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Lag0020543 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020543
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:224182..228984
RNA-Seq ExpressionLag0020543
SyntenyLag0020543
Gene Ontology termsGO:0071897 - DNA biosynthetic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0034061 - DNA polymerase activity (molecular function)
GO:0140096 - catalytic activity, acting on a protein (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN65498.1 hypothetical protein VITISV_028324 [Vitis vinifera]1.2e-0937.8Show/hide
Query:  LSPLLLKDLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLRVDTHLVNWKTSS
        ++ +L   L+ V+  +++N++ AFVEGRQILDA+LVA+EA+   K  +  G V KL+ EKAYD  S+  +    K +    + G   R   HLV W+   
Subjt:  LSPLLLKDLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLRVDTHLVNWKTSS

Query:  LPVHHVVSLGLTLLNSSNSTLLIEWWW
            H   LGL  L   N  LL +W W
Subjt:  LPVHHVVSLGLTLLNSSNSTLLIEWWW

CAN66499.1 hypothetical protein VITISV_010636 [Vitis vinifera]1.8e-0833.54Show/hide
Query:  RECARITASEFNLSPLLLKDLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDL---------------
        R  + IT+    +  +L   LR VL   I +T+ AFV+GRQILD +L+A+E V E +   E G + K++ EKA+D   K DL+ L               
Subjt:  RECARITASEFNLSPLLLKDLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDL---------------

Query:  ----EKQIRDFFWVGGDLRVDTHLVNWKTSSLPVHHVVSLGLTLLNSSNSTLLIEWWW
            E+  RDF W G       HLV W     P   +  LG   ++  N  LL +W W
Subjt:  ----EKQIRDFFWVGGDLRVDTHLVNWKTSSLPVHHVVSLGLTLLNSSNSTLLIEWWW

CAN67967.1 hypothetical protein VITISV_002799 [Vitis vinifera]4.0e-0835.82Show/hide
Query:  EFNLSPLLLKDLRKVLPN----IIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLRVDTHL
        +F++   L K L KVL N    +++  + AFVEGRQILD +L+A+EA+  +    E G + KL  EKAYD                    GG+L    HL
Subjt:  EFNLSPLLLKDLRKVLPN----IIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLRVDTHL

Query:  VNWKTSSLPVHHVVSLGLTLLNSSNSTLLIEWWW
        V WK   L       LG+  L++ N  LL +W W
Subjt:  VNWKTSSLPVHHVVSLGLTLLNSSNSTLLIEWWW

CAN78255.1 hypothetical protein VITISV_031956 [Vitis vinifera]3.8e-1137.8Show/hide
Query:  LSPLLLKDLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLRVDTHLVNWKTSS
        L+ +L   L+K++  +++  + AFVEGRQILD +L+A+EA+  +     +G + KL+ EKAY+  S+     LEK  RDF W GG L     LV W    
Subjt:  LSPLLLKDLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLRVDTHLVNWKTSS

Query:  LPVHHVVSLGLTLLNSSNSTLLIEWWW
        L       L +  LNS N  L+ +W W
Subjt:  LPVHHVVSLGLTLLNSSNSTLLIEWWW

CAN80946.1 hypothetical protein VITISV_028361 [Vitis vinifera]1.5e-0738.89Show/hide
Query:  RECARITASEFNLSPLLLKDLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLR
        R  + IT+    ++ +L + LR VL   I +T+ +FV+GRQILDA+L+A+E V E +   E G V K++ EKAYD         +E+  RDF W      
Subjt:  RECARITASEFNLSPLLLKDLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLR

Query:  VDTHLVNW
           HLV+W
Subjt:  VDTHLVNW

TrEMBL top hitse value%identityAlignment
A5ASN4 Reverse transcriptase domain-containing protein1.9e-1137.8Show/hide
Query:  LSPLLLKDLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLRVDTHLVNWKTSS
        L+ +L   L+K++  +++  + AFVEGRQILD +L+A+EA+  +     +G + KL+ EKAY+  S+     LEK  RDF W GG L     LV W    
Subjt:  LSPLLLKDLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLRVDTHLVNWKTSS

Query:  LPVHHVVSLGLTLLNSSNSTLLIEWWW
        L       L +  LNS N  L+ +W W
Subjt:  LPVHHVVSLGLTLLNSSNSTLLIEWWW

A5BA51 UBP-type domain-containing protein7.3e-0838.89Show/hide
Query:  RECARITASEFNLSPLLLKDLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLR
        R  + IT+    ++ +L + LR VL   I +T+ +FV+GRQILDA+L+A+E V E +   E G V K++ EKAYD         +E+  RDF W      
Subjt:  RECARITASEFNLSPLLLKDLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLR

Query:  VDTHLVNW
           HLV+W
Subjt:  VDTHLVNW

A5BD04 Uncharacterized protein6.0e-1037.8Show/hide
Query:  LSPLLLKDLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLRVDTHLVNWKTSS
        ++ +L   L+ V+  +++N++ AFVEGRQILDA+LVA+EA+   K  +  G V KL+ EKAYD  S+  +    K +    + G   R   HLV W+   
Subjt:  LSPLLLKDLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLRVDTHLVNWKTSS

Query:  LPVHHVVSLGLTLLNSSNSTLLIEWWW
            H   LGL  L   N  LL +W W
Subjt:  LPVHHVVSLGLTLLNSSNSTLLIEWWW

A5BII6 Uncharacterized protein1.9e-0835.82Show/hide
Query:  EFNLSPLLLKDLRKVLPN----IIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLRVDTHL
        +F++   L K L KVL N    +++  + AFVEGRQILD +L+A+EA+  +    E G + KL  EKAYD                    GG+L    HL
Subjt:  EFNLSPLLLKDLRKVLPN----IIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLRVDTHL

Query:  VNWKTSSLPVHHVVSLGLTLLNSSNSTLLIEWWW
        V WK   L       LG+  L++ N  LL +W W
Subjt:  VNWKTSSLPVHHVVSLGLTLLNSSNSTLLIEWWW

A5C916 Reverse transcriptase domain-containing protein8.6e-0933.54Show/hide
Query:  RECARITASEFNLSPLLLKDLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDL---------------
        R  + IT+    +  +L   LR VL   I +T+ AFV+GRQILD +L+A+E V E +   E G + K++ EKA+D   K DL+ L               
Subjt:  RECARITASEFNLSPLLLKDLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDL---------------

Query:  ----EKQIRDFFWVGGDLRVDTHLVNWKTSSLPVHHVVSLGLTLLNSSNSTLLIEWWW
            E+  RDF W G       HLV W     P   +  LG   ++  N  LL +W W
Subjt:  ----EKQIRDFFWVGGDLRVDTHLVNWKTSSLPVHHVVSLGLTLLNSSNSTLLIEWWW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAAACCAAGGCCACTCCTAGCAAGCAAAATGTGCCTGCATCACCACCTCATCCTGAAGCGCCAGGTCCGACGCTGCGAGACTTTCCGGAATTATTAGGGCACGC
AACGCGACAGCGTCACGACACTGTCGCACAGAATGGGCAGTATAAATTTGTAGCAATACAGCGGCTGAGGGAGAGCTTCTTTGGGAGAAAAAGACGATTACAGAGAGCAG
AAAACGACCAGAACACAGAGGCGATTGAAGGGAGCTTAATTTTGGAGCTTAGACGGGAATGCGCGCGAATCACGGCTAGCGAGTTTAATCTTTCTCCTTTACTTCTTAAA
GACTTAAGGAAAGTGTTACCTAACATTATTGCAAACACTCGAGCGGCCTTTGTGGAAGGGAGACAAATTCTTGATGCCATTTTAGTGGCTTCAGAAGCAGTAGGGGAGTT
GAAAGCTAAGATAGAGTTGGGCTACGTTTTGAAGCTTAATGATGAGAAAGCTTATGACAAGAGCTCCAAAGGGGATCTAAAGGACTTGGAGAAGCAAATTAGAGATTTTT
TTTGGGTTGGAGGAGATTTGAGAGTCGATACTCACCTTGTGAATTGGAAGACCTCTTCCCTCCCCGTTCACCATGTGGTGTCCTTGGGATTGACTCTCTTGAACAGTTCA
AATTCAACTCTGCTCATTGAATGGTGGTGGCCACCATTTCTCTATAGAGAAATATGCCTTTTGGACGCAAGTGGTGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAAAACCAAGGCCACTCCTAGCAAGCAAAATGTGCCTGCATCACCACCTCATCCTGAAGCGCCAGGTCCGACGCTGCGAGACTTTCCGGAATTATTAGGGCACGC
AACGCGACAGCGTCACGACACTGTCGCACAGAATGGGCAGTATAAATTTGTAGCAATACAGCGGCTGAGGGAGAGCTTCTTTGGGAGAAAAAGACGATTACAGAGAGCAG
AAAACGACCAGAACACAGAGGCGATTGAAGGGAGCTTAATTTTGGAGCTTAGACGGGAATGCGCGCGAATCACGGCTAGCGAGTTTAATCTTTCTCCTTTACTTCTTAAA
GACTTAAGGAAAGTGTTACCTAACATTATTGCAAACACTCGAGCGGCCTTTGTGGAAGGGAGACAAATTCTTGATGCCATTTTAGTGGCTTCAGAAGCAGTAGGGGAGTT
GAAAGCTAAGATAGAGTTGGGCTACGTTTTGAAGCTTAATGATGAGAAAGCTTATGACAAGAGCTCCAAAGGGGATCTAAAGGACTTGGAGAAGCAAATTAGAGATTTTT
TTTGGGTTGGAGGAGATTTGAGAGTCGATACTCACCTTGTGAATTGGAAGACCTCTTCCCTCCCCGTTCACCATGTGGTGTCCTTGGGATTGACTCTCTTGAACAGTTCA
AATTCAACTCTGCTCATTGAATGGTGGTGGCCACCATTTCTCTATAGAGAAATATGCCTTTTGGACGCAAGTGGTGGCTAG
Protein sequenceShow/hide protein sequence
MMKTKATPSKQNVPASPPHPEAPGPTLRDFPELLGHATRQRHDTVAQNGQYKFVAIQRLRESFFGRKRRLQRAENDQNTEAIEGSLILELRRECARITASEFNLSPLLLK
DLRKVLPNIIANTRAAFVEGRQILDAILVASEAVGELKAKIELGYVLKLNDEKAYDKSSKGDLKDLEKQIRDFFWVGGDLRVDTHLVNWKTSSLPVHHVVSLGLTLLNSS
NSTLLIEWWWPPFLYREICLLDASGG