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Lag0020558 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020558
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionethylene-responsive transcription factor 13-like
Genome locationchr7:397835..398344
RNA-Seq ExpressionLag0020558
SyntenyLag0020558
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650208.1 hypothetical protein Csa_010866 [Cucumis sativus]1.7e-3466.67Show/hide
Query:  MGSKGSSRLE--ESDLFVLERIRRHLLEDELG-------------NSEGSERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAF
        M S  SS LE   SDLF LE+IRRHLLED+LG                  E+ +   RGLQFRGVRRRPWGKYAAEIRDP++KGARIWLGTYHTAQDAA 
Subjt:  MGSKGSSRLE--ESDLFVLERIRRHLLEDELG-------------NSEGSERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAF

Query:  AYDRAAFQMRGAKAKLNFPHMIAASD
        AYDRAAFQMRGAKAKLNFPH+I++++
Subjt:  AYDRAAFQMRGAKAKLNFPHMIAASD

KAG6597005.1 Ethylene-responsive transcription factor 13, partial [Cucurbita argyrosperma subsp. sororia]4.0e-3656.14Show/hide
Query:  SKGSSRLEESDLFVLERIRRHLLEDELGNSEGSERHK------------------HEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAA
        S+GSS    S++F+LE IRRHLLEDEL +  G  ++                     +RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTY TA++AA
Subjt:  SKGSSRLEESDLFVLERIRRHLLEDELGNSEGSERHK------------------HEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAA

Query:  FAYDRAAFQMRGAKAKLNFPHMIAASDAPAPARTC--KRTINPSADDDPPPPPPPPLFNIVKRPRTTTDDL
         AYDRAAFQMRGAKAKLNFPHMI +++A      C  KR           P  PPPLF+ VKRPRT +  +
Subjt:  FAYDRAAFQMRGAKAKLNFPHMIAASDAPAPARTC--KRTINPSADDDPPPPPPPPLFNIVKRPRTTTDDL

XP_022950239.1 ethylene-responsive transcription factor 1-like [Cucurbita moschata]1.3e-3456.73Show/hide
Query:  SKGSSRLEESDLFVLERIRRHLLEDE-------------LGNSEG-----SERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAA
        S+GSS    S++F+LE IRRHLLEDE             L +S+G     +      +RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTY TA++AA
Subjt:  SKGSSRLEESDLFVLERIRRHLLEDE-------------LGNSEG-----SERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAA

Query:  FAYDRAAFQMRGAKAKLNFPHMIAASDAPAPARTC--KRTINPSADDDPPPPPPPPLFNIVKRPRTTTDDL
         AYDRAAFQMRGAKAKLNFPHMI +++A      C  KR           P  PPPLF+ VKRPRT +  +
Subjt:  FAYDRAAFQMRGAKAKLNFPHMIAASDAPAPARTC--KRTINPSADDDPPPPPPPPLFNIVKRPRTTTDDL

XP_022974259.1 ethylene-responsive transcription factor 13-like [Cucurbita maxima]7.6e-3556.14Show/hide
Query:  SKGSSRLEESDLFVLERIRRHLLEDELGNSEGSERHK------------------HEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAA
        S+GSS    S++F+LE IRRHLLEDEL +  G  ++                     +RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTY TA++AA
Subjt:  SKGSSRLEESDLFVLERIRRHLLEDELGNSEGSERHK------------------HEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAA

Query:  FAYDRAAFQMRGAKAKLNFPHMIAASDAPAPARTC--KRTINPSADDDPPPPPPPPLFNIVKRPRTTTDDL
         AYDRAAFQMRGAKAKLNFPHMI +++A      C  KR           P  PPPLF+ VKRPRT +  +
Subjt:  FAYDRAAFQMRGAKAKLNFPHMIAASDAPAPARTC--KRTINPSADDDPPPPPPPPLFNIVKRPRTTTDDL

XP_023539438.1 ethylene-responsive transcription factor 13-like [Cucurbita pepo subsp. pepo]3.8e-3457.93Show/hide
Query:  SKGSSRLEESDLFVLERIRRHLLEDELGNSEGSERHK------------------HEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAA
        S+GSS    S++F+LE IRRHLLEDEL +  G  ++                     +RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTY TA++AA
Subjt:  SKGSSRLEESDLFVLERIRRHLLEDELGNSEGSERHK------------------HEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAA

Query:  FAYDRAAFQMRGAKAKLNFPHMIAASDAPAPARTCKRTINPSADDDPPPPPPPPLFNIVKRPRT
         AYDRAAFQMRGAKAKLNFPHMI +++A      C    +P       P  PPPLF+ VKRPRT
Subjt:  FAYDRAAFQMRGAKAKLNFPHMIAASDAPAPARTCKRTINPSADDDPPPPPPPPLFNIVKRPRT

TrEMBL top hitse value%identityAlignment
A0A087HKC9 AP2/ERF domain-containing protein1.8e-2959.7Show/hide
Query:  VLERIRRHLLEDELGNSEGSERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASDAPAP
        VL+ IRRHLLED+L     S   K E     F+GVRRRPWGKYAAEIRDPN+ GARIWLGTY TA +AA AYDRAAF+MRGAKAKLNFPH+I+  D+P P
Subjt:  VLERIRRHLLEDELGNSEGSERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASDAPAP

Query:  ARTCKRTINPSADDDPPPPPPPPLFNIVKRPRTT
        AR  KR         P  P P     + KR R T
Subjt:  ARTCKRTINPSADDDPPPPPPPPLFNIVKRPRTT

A0A0A0L893 AP2/ERF domain-containing protein1.9e-3154.19Show/hide
Query:  MGSKGSSRLE--ESDLFVLERIRRHLLEDELG------------------------------------------NSEGSERHKHEVRGLQFRGVRRRPWG
        M S  SS LE   SDLF LE+IRRHLLED+LG                                               E+ +   RGLQFRGVRRRPWG
Subjt:  MGSKGSSRLE--ESDLFVLERIRRHLLEDELG------------------------------------------NSEGSERHKHEVRGLQFRGVRRRPWG

Query:  KYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASD
        KYAAEIRDP++KGARIWLGTYHTAQDAA AYDRAAFQMRGAKAKLNFPH+I++++
Subjt:  KYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASD

A0A5D3DAY8 Putative Ethylene-responsive element binding factor 132.9e-3255.26Show/hide
Query:  SKGSSRLE--ESDLFVLERIRRHLLEDELGNS-----------------------------------------EGSERHKHEVRGLQFRGVRRRPWGKYA
        S  SS LE   SDLF+LE+IRRHLLED+LG                                             +   K   RGLQFRGVRRRPWGKYA
Subjt:  SKGSSRLE--ESDLFVLERIRRHLLEDELGNS-----------------------------------------EGSERHKHEVRGLQFRGVRRRPWGKYA

Query:  AEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASD
        AEIRDP+RKGARIWLGTYHTAQDAA AYDRAAFQMRGAKAKLNFPH+I++++
Subjt:  AEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASD

A0A6J1GF81 ethylene-responsive transcription factor 1-like6.3e-3556.73Show/hide
Query:  SKGSSRLEESDLFVLERIRRHLLEDE-------------LGNSEG-----SERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAA
        S+GSS    S++F+LE IRRHLLEDE             L +S+G     +      +RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTY TA++AA
Subjt:  SKGSSRLEESDLFVLERIRRHLLEDE-------------LGNSEG-----SERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAA

Query:  FAYDRAAFQMRGAKAKLNFPHMIAASDAPAPARTC--KRTINPSADDDPPPPPPPPLFNIVKRPRTTTDDL
         AYDRAAFQMRGAKAKLNFPHMI +++A      C  KR           P  PPPLF+ VKRPRT +  +
Subjt:  FAYDRAAFQMRGAKAKLNFPHMIAASDAPAPARTC--KRTINPSADDDPPPPPPPPLFNIVKRPRTTTDDL

A0A6J1IH30 ethylene-responsive transcription factor 13-like3.7e-3556.14Show/hide
Query:  SKGSSRLEESDLFVLERIRRHLLEDELGNSEGSERHK------------------HEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAA
        S+GSS    S++F+LE IRRHLLEDEL +  G  ++                     +RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTY TA++AA
Subjt:  SKGSSRLEESDLFVLERIRRHLLEDELGNSEGSERHK------------------HEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAA

Query:  FAYDRAAFQMRGAKAKLNFPHMIAASDAPAPARTC--KRTINPSADDDPPPPPPPPLFNIVKRPRTTTDDL
         AYDRAAFQMRGAKAKLNFPHMI +++A      C  KR           P  PPPLF+ VKRPRT +  +
Subjt:  FAYDRAAFQMRGAKAKLNFPHMIAASDAPAPARTC--KRTINPSADDDPPPPPPPPLFNIVKRPRTTTDDL

SwissProt top hitse value%identityAlignment
Q40476 Ethylene-responsive transcription factor 11.8e-2363.1Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASDAPAPAR-TCKRTINP
        RG  +RGVRRRPWGK+AAEIRDP + GAR+WLGTY T ++AA AYD+AA++MRG+KA LNFPH I  ++ P P R T KR  +P
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASDAPAPAR-TCKRTINP

Q40479 Ethylene-responsive transcription factor 21.2e-2263.75Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASDAPAPAR-TCKR
        +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGTY TA++AA AYD+AA++MRG+KA LNFPH I  ++ P P R T KR
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASDAPAPAR-TCKR

Q84XB3 Ethylene-responsive transcription factor 12.0e-2260.47Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASDAPAPAR-TCKRTINPSA
        +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGTY +A++AA AY +AAF+MRG KA LNFPH I  ++ P P R T KR ++ SA
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASDAPAPAR-TCKRTINPSA

Q8L9K1 Ethylene-responsive transcription factor 131.4e-2658.59Show/hide
Query:  SEGSERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASD-APAPARTCKRTINPSADD
        ++ S  H    +G+Q+RGVRRRPWGK+AAEIRDP + GAR+WLGTY T +DAA AYDRAAFQ+RG+KAKLNFPH+I +    P   R  +R+  PS  D
Subjt:  SEGSERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASD-APAPARTCKRTINPSADD

Q9LW50 Ethylene-responsive transcription factor 24.5e-2254.55Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASDAPAPAR-TCKR--------TINPSADDDPP
        +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGTY TA++AA AYD+AA++MRG+KA LNFPH I  ++ P P R T KR        +I+P++++  P
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASDAPAPAR-TCKR--------TINPSADDDPP

Arabidopsis top hitse value%identityAlignment
AT2G33710.1 Integrase-type DNA-binding superfamily protein1.0e-2147.52Show/hide
Query:  SRLEESDL--FVLERIRRHL---LEDELGNSEGSERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKL
        S L ESD+  FV E   + +   ++D+  +S  + + K   R   +RGVR+RPWGK+AAEIRDPN K AR+WLGT+ TA++AA AYD+AAF+ RG KAKL
Subjt:  SRLEESDL--FVLERIRRHL---LEDELGNSEGSERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKL

Query:  NFPHMIAASDA---PAPARTCKRTINPSADDDPPPPPPPPL
        NFP  I  +     P+PA +  R I        PP PPPP+
Subjt:  NFPHMIAASDA---PAPARTCKRTINPSADDDPPPPPPPPL

AT2G33710.2 Integrase-type DNA-binding superfamily protein1.0e-2147.52Show/hide
Query:  SRLEESDL--FVLERIRRHL---LEDELGNSEGSERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKL
        S L ESD+  FV E   + +   ++D+  +S  + + K   R   +RGVR+RPWGK+AAEIRDPN K AR+WLGT+ TA++AA AYD+AAF+ RG KAKL
Subjt:  SRLEESDL--FVLERIRRHL---LEDELGNSEGSERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKL

Query:  NFPHMIAASDA---PAPARTCKRTINPSADDDPPPPPPPPL
        NFP  I  +     P+PA +  R I        PP PPPP+
Subjt:  NFPHMIAASDA---PAPARTCKRTINPSADDDPPPPPPPPL

AT2G44840.1 ethylene-responsive element binding factor 139.6e-2858.59Show/hide
Query:  SEGSERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASD-APAPARTCKRTINPSADD
        ++ S  H    +G+Q+RGVRRRPWGK+AAEIRDP + GAR+WLGTY T +DAA AYDRAAFQ+RG+KAKLNFPH+I +    P   R  +R+  PS  D
Subjt:  SEGSERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASD-APAPARTCKRTINPSADD

AT4G17500.1 ethylene responsive element binding factor 11.3e-2155.43Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASDAPAPAR-TCKRTINPSADDDPPP
        +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGT+ TA+DAA AYDRAAF+MRG++A LNFP  + + + P P R   KR+   S++++  P
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASDAPAPAR-TCKRTINPSADDDPPP

AT5G13330.1 related to AP2 6l3.5e-2243.41Show/hide
Query:  LEDELGNSEGSERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASDAPAPARTCKRTIN
        ++ EL  S+  +  + + R   +RGVR+RPWGK+AAEIRDP +K AR+WLGT+ TA++AA AYDRAA + +G KAKLNFP  +             R ++
Subjt:  LEDELGNSEGSERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAASDAPAPARTCKRTIN

Query:  PSADDDPPPPPPPPLFNIVKRPRTTTDDL
         S  + PPP P PP       P T   D+
Subjt:  PSADDDPPPPPPPPLFNIVKRPRTTTDDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGCAAGGGCAGCAGCAGGTTAGAAGAGTCGGATTTGTTTGTGTTGGAGAGGATTCGGCGGCATCTTCTAGAAGACGAATTGGGTAATTCGGAGGGAAGTGAAAG
GCATAAACATGAGGTTCGGGGGCTGCAGTTCAGAGGAGTGAGGAGGAGGCCATGGGGTAAGTACGCAGCAGAGATTAGAGATCCCAACAGAAAAGGGGCTCGAATATGGC
TTGGGACTTACCACACCGCCCAAGACGCTGCTTTCGCTTACGATCGAGCCGCTTTCCAGATGCGAGGGGCCAAAGCCAAGCTCAACTTCCCACACATGATTGCAGCTTCC
GACGCACCTGCTCCTGCTCGCACCTGCAAGCGTACCATTAATCCATCTGCTGACGACGATCCCCCTCCGCCTCCGCCTCCGCCCCTATTCAACATCGTCAAGCGCCCAAG
AACAACCACCGATGACCTTGACCACCACCTTCTCCAAACTTGTGTTCCATTATTCCCACTCCCCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGCAAGGGCAGCAGCAGGTTAGAAGAGTCGGATTTGTTTGTGTTGGAGAGGATTCGGCGGCATCTTCTAGAAGACGAATTGGGTAATTCGGAGGGAAGTGAAAG
GCATAAACATGAGGTTCGGGGGCTGCAGTTCAGAGGAGTGAGGAGGAGGCCATGGGGTAAGTACGCAGCAGAGATTAGAGATCCCAACAGAAAAGGGGCTCGAATATGGC
TTGGGACTTACCACACCGCCCAAGACGCTGCTTTCGCTTACGATCGAGCCGCTTTCCAGATGCGAGGGGCCAAAGCCAAGCTCAACTTCCCACACATGATTGCAGCTTCC
GACGCACCTGCTCCTGCTCGCACCTGCAAGCGTACCATTAATCCATCTGCTGACGACGATCCCCCTCCGCCTCCGCCTCCGCCCCTATTCAACATCGTCAAGCGCCCAAG
AACAACCACCGATGACCTTGACCACCACCTTCTCCAAACTTGTGTTCCATTATTCCCACTCCCCAAATAA
Protein sequenceShow/hide protein sequence
MGSKGSSRLEESDLFVLERIRRHLLEDELGNSEGSERHKHEVRGLQFRGVRRRPWGKYAAEIRDPNRKGARIWLGTYHTAQDAAFAYDRAAFQMRGAKAKLNFPHMIAAS
DAPAPARTCKRTINPSADDDPPPPPPPPLFNIVKRPRTTTDDLDHHLLQTCVPLFPLPK