGTCTCAGGTCAAGATTTGTGGGTCGTGGAGCAC
AAAGGACAAAACTCGCTTGACAAAACACTTGGTTGTGGCTTCCACCTTGTTTGCTCACACCATGTTCTTCATTCATGTCAATTGCGCCTTCTTCCTCTTCATCATGCTGG
CCTGAGCCTTCGAAGTCCTTGGATTAATATTTCTAAGGTATGGAAACAATTTGAGAATTTAGCTTCATTTAAACTTGGTAATGGTTCTAGAATTGCCTTCTGGCTTGATT
CTTGGATTGAAGATCTTCCTTTTTGTTCAAAGTATCCTAGTTTATTTCGGATTGCTTCTCTTCCTAATGCCTCCGTTATGGATCTTTGGGATGGGGAGACTATTTCATGG
ACCATTTCATTTCGTCGGCTTCTCAAAGAGGAAGAAATTTCTGATTTTCAGCAGTTGTTGGTGTGTTTAAATGATGCCATTGTATATGAGTTTTCAGATTCCCGCATTTG
GTCTCTTGAGAATTCGGGACTTTATTCGGTTAAGTCCCTTTTTAACTACTTGGCAGCCTCCTCTTCGATTAACAAGGAAGTGTTTCAAGCTATTTGGAAATCTAAATGCC
CTAAGAGAATTAATTTTCTTGTTTGGGTTATGATTTTTGGGACTCTAAATTGTTCAGAAGTTCTTCAAAGTAGGCTTCCTTCTCATGCATTATCTCCTTCTATTTGCCAT
TTATGTTTGAATGCCAGTGAATCTTTGCAGCATTTGTTCTTCGATTGTGTTTATTCCTATCAGTGTTGGGGAAAGCTATTGTCTATTTTCAAGCTTCATTGGGCTTTGGA
TCAATCATTCAAAGGAAATGTGCAGCAGCTTTTAGTTGGTCCTTCAGTTAAGCCGATATCTAAATTGCTTTGGTCTAATGGGGTCAAAGCCGTTTTATCAGAACTTTGGT
TTGAAAGAAATCGGAGAATTTTTCATGATATTTCTCTTCCTTGGGTGGATCGTTTTTACTCTGCTCGGCTCAAATCTTCGTCTTGGTGTTCTTTGTCCAAACATTTTTCA
GGATTCTCCATTCAAGATATTTGCCTCAACTGGGATGCTTTTATTTTTCCATCTTAG
Protein sequenceShow/hide protein sequence
MLEDVTTERRTELLAKWRATSGVFLIGYSALGNSSLGRHVKDRHMAKENYHTLYDILACDEAHMIKNTKADITQALKREGNFGRRAQLAGRTPQRRVHIVSGQDLWVVEH
KGQNSLDKTLGCGFHLVCSHHVLHSCQLRLLPLHHAGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIASLPNASVMDLWDGETISW
TISFRRLLKEEEISDFQQLLVCLNDAIVYEFSDSRIWSLENSGLYSVKSLFNYLAASSSINKEVFQAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICH
LCLNASESLQHLFFDCVYSYQCWGKLLSIFKLHWALDQSFKGNVQQLLVGPSVKPISKLLWSNGVKAVLSELWFERNRRIFHDISLPWVDRFYSARLKSSSWCSLSKHFS
GFSIQDICLNWDAFIFPS