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Lag0020548 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020548
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box protein At1g67340-like
Genome locationchr7:262726..263520
RNA-Seq ExpressionLag0020548
SyntenyLag0020548
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR044508 - F-box protein At5g50450/At1g67340-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584151.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]6.3e-2389.06Show/hide
Query:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
        +SDKNLR GVALCGRAAY GHIDALRELGHCLQD YGVA+N SEGRRLLIEANAREL SITNSS
Subjt:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
KAG7019742.1 F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-2389.06Show/hide
Query:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
        +SDKNLR GVALCGRAAY GHIDALRELGHCLQD YGVA+N SEGRRLLIEANAREL SITNSS
Subjt:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
XP_022923648.1 F-box protein At5g50450-like [Cucurbita moschata]6.3e-2389.06Show/hide
Query:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
        +SDKNLR GVALCGRAAY GHIDALRELGHCLQD YGVA+N SEGRRLLIEANAREL SITNSS
Subjt:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
XP_023001353.1 F-box protein At1g67340-like [Cucurbita maxima]6.3e-2389.06Show/hide
Query:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
        +SDKNLR GVALCGRAAY GHIDALRELGHCLQD YGVA+N SEGRRLLIEANAREL SITNSS
Subjt:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
XP_023519168.1 F-box protein At5g50450-like [Cucurbita pepo subsp. pepo]6.3e-2389.06Show/hide
Query:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
        +SDKNLR GVALCGRAAY GHIDALRELGHCLQD YGVA+N SEGRRLLIEANAREL SITNSS
Subjt:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
TrEMBL top hitse value%identityAlignment
A0A6J1C663 F-box protein At1g673402.0e-2285.94Show/hide
Query:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
        +SDKNLR GVALCGRAAY GHIDALRELGHCLQD YGVA+N +EGRRLLIEANAREL SI+NSS
Subjt:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
A0A6J1EA77 F-box protein At5g50450-like3.1e-2389.06Show/hide
Query:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
        +SDKNLR GVALCGRAAY GHIDALRELGHCLQD YGVA+N SEGRRLLIEANAREL SITNSS
Subjt:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
A0A6J1GUJ3 F-box protein At5g504503.4e-2287.5Show/hide
Query:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
        +SDKNLR GVALCGRAA  GHIDALRELGHCLQD YGVA+N SEGRRLLIEANAREL SITNSS
Subjt:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
A0A6J1JZ31 F-box protein At5g50450-like3.4e-2287.5Show/hide
Query:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
        +SDKNLR GVALCGRAA  GHIDALRELGHCLQD YGVA+N SEGRRLLIEANAREL SITNSS
Subjt:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
A0A6J1KQ99 F-box protein At1g67340-like3.1e-2389.06Show/hide
Query:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
        +SDKNLR GVALCGRAAY GHIDALRELGHCLQD YGVA+N SEGRRLLIEANAREL SITNSS
Subjt:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSS
SwissProt top hitse value%identityAlignment
Q9FK27 F-box protein At5g504501.2e-1977.19Show/hide
Query:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANAREL
        ++DKNLR GVALC R+AY GH+DALRELGHCLQD YGV  + SEGRRLLI+ANAREL
Subjt:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANAREL
Q9FYF9 F-box protein At1g673408.9e-2058.02Show/hide
Query:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSSSAVSTTRATACLQRIPP
        ++DK+LR GVALC RAA+ GH+DALRELGHCLQD YGV +N SEGRR L++ANAREL ++   SS +        L + PP
Subjt:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSSSAVSTTRATACLQRIPP
Arabidopsis top hitse value%identityAlignment
AT1G67340.1 HCP-like superfamily protein with MYND-type zinc finger6.3e-2158.02Show/hide
Query:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSSSAVSTTRATACLQRIPP
        ++DK+LR GVALC RAA+ GH+DALRELGHCLQD YGV +N SEGRR L++ANAREL ++   SS +        L + PP
Subjt:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSSSAVSTTRATACLQRIPP
AT5G50450.1 HCP-like superfamily protein with MYND-type zinc finger8.3e-2177.19Show/hide
Query:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANAREL
        ++DKNLR GVALC R+AY GH+DALRELGHCLQD YGV  + SEGRRLLI+ANAREL
Subjt:  QSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANAREL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCACATCAATACTGGCCTAAAGGGGCAAAGCGACAAGAATCTCCGTGTTGGTGTGGCTCTGTGCGGACGAGCCGCATATTTCGGCCATATCGACGCGCTTCGTGA
ACTAGGCCACTGCCTTCAAGACAGTTACGGCGTCGCTGAAAACACATCCGAGGGACGTCGTCTCCTAATCGAAGCCAACGCGCGCGAGCTCGAGTCCATAACAAACTCCT
CCTCTGCCGTCTCAACTACTCGGGCGACCGCCTGTCTCCAACGGATTCCGCCGGATCGCTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCCACATCAATACTGGCCTAAAGGGGCAAAGCGACAAGAATCTCCGTGTTGGTGTGGCTCTGTGCGGACGAGCCGCATATTTCGGCCATATCGACGCGCTTCGTGA
ACTAGGCCACTGCCTTCAAGACAGTTACGGCGTCGCTGAAAACACATCCGAGGGACGTCGTCTCCTAATCGAAGCCAACGCGCGCGAGCTCGAGTCCATAACAAACTCCT
CCTCTGCCGTCTCAACTACTCGGGCGACCGCCTGTCTCCAACGGATTCCGCCGGATCGCTCCTAA
Protein sequenceShow/hide protein sequence
MTHINTGLKGQSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSSSAVSTTRATACLQRIPPDRS