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Lag0020541 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020541
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionNAC domain-containing protein
Genome locationchr7:188658..192750
RNA-Seq ExpressionLag0020541
SyntenyLag0020541
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026577.1 Monothiol glutaredoxin-S17 [Cucurbita argyrosperma subsp. argyrosperma]6.5e-3473.68Show/hide
Query:  SSLDLNDALGSRSDLISCQRNKADNHYPGGNGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMAAE
        +S D+  A  SRSDLIS QRNK +NHY GGNGN+ASSKK +ELTN EK RIDLQKEVLTA+FNASEEPEEELPRRTVPRMK+  A   L+SEPFKDM AE
Subjt:  SSLDLNDALGSRSDLISCQRNKADNHYPGGNGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMAAE

Query:  CEKRVEYKEQTSSD
         EKRVEY+E+ S D
Subjt:  CEKRVEYKEQTSSD

XP_004134709.1 putative nuclear RNA export factor SDE5 [Cucumis sativus]2.9e-3472.41Show/hide
Query:  SLDLNDALGSRSDLISCQRNKADNHYPGG---NGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMA
        S D+  A  SRSD ISCQRNKA+NHYPGG   NGN+ASSKK +ELTNLEKTR DLQKEVLTA++NASEEPEEE PRRTVPR K+ GA+G+LVSEPFKD+ 
Subjt:  SLDLNDALGSRSDLISCQRNKADNHYPGG---NGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMA

Query:  AECEKRVEYKEQTSSD
        AE EK VEY +Q   D
Subjt:  AECEKRVEYKEQTSSD

XP_023003172.1 putative nuclear RNA export factor SDE5 [Cucurbita maxima]6.5e-3473.68Show/hide
Query:  SSLDLNDALGSRSDLISCQRNKADNHYPGGNGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMAAE
        +S D+  A  SRSDLIS QRNK +NHY GGNGN+ASSKK +ELTN EK RIDLQKEVLTA+FNASEEPEEELPRRTVPRMK+  A   L+SEPFKDM AE
Subjt:  SSLDLNDALGSRSDLISCQRNKADNHYPGGNGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMAAE

Query:  CEKRVEYKEQTSSD
         EKRVEY+E+ S D
Subjt:  CEKRVEYKEQTSSD

XP_023518772.1 putative nuclear RNA export factor SDE5 [Cucurbita pepo subsp. pepo]6.5e-3473.68Show/hide
Query:  SSLDLNDALGSRSDLISCQRNKADNHYPGGNGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMAAE
        +S D+  A  SRSDLIS QRNK +NHY GGNGN+ASSKK +ELTN EK RIDLQKEVLTA+FNASEEPEEELPRRTVPRMK+  A   L+SEPFKDM AE
Subjt:  SSLDLNDALGSRSDLISCQRNKADNHYPGGNGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMAAE

Query:  CEKRVEYKEQTSSD
         EKRVEY+E+ S D
Subjt:  CEKRVEYKEQTSSD

XP_038881794.1 putative nuclear RNA export factor SDE5 [Benincasa hispida]4.5e-3574.34Show/hide
Query:  SLDLNDALGSRSDLISCQRNKADNHYPGGNGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMAAEC
        S D+  A  SRSDLISCQRNKADNHY GGNGNMASSKK +ELTNLEKTR DLQKE+L A+F+ASEEPEEE PRRTVPR K+  A+G+LVSEPF+DM AE 
Subjt:  SLDLNDALGSRSDLISCQRNKADNHYPGGNGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMAAEC

Query:  EKRVEYKEQTSSD
        EK V+YKEQ   D
Subjt:  EKRVEYKEQTSSD

TrEMBL top hitse value%identityAlignment
A0A0A0KNB3 DUF1771 domain-containing protein1.4e-3472.41Show/hide
Query:  SLDLNDALGSRSDLISCQRNKADNHYPGG---NGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMA
        S D+  A  SRSD ISCQRNKA+NHYPGG   NGN+ASSKK +ELTNLEKTR DLQKEVLTA++NASEEPEEE PRRTVPR K+ GA+G+LVSEPFKD+ 
Subjt:  SLDLNDALGSRSDLISCQRNKADNHYPGG---NGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMA

Query:  AECEKRVEYKEQTSSD
        AE EK VEY +Q   D
Subjt:  AECEKRVEYKEQTSSD

A0A1S3B0H0 putative nuclear RNA export factor SDE5 isoform X11.2e-3371.55Show/hide
Query:  SLDLNDALGSRSDLISCQRNKADNHYPGG---NGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMA
        S D   A  SRS  ISCQRNKA+NHYPGG   NGN+ASSKK +E+TNLEKTR DLQKEVLTA+FNASEEPEEE PRR VPR K+ GA+G+LVSEPFKD+ 
Subjt:  SLDLNDALGSRSDLISCQRNKADNHYPGG---NGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMA

Query:  AECEKRVEYKEQTSSD
        AE EKRVEY +Q   D
Subjt:  AECEKRVEYKEQTSSD

A0A5A7UAB4 Putative nuclear RNA export factor SDE5 isoform X11.2e-3371.55Show/hide
Query:  SLDLNDALGSRSDLISCQRNKADNHYPGG---NGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMA
        S D   A  SRS  ISCQRNKA+NHYPGG   NGN+ASSKK +E+TNLEKTR DLQKEVLTA+FNASEEPEEE PRR VPR K+ GA+G+LVSEPFKD+ 
Subjt:  SLDLNDALGSRSDLISCQRNKADNHYPGG---NGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMA

Query:  AECEKRVEYKEQTSSD
        AE EKRVEY +Q   D
Subjt:  AECEKRVEYKEQTSSD

A0A5D3CP54 Putative nuclear RNA export factor SDE5 isoform X17.0e-3472.41Show/hide
Query:  SLDLNDALGSRSDLISCQRNKADNHYPGG---NGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMA
        S D   A  SRS  ISCQRNKA+NHYPGG   NGN+ASSKK +ELTNLEKTR DLQKEVLTA+FNASEEPEEE PRR VPR K+ GA+G+LVSEPFKD+ 
Subjt:  SLDLNDALGSRSDLISCQRNKADNHYPGG---NGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMA

Query:  AECEKRVEYKEQTSSD
        AE EKRVEY +Q   D
Subjt:  AECEKRVEYKEQTSSD

A0A6J1KLP7 putative nuclear RNA export factor SDE53.1e-3473.68Show/hide
Query:  SSLDLNDALGSRSDLISCQRNKADNHYPGGNGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMAAE
        +S D+  A  SRSDLIS QRNK +NHY GGNGN+ASSKK +ELTN EK RIDLQKEVLTA+FNASEEPEEELPRRTVPRMK+  A   L+SEPFKDM AE
Subjt:  SSLDLNDALGSRSDLISCQRNKADNHYPGGNGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFKDMAAE

Query:  CEKRVEYKEQTSSD
         EKRVEY+E+ S D
Subjt:  CEKRVEYKEQTSSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCGTTGCCACCCAAGTCTCAAGAAAAACATCCCATGTGCGAGTTCTTTGGATTTAAATGATGCTTTGGGTTCAAGATCAGACTTAATTTCATGTCAGAGAAATAA
GGCCGACAACCATTATCCTGGAGGAAATGGAAATATGGCCTCAAGCAAAAAGGGCGTGGAGTTAACTAACCTGGAAAAGACCAGAATTGATCTTCAAAAGGAGGTTTTGA
CTGCTATATTTAATGCTTCTGAAGAACCAGAAGAGGAGTTACCAAGAAGAACAGTACCAAGGATGAAGCGGCCTGGAGCATTTGGACGGTTGGTGAGTGAACCATTCAAA
GACATGGCTGCAGAGTGTGAGAAGCGTGTGGAGTACAAGGAGCAGACTAGTTCGGATGGTTTAACCAAGAGGAAAATACCCCCCCGAATGCTCTCTCCTCTCTTTCCCTC
CCGTCAGCCTTCATCCGCCGGATCAGTGTTTGTTCTTAGCCTTCATCCATTGAATCGTGCTTCAGCTTGTCTACTGGTTATTGTCGTTGTTGTTTTGTCTCTTTCTGGCT
TTTTCATCCTCATTTTTCTATGGAAGTCATCAGTTGCTGCAAAAGCAGTTTCTAAACTGATTAAAGTTGTCAGACCATCTGCAACATTAAATAAAGACATTGTTGAAGAC
CAACAAAGTGAAGTTGAGAATCGCGTAGCATACAGATCCAAGTCAACTGGCCATGGATCTCTTGAGAGTCGAGGAAAGTGTTCAAGTATCCTGACTATAAAATGCTTTCA
CCACAAATCAAGTCCAGCATCAGCCTATGTTGCCAGAGCATGTATAGGCTTCATTTTGTTCGTCACAGTTGCAAAACAAGTGCTGCTGCATCATACCAATGGAGATAGTT
GTCTTTCTTTATATATTCACGACATTCTTCTCTTTTGGGACTTTGTTGGGAATGCGACTAAAGTCTCATATGGACTAGATAATGGAAGATCATGTGCTTATAAGGTTTAC
AAGGATGACATGTCTTGTTCTCATCCTAACAAGTATTCTAGAGAGAAGTGGAATAGTTGTAGGCTTCTCATGGAGTCGGTGAGTTCAAGTGGCAATGCCGAAGCAGTAGA
GCCTCGGAAGTCAAAATTTCCTCGCCCCCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCGTTGCCACCCAAGTCTCAAGAAAAACATCCCATGTGCGAGTTCTTTGGATTTAAATGATGCTTTGGGTTCAAGATCAGACTTAATTTCATGTCAGAGAAATAA
GGCCGACAACCATTATCCTGGAGGAAATGGAAATATGGCCTCAAGCAAAAAGGGCGTGGAGTTAACTAACCTGGAAAAGACCAGAATTGATCTTCAAAAGGAGGTTTTGA
CTGCTATATTTAATGCTTCTGAAGAACCAGAAGAGGAGTTACCAAGAAGAACAGTACCAAGGATGAAGCGGCCTGGAGCATTTGGACGGTTGGTGAGTGAACCATTCAAA
GACATGGCTGCAGAGTGTGAGAAGCGTGTGGAGTACAAGGAGCAGACTAGTTCGGATGGTTTAACCAAGAGGAAAATACCCCCCCGAATGCTCTCTCCTCTCTTTCCCTC
CCGTCAGCCTTCATCCGCCGGATCAGTGTTTGTTCTTAGCCTTCATCCATTGAATCGTGCTTCAGCTTGTCTACTGGTTATTGTCGTTGTTGTTTTGTCTCTTTCTGGCT
TTTTCATCCTCATTTTTCTATGGAAGTCATCAGTTGCTGCAAAAGCAGTTTCTAAACTGATTAAAGTTGTCAGACCATCTGCAACATTAAATAAAGACATTGTTGAAGAC
CAACAAAGTGAAGTTGAGAATCGCGTAGCATACAGATCCAAGTCAACTGGCCATGGATCTCTTGAGAGTCGAGGAAAGTGTTCAAGTATCCTGACTATAAAATGCTTTCA
CCACAAATCAAGTCCAGCATCAGCCTATGTTGCCAGAGCATGTATAGGCTTCATTTTGTTCGTCACAGTTGCAAAACAAGTGCTGCTGCATCATACCAATGGAGATAGTT
GTCTTTCTTTATATATTCACGACATTCTTCTCTTTTGGGACTTTGTTGGGAATGCGACTAAAGTCTCATATGGACTAGATAATGGAAGATCATGTGCTTATAAGGTTTAC
AAGGATGACATGTCTTGTTCTCATCCTAACAAGTATTCTAGAGAGAAGTGGAATAGTTGTAGGCTTCTCATGGAGTCGGTGAGTTCAAGTGGCAATGCCGAAGCAGTAGA
GCCTCGGAAGTCAAAATTTCCTCGCCCCCTATGA
Protein sequenceShow/hide protein sequence
MFRCHPSLKKNIPCASSLDLNDALGSRSDLISCQRNKADNHYPGGNGNMASSKKGVELTNLEKTRIDLQKEVLTAIFNASEEPEEELPRRTVPRMKRPGAFGRLVSEPFK
DMAAECEKRVEYKEQTSSDGLTKRKIPPRMLSPLFPSRQPSSAGSVFVLSLHPLNRASACLLVIVVVVLSLSGFFILIFLWKSSVAAKAVSKLIKVVRPSATLNKDIVED
QQSEVENRVAYRSKSTGHGSLESRGKCSSILTIKCFHHKSSPASAYVARACIGFILFVTVAKQVLLHHTNGDSCLSLYIHDILLFWDFVGNATKVSYGLDNGRSCAYKVY
KDDMSCSHPNKYSREKWNSCRLLMESVSSSGNAEAVEPRKSKFPRPL