CuGenDBv2

Gene ID	Lag0020624
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	DNA-directed RNA polymerase II subunit 1-like
Genome location	chr7:889137..890423
RNA-Seq Expression	Lag0020624
Synteny	Lag0020624
Gene Ontology terms	GO:0044237 - cellular metabolic process (biological process) GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6597058.1 hypothetical protein SDJN03_10238, partial [Cucurbita argyrosperma subsp. sororia]

3.2e-108

73.79

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Query:  MANLPRFGRTWQRFSSLPRPGTASRPEVQP--TTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVA-TTSPRKPLSPTPTYNRY
        MANLPRFGRTW RFSSLPRPGTA R +V P   T+EPEV+PSA  T NV QTSPI+E+SP++ SPVRK PSPP+SPKYR  A +TSPRKPLSP PTYNRY
Subjt:  MANLPRFGRTWQRFSSLPRPGTASRPEVQP--TTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVA-TTSPRKPLSPTPTYNRY

Query:  DGERRTSATTSPKTFKPTYTSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQK-TAEKAVKSDHRATEYSAGKPHQKH
        DGERR+SA  SPKTFK TYTSPPRSP K KYST+T  APLSPL LP  E RHE E MVR RSPPEV++K++ YQK T+EK  K+DHRA+EYS+GKP QK 
Subjt:  DGERRTSATTSPKTFKPTYTSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQK-TAEKAVKSDHRATEYSAGKPHQKH

Query:  HQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPTHG
          QQ  QSDVINIKGENVGAVMHITQSSD TE  K+KP V +S+E ++ +NK SSSNMPGKSFMNSNFQGVNNSILYNSSL+HRDPGLHLA++K KPTH 
Subjt:  HQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPTHG

Query:  DSLHDSSRH
        DS+HD SRH
Subjt:  DSLHDSSRH

XP_022945677.1 DNA-directed RNA polymerase II subunit 1-like [Cucurbita moschata]

9.3e-108

73.46

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Query:  MANLPRFGRTWQRFSSLPRPGTASRPEVQP--TTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVA-TTSPRKPLSPTPTYNRY
        MANLPRFGRTW RFSSLPRPGTA R +V P   T+EPEV+PSA  T NV QTSPI+E+SP++ SPVRK PSPP+SPKYR  A +TSPRKPLSP PTYNRY
Subjt:  MANLPRFGRTWQRFSSLPRPGTASRPEVQP--TTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVA-TTSPRKPLSPTPTYNRY

Query:  DGERRTSATTSPKTFKPTYTSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQK-TAEKAVKSDHRATEYSAGKPHQKH
        DGERR+SA  SPKTFK TYTSPPRSP K KYST+T  APLSPL LP  E RHE E +VR RSPPEV++K++ YQK T+EK  K+DHRA+EYS+GKP QK 
Subjt:  DGERRTSATTSPKTFKPTYTSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQK-TAEKAVKSDHRATEYSAGKPHQKH

Query:  HQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPTHG
          QQ  QSDVINIKGENVGAVMHITQSSD TE  K+KP V +S+E ++ +NK SSSNMPGKSFMNSNFQGVNNSILYNSSL+HRDPGLHLA++K KPTH 
Subjt:  HQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPTHG

Query:  DSLHDSSRH
        DS+HD SRH
Subjt:  DSLHDSSRH

XP_022974814.1 DNA-directed RNA polymerase II subunit 1-like isoform X2 [Cucurbita maxima]

7.9e-107

73.46

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Query:  MANLPRFGRTWQRFSSLPRPGTASRPEVQP--TTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVA-TTSPRKPLSPTPTYNRY
        MANLPRFGRTW RFSSLPRP TA R +V P   T+EPEVF SA  T NV QTSPI+E+SP++ SPVRK PSPP+SPKYR  A +TSPRKPLSP PTYNRY
Subjt:  MANLPRFGRTWQRFSSLPRPGTASRPEVQP--TTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVA-TTSPRKPLSPTPTYNRY

Query:  DGERRTSATTSPKTFKPTYTSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQK-TAEKAVKSDHRATEYSAGKPHQKH
        DGERR+SA  SPKTFK TYTSPPRSP K KYST+T  APLSPL LP  E RHE E MVR RSPPEV++K++ YQK T+EK  K+DHRA+EYS+GKP QK 
Subjt:  DGERRTSATTSPKTFKPTYTSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQK-TAEKAVKSDHRATEYSAGKPHQKH

Query:  HQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPTHG
          QQ  QSDVINIKGENVGAVMHITQSSD TE  K+KP V +S+E ++ +NK SSSNMPGKSFMNSNFQGVNNSILYNSSL+HRDPGLHLA++K KPTH 
Subjt:  HQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPTHG

Query:  DSLHDSSRH
        DS+HD SRH
Subjt:  DSLHDSSRH

XP_023538835.1 proline-rich extensin-like protein EPR1 [Cucurbita pepo subsp. pepo]

9.3e-108

73.46

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Query:  MANLPRFGRTWQRFSSLPRPGTASRPEVQP--TTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVA-TTSPRKPLSPTPTYNRY
        MANLPRFGRTW RFSSLPRPGTA R +V P    +EPEV+P    T NV QTSPI+E+SP++PSPVRK PSPP+SPKYR  A +TSPRKPLSP PTYNRY
Subjt:  MANLPRFGRTWQRFSSLPRPGTASRPEVQP--TTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVA-TTSPRKPLSPTPTYNRY

Query:  DGERRTSATTSPKTFKPTYTSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQK-TAEKAVKSDHRATEYSAGKPHQKH
        DGERRTSA  SPKTFK TYTSPPRSP K KYST+T  APLSPL LP  E RHE E MVR RSPPEV++K++ YQK T+EK  K+DHRA+EYS+GKP QK 
Subjt:  DGERRTSATTSPKTFKPTYTSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQK-TAEKAVKSDHRATEYSAGKPHQKH

Query:  HQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPTHG
          QQ  QSDVINIKGENVGAVMHITQSSD TE  K+KP V +S+E ++ +NK SSSNMPGKSFMNSNFQGVNNSILYNSSL+HRDPGLHLA++K KPTH 
Subjt:  HQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPTHG

Query:  DSLHDSSRH
        DS+HD SRH
Subjt:  DSLHDSSRH

XP_038904572.1 pollen-specific leucine-rich repeat extensin-like protein 1 [Benincasa hispida]

6.7e-106

73.72

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Query:  MANLPRFGRTWQRFSSLPRPGTASRPEVQPTTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVATT-SPRKPLSPTPTYNRYDG
        M+NLPRFGRTW RFSSLPRP +A RPE+QP TT  E  P   TT NV QTSPI+E+SP++PSPV K PSPPSSPKY GVATT SPRKPLSPTP YNRYDG
Subjt:  MANLPRFGRTWQRFSSLPRPGTASRPEVQPTTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVATT-SPRKPLSPTPTYNRYDG

Query:  ERRTSATTSPKTFKPTYTSPPRSPPKQKYST---TTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVE-RKTIYQKTAEKAVKSDHRATEYSAGKPHQKH
        ERRTSATTSPK FKPT  SPP SPPK K+ST     TAAPLSPL LPRSEVR E EH VR RSPPEVE +K +YQ T EK  K++HR  EY +GKP+QKH
Subjt:  ERRTSATTSPKTFKPTYTSPPRSPPKQKYST---TTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVE-RKTIYQKTAEKAVKSDHRATEYSAGKPHQKH

Query:  ---HQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKP
            QQQQLQSDVINIKGENVGAVMHITQSSDG+EI K+KP    + E +EK NK S+ N P K FMNSNFQGVNNSILYNSSL+HRDPGLHLAYSK KP
Subjt:  ---HQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKP

Query:  THGDSLHDSSRH
         HGDSLHD SRH
Subjt:  THGDSLHDSSRH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5T3 Uncharacterized protein

1.6e-105

71.7

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Query:  MANLPRFGRTWQRFSSLPRPGTASRPEVQPTT--TEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVATTSPRKPLSPTPTYNRYD
        M+NLPRFGR W RFSSLPRPGTA+RPE QP T  TEPEVFPSA  TTN FQTSPI++++P++ SPV+K  SPPSSPKY G  T SPRKPLSP P +NRY+
Subjt:  MANLPRFGRTWQRFSSLPRPGTASRPEVQPTT--TEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVATTSPRKPLSPTPTYNRYD

Query:  GERRTSATTSPKTFKPTYTSPPRSPPKQKYSTTTTA-APLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQ-KTAEKAVKSDH--RATEYSAGKPHQ
        GERRTSATTSPKTFKPT+ SPP SP K ++ST  TA APLSPL LPRS+VR E EH +R RSPPE+E+K I YQ  T EK  K+DH  +  EY A KP Q
Subjt:  GERRTSATTSPKTFKPTYTSPPRSPPKQKYSTTTTA-APLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQ-KTAEKAVKSDH--RATEYSAGKPHQ

Query:  KHHQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPT
        K  Q QQLQSDVINIKGENVGAVMHITQSSDG+E+ K+KP VG S E +EKTNK S+SN PGKSFMNSNFQGVNNSILYNSSL+HRDPGLHLA+   K  
Subjt:  KHHQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPT

Query:  HGDSLHDSSRH
        HGDS+HD SRH
Subjt:  HGDSLHDSSRH

A0A5A7TZ60 Microtubule-associated protein RP/EB family member 1-like

1.6e-105

71.47

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Query:  MANLPRFGRTWQRFSSLPRPGTASRPEVQP---TTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRG-VATTSPRKPLSPTPTYNR
        M+NLPRFGRTW RFSSLPRP TA+R E QP     TEPEVFPSA  TTN  QTSP+++++P++ SPV+K PSPPSSPKY G   T SPRKPLSP  TYNR
Subjt:  MANLPRFGRTWQRFSSLPRPGTASRPEVQP---TTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRG-VATTSPRKPLSPTPTYNR

Query:  YDGERRTSATTSPKTFKPTYTSPPRSPPKQKYST-TTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQ-KTAEKAVKSDHRAT-EYSAGKPH
        +DGERRTSATTSPKTFKPTY SPP SPPK K+ST  T  APLSPL LPRSEVR E E  +R RSPPE+E+K I YQ  T EK  K+D+R T +Y   KP 
Subjt:  YDGERRTSATTSPKTFKPTYTSPPRSPPKQKYST-TTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQ-KTAEKAVKSDHRAT-EYSAGKPH

Query:  QKHHQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKP
        QK H  QQLQSDVINIKG+NVGAVMHITQSSDG+EI K+KP VG S E +EKTNK S+SN PGKSFMNSNFQGVNNSILYNSSL+HRDPGLHLAYS   P
Subjt:  QKHHQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKP

Query:  THGDSLHDSSRH
         HGDS+H+ SRH
Subjt:  THGDSLHDSSRH

A0A6J1G1L2 DNA-directed RNA polymerase II subunit 1-like

4.5e-108

73.46

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Query:  MANLPRFGRTWQRFSSLPRPGTASRPEVQP--TTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVA-TTSPRKPLSPTPTYNRY
        MANLPRFGRTW RFSSLPRPGTA R +V P   T+EPEV+PSA  T NV QTSPI+E+SP++ SPVRK PSPP+SPKYR  A +TSPRKPLSP PTYNRY
Subjt:  MANLPRFGRTWQRFSSLPRPGTASRPEVQP--TTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVA-TTSPRKPLSPTPTYNRY

Query:  DGERRTSATTSPKTFKPTYTSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQK-TAEKAVKSDHRATEYSAGKPHQKH
        DGERR+SA  SPKTFK TYTSPPRSP K KYST+T  APLSPL LP  E RHE E +VR RSPPEV++K++ YQK T+EK  K+DHRA+EYS+GKP QK 
Subjt:  DGERRTSATTSPKTFKPTYTSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQK-TAEKAVKSDHRATEYSAGKPHQKH

Query:  HQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPTHG
          QQ  QSDVINIKGENVGAVMHITQSSD TE  K+KP V +S+E ++ +NK SSSNMPGKSFMNSNFQGVNNSILYNSSL+HRDPGLHLA++K KPTH 
Subjt:  HQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPTHG

Query:  DSLHDSSRH
        DS+HD SRH
Subjt:  DSLHDSSRH

A0A6J1IEX0 DNA-directed RNA polymerase II subunit 1-like isoform X2

3.8e-107

73.46

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Query:  MANLPRFGRTWQRFSSLPRPGTASRPEVQP--TTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVA-TTSPRKPLSPTPTYNRY
        MANLPRFGRTW RFSSLPRP TA R +V P   T+EPEVF SA  T NV QTSPI+E+SP++ SPVRK PSPP+SPKYR  A +TSPRKPLSP PTYNRY
Subjt:  MANLPRFGRTWQRFSSLPRPGTASRPEVQP--TTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVA-TTSPRKPLSPTPTYNRY

Query:  DGERRTSATTSPKTFKPTYTSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQK-TAEKAVKSDHRATEYSAGKPHQKH
        DGERR+SA  SPKTFK TYTSPPRSP K KYST+T  APLSPL LP  E RHE E MVR RSPPEV++K++ YQK T+EK  K+DHRA+EYS+GKP QK 
Subjt:  DGERRTSATTSPKTFKPTYTSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQK-TAEKAVKSDHRATEYSAGKPHQKH

Query:  HQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPTHG
          QQ  QSDVINIKGENVGAVMHITQSSD TE  K+KP V +S+E ++ +NK SSSNMPGKSFMNSNFQGVNNSILYNSSL+HRDPGLHLA++K KPTH 
Subjt:  HQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPTHG

Query:  DSLHDSSRH
        DS+HD SRH
Subjt:  DSLHDSSRH

A0A6J1IHF4 DNA-directed RNA polymerase II subunit 1-like isoform X1

4.2e-106

73.14

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Query:  MANLPRFGRTWQRFSSLPRPGTASRPEVQP--TTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVA-TTSPRKPLSPTPTYNRY
        MANLPRFGRTW RFSSLPRP TA R +V P   T+EPEVF SA  T NV QTSPI+E+SP++ SPVRK  SPP+SPKYR  A +TSPRKPLSP PTYNRY
Subjt:  MANLPRFGRTWQRFSSLPRPGTASRPEVQP--TTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVA-TTSPRKPLSPTPTYNRY

Query:  DGERRTSATTSPKTFKPTYTSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQK-TAEKAVKSDHRATEYSAGKPHQKH
        DGERR+SA  SPKTFK TYTSPPRSP K KYST+T  APLSPL LP  E RHE E MVR RSPPEV++K++ YQK T+EK  K+DHRA+EYS+GKP QK 
Subjt:  DGERRTSATTSPKTFKPTYTSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTI-YQK-TAEKAVKSDHRATEYSAGKPHQKH

Query:  HQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPTHG
          QQ  QSDVINIKGENVGAVMHITQSSD TE  K+KP V +S+E ++ +NK SSSNMPGKSFMNSNFQGVNNSILYNSSL+HRDPGLHLA++K KPTH 
Subjt:  HQQQQLQSDVINIKGENVGAVMHITQSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPTHG

Query:  DSLHDSSRH
        DS+HD SRH
Subjt:  DSLHDSSRH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G75260.1 oxidoreductases, acting on NADH or NADPH

6.0e-04

31.25

Show/hide

Query:  VINIKGENVGAVMHITQSSD--GTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGK-----------SFMNSNFQGVNNSILYNSSLTHRDPGLHLAY
        V  + GEN GA M I    D    E+  R+   G+ +  DE +N +++     K           +++N N QG+NNSI+  SS++  DPG+H+++
Subjt:  VINIKGENVGAVMHITQSSD--GTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGK-----------SFMNSNFQGVNNSILYNSSLTHRDPGLHLAY

AT2G46630.1 unknown protein

1.7e-11

27.96

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Query:  RPGTASRPEVQPTTTEPEVFPSAS-TTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVATTSPRKPLS-PTPTYNRYDGERRTSATTSPKTFKPTY
        +P T  R +  PT+   E  P  S  + ++   +P +  +P  P P     SPPS  + +      PRKP S P+P ++      R++ + S KT  P+ 
Subjt:  RPGTASRPEVQPTTTEPEVFPSAS-TTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVATTSPRKPLS-PTPTYNRYDGERRTSATTSPKTFKPTY

Query:  TSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELE----HMVRSRSPPEVERKTIYQKTAEKAVKSDHRATE---YSAGKPHQ-----KHHQQQQ----
        +   R  P  +         LSP +LP S +  E E    +++ +    +      + +        +H   +   Y+  + HQ     K H+Q      
Subjt:  TSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELE----HMVRSRSPPEVERKTIYQKTAEKAVKSDHRATE---YSAGKPHQ-----KHHQQQQ----

Query:  ---LQSDVINIKGENVGAVMHITQSSDGTE---------------------IQKRKPGVGHSNEGDEKTNKS----SSSNMPGKSFMNSNFQGVNNSILY
           + + VI I GEN GAVM I +S  G +                     +Q          EG +KT K+     +SN+P K+FMNSN Q +NNSI+Y
Subjt:  ---LQSDVINIKGENVGAVMHITQSSDGTE---------------------IQKRKPGVGHSNEGDEKTNKS----SSSNMPGKSFMNSNFQGVNNSILY

Query:  NSSLTHRDPGLHLAYSKNKPTHGDSLHDS
        NS+ +H DPG+HL  S+ KP   +  H S
Subjt:  NSSLTHRDPGLHLAYSKNKPTHGDSLHDS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAAATCTTCCTCGTTTTGGTCGTACATGGCAACGTTTCTCTTCTCTCCCCCGCCCTGGCACTGCCTCACGACCTGAAGTTCAACCGACGACGACAGAACCAGAAGT
TTTTCCCTCTGCTTCCACGACCACCAATGTTTTTCAAACTTCCCCGATTAGAGAAAAATCTCCTCAGGTCCCATCTCCGGTGAGGAAATTACCGTCGCCACCTTCTTCTC
CAAAATATAGGGGTGTCGCCACCACTTCGCCTCGCAAGCCACTATCTCCAACTCCAACGTACAACCGTTACGACGGTGAACGGCGGACCAGTGCCACGACATCTCCCAAA
ACCTTCAAGCCCACTTACACCTCTCCACCACGATCACCACCCAAGCAAAAATACTCCACCACCACCACTGCCGCACCACTCTCTCCTCTGACTCTACCACGCTCAGAGGT
GAGACATGAACTTGAGCACATGGTTCGATCGAGGAGCCCACCAGAGGTGGAACGCAAGACAATCTACCAGAAGACGGCGGAGAAGGCGGTGAAATCCGACCACCGAGCGA
CGGAGTACAGCGCCGGGAAACCCCACCAAAAGCATCATCAGCAGCAGCAGCTGCAGAGTGATGTTATAAACATCAAAGGAGAGAATGTAGGAGCCGTGATGCACATAACT
CAATCCTCGGATGGGACAGAAATTCAGAAGAGAAAGCCAGGCGTTGGTCACAGCAACGAAGGCGATGAGAAAACAAACAAATCATCGAGCTCCAACATGCCAGGAAAATC
GTTCATGAACAGCAATTTTCAAGGTGTCAACAATTCCATTCTGTACAATTCCTCGTTAACCCACCGTGATCCTGGCCTGCACCTTGCTTACTCCAAGAACAAGCCCACCC
ATGGCGATTCTCTTCATGATTCTTCCAGGCACTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MANLPRFGRTWQRFSSLPRPGTASRPEVQPTTTEPEVFPSASTTTNVFQTSPIREKSPQVPSPVRKLPSPPSSPKYRGVATTSPRKPLSPTPTYNRYDGERRTSATTSPK
TFKPTYTSPPRSPPKQKYSTTTTAAPLSPLTLPRSEVRHELEHMVRSRSPPEVERKTIYQKTAEKAVKSDHRATEYSAGKPHQKHHQQQQLQSDVINIKGENVGAVMHIT
QSSDGTEIQKRKPGVGHSNEGDEKTNKSSSSNMPGKSFMNSNFQGVNNSILYNSSLTHRDPGLHLAYSKNKPTHGDSLHDSSRH

Lag0020624 (gene) of Sponge gourd (AG-4) v1 genome