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Lag0020588 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020588
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr7:642009..642546
RNA-Seq ExpressionLag0020588
SyntenyLag0020588
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597027.1 hypothetical protein SDJN03_10207, partial [Cucurbita argyrosperma subsp. sororia]6.7e-3877.06Show/hide
Query:  PVCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQKGSGDQDKRERNSGGVPSPRPAPRR
        PVCCLCGDVGFPANLFRC  CS+RFQHSYCSNYYGE+AEAIE CDWCR ERR   G RGSA +      +G  SQK SG QDKRERNSGG+PSPR APRR
Subjt:  PVCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQKGSGDQDKRERNSGGVPSPRPAPRR

Query:  YKLLKDVMC
        YKLLKDVMC
Subjt:  YKLLKDVMC

KAG7028505.1 hypothetical protein SDJN02_09686, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3777.06Show/hide
Query:  PVCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQKGSGDQDKRERNSGGVPSPRPAPRR
        PVCCLCGDVGFPANLFRC  CS+RFQHSYCSNYYGE AEAIE CDWCR ERR   G RGSA +      +G  SQK SG QDKRERNSGG+PSPR APRR
Subjt:  PVCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQKGSGDQDKRERNSGGVPSPRPAPRR

Query:  YKLLKDVMC
        YKLLKDVMC
Subjt:  YKLLKDVMC

XP_022974249.1 uncharacterized protein LOC111472884 isoform X1 [Cucurbita maxima]2.7e-3970.97Show/hide
Query:  SDHHHH---------PVCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQKGSGDQDKRE
        + HH H         PVCCLCGDVGFPANLFRC  CS+RFQHSYCSNYYGESAEAIEVCDWCR ERR   G RGSA +       G  SQK S  QDKRE
Subjt:  SDHHHH---------PVCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQKGSGDQDKRE

Query:  RNSGGVPSPRPAPRRYKLLKDVMC
        RNSGG+PSPR APRRYKLLKDVMC
Subjt:  RNSGGVPSPRPAPRRYKLLKDVMC

XP_022974251.1 uncharacterized protein LOC111472884 isoform X2 [Cucurbita maxima]6.1e-3971.77Show/hide
Query:  SDHHHH---------PVCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQKGSGDQDKRE
        + HH H         PVCCLCGDVGFPANLFRC  CS+RFQHSYCSNYYGESAEAIEVCDWCR ERR   G RGSA +       G  SQK SG QDKRE
Subjt:  SDHHHH---------PVCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQKGSGDQDKRE

Query:  RNSGGVPSPRPAPRRYKLLKDVMC
        RNSGG+PSPR APRRYKLLKDVMC
Subjt:  RNSGGVPSPRPAPRRYKLLKDVMC

XP_023540879.1 uncharacterized protein LOC111801126 [Cucurbita pepo subsp. pepo]3.0e-3875.65Show/hide
Query:  SDHHHHPVCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQKGSGDQDKRERNSGGVPSP
        S H   PVCCLCGDVGFPANLFRC  CS+RFQHSYCSNYYGE AEAIEVCDWCR ERR   G RGSA +      +G  SQK SG QDKRERNSGG+PSP
Subjt:  SDHHHHPVCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQKGSGDQDKRERNSGGVPSP

Query:  RPAPRRYKLLKDVMC
        R APRRYKLLKDVMC
Subjt:  RPAPRRYKLLKDVMC

TrEMBL top hitse value%identityAlignment
A0A1Q3D081 Uncharacterized protein1.1e-3058.82Show/hide
Query:  VCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQ-KGSGDQ----------DKRERNSGG
        VCC+CGDVGFP  LFRC  C NRFQHSYCSNYY E AE IE+CDWC+SE R++  H  S++KS V +  GAT++ + SGD+          D++ +N  G
Subjt:  VCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQ-KGSGDQ----------DKRERNSGG

Query:  VPSPRPAPRRYKLLKDVMC
        VPSPRP  RRYKLLKDVMC
Subjt:  VPSPRPAPRRYKLLKDVMC

A0A5B6YSM7 Uncharacterized protein (Fragment)2.8e-2957.98Show/hide
Query:  VCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQK--GSGDQDKRE---------RNSGG
        VCC+CGDVGFP  LFRC+ C NRFQHSYCSNYY ES+E IE+CDWC+SE RS   H  S++KS   H  G TS+     GD+ K+          +N  G
Subjt:  VCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQK--GSGDQDKRE---------RNSGG

Query:  VPSPRPAPRRYKLLKDVMC
         PSPRP  RRYKLLKDVMC
Subjt:  VPSPRPAPRRYKLLKDVMC

A0A6J1IAU2 uncharacterized protein LOC111472884 isoform X22.9e-3971.77Show/hide
Query:  SDHHHH---------PVCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQKGSGDQDKRE
        + HH H         PVCCLCGDVGFPANLFRC  CS+RFQHSYCSNYYGESAEAIEVCDWCR ERR   G RGSA +       G  SQK SG QDKRE
Subjt:  SDHHHH---------PVCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQKGSGDQDKRE

Query:  RNSGGVPSPRPAPRRYKLLKDVMC
        RNSGG+PSPR APRRYKLLKDVMC
Subjt:  RNSGGVPSPRPAPRRYKLLKDVMC

A0A6J1IH20 uncharacterized protein LOC111472884 isoform X11.3e-3970.97Show/hide
Query:  SDHHHH---------PVCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQKGSGDQDKRE
        + HH H         PVCCLCGDVGFPANLFRC  CS+RFQHSYCSNYYGESAEAIEVCDWCR ERR   G RGSA +       G  SQK S  QDKRE
Subjt:  SDHHHH---------PVCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQKGSGDQDKRE

Query:  RNSGGVPSPRPAPRRYKLLKDVMC
        RNSGG+PSPR APRRYKLLKDVMC
Subjt:  RNSGGVPSPRPAPRRYKLLKDVMC

A0A7J7I2F5 Uncharacterized protein4.7e-2957.85Show/hide
Query:  VCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQ-KGSGDQ----DKRE--------RNS
        VCC+CGDVGFP  LFRC  C NRFQHSYCSNYY ES+E IE+CDWC+SE RS+  H  S++KS  ++   AT + + SGD+    D RE        +N 
Subjt:  VCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQ-KGSGDQ----DKRE--------RNS

Query:  GGVPSPRPAPRRYKLLKDVMC
         G PSPRP+ RRYKLLKDVMC
Subjt:  GGVPSPRPAPRRYKLLKDVMC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02070.1 unknown protein6.9e-2547.66Show/hide
Query:  VCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRS------NGGHRGSARKSVVNHMNGAT--SQKGSGDQDKRERN------
        VCC+CGDVGF   LF C +C  RFQHSYCSNYYG+ AE  E+CDWCRS+ R       +GG       S V + N  +  S+   G + K   N      
Subjt:  VCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRS------NGGHRGSARKSVVNHMNGAT--SQKGSGDQDKRERN------

Query:  ------SGGVPSPRPAPRRYKLLKDVMC
               GGV SP+ A RRYKLLKDVMC
Subjt:  ------SGGVPSPRPAPRRYKLLKDVMC

AT3G60520.1 unknown protein1.4e-2547.54Show/hide
Query:  VCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHR-----GSARKSVVNHMNGATSQ---------KGSGDQDKRERN
        VCC+CGDVGF   LF C+ C NRFQHSYCS+YY E A+ I++CDWC+ E +S  G +     GS+++S  +  +    Q           S      ++ 
Subjt:  VCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHR-----GSARKSVVNHMNGATSQ---------KGSGDQDKRERN

Query:  SGGVPSPRPAPRRYKLLKDVMC
          GVPSPRPA RRYKLLKDVMC
Subjt:  SGGVPSPRPAPRRYKLLKDVMC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTACTCCGACCACCACCACCACCCCGTCTGCTGCCTCTGCGGCGACGTCGGTTTTCCCGCCAACCTCTTCCGCTGCGCCAACTGCTCCAACCGCTTCCAACACTC
TTATTGCAGCAACTATTACGGGGAATCGGCAGAGGCAATTGAAGTGTGTGATTGGTGCAGGAGTGAACGGAGAAGTAATGGCGGCCACCGTGGCTCTGCAAGGAAGTCTG
TTGTCAACCATATGAATGGCGCCACGTCCCAAAAGGGCTCCGGCGATCAAGACAAAAGAGAGAGAAACTCCGGCGGAGTGCCGTCGCCTCGGCCTGCTCCACGCCGGTAC
AAGCTTCTCAAGGATGTTATGTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTACTCCGACCACCACCACCACCCCGTCTGCTGCCTCTGCGGCGACGTCGGTTTTCCCGCCAACCTCTTCCGCTGCGCCAACTGCTCCAACCGCTTCCAACACTC
TTATTGCAGCAACTATTACGGGGAATCGGCAGAGGCAATTGAAGTGTGTGATTGGTGCAGGAGTGAACGGAGAAGTAATGGCGGCCACCGTGGCTCTGCAAGGAAGTCTG
TTGTCAACCATATGAATGGCGCCACGTCCCAAAAGGGCTCCGGCGATCAAGACAAAAGAGAGAGAAACTCCGGCGGAGTGCCGTCGCCTCGGCCTGCTCCACGCCGGTAC
AAGCTTCTCAAGGATGTTATGTGTTAA
Protein sequenceShow/hide protein sequence
MDYSDHHHHPVCCLCGDVGFPANLFRCANCSNRFQHSYCSNYYGESAEAIEVCDWCRSERRSNGGHRGSARKSVVNHMNGATSQKGSGDQDKRERNSGGVPSPRPAPRRY
KLLKDVMC