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Lag0020685 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020685
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr7:1346710..1347168
RNA-Seq ExpressionLag0020685
SyntenyLag0020685
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582657.1 hypothetical protein SDJN03_22659, partial [Cucurbita argyrosperma subsp. sororia]1.3e-0444.66Show/hide
Query:  HVIVLFTVDD-----ATLSSSFFVHLPSSSDSMTD-HSNIMAPLLIVIVDRPKTDSSSNSCCR--GK--WQSRREIRTSQSETASANLFRQTMPIPPPLI
        HVIVL T+DD     ++ SSS       SSDSMTD HS+I+A + IVIVD PKT+ S  S CR  GK   +S    RT  + +           IP P+I
Subjt:  HVIVLFTVDD-----ATLSSSFFVHLPSSSDSMTD-HSNIMAPLLIVIVDRPKTDSSSNSCCR--GK--WQSRREIRTSQSETASANLFRQTMPIPPPLI

Query:  NSP
        NSP
Subjt:  NSP
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTCTGTTATAAAGATGGAAGGCAAGCCAGTAAACCCACGCCACGTGATTGTACTTTTCACAGTTGACGACGCTACGCTTTCTTCTTCTTTCTTCGTTCATCTTCC
TTCTTCGTCAGATTCCATGACTGATCACAGCAACATCATGGCGCCGCTGCTCATCGTCATTGTCGATCGACCAAAAACAGATTCATCCAGCAACAGCTGCTGCCGAGGGA
AATGGCAAAGTCGGCGCGAAATCCGGACATCGCAATCGGAGACAGCTAGCGCTAACCTGTTTCGTCAGACAATGCCGATCCCACCACCTCTTATTAATTCGCCCAATCGA
CCATCAGAGAAGTCAGATCGGCACGAATTTGCTGATCTGAATCGGCGTCGCCATCAAATCAATCAATCACGCCCATTTCTCTGGCTTTCTATTCGGCGCGCGATTGGATC
TTTCCTACTGATATCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCTCTGTTATAAAGATGGAAGGCAAGCCAGTAAACCCACGCCACGTGATTGTACTTTTCACAGTTGACGACGCTACGCTTTCTTCTTCTTTCTTCGTTCATCTTCC
TTCTTCGTCAGATTCCATGACTGATCACAGCAACATCATGGCGCCGCTGCTCATCGTCATTGTCGATCGACCAAAAACAGATTCATCCAGCAACAGCTGCTGCCGAGGGA
AATGGCAAAGTCGGCGCGAAATCCGGACATCGCAATCGGAGACAGCTAGCGCTAACCTGTTTCGTCAGACAATGCCGATCCCACCACCTCTTATTAATTCGCCCAATCGA
CCATCAGAGAAGTCAGATCGGCACGAATTTGCTGATCTGAATCGGCGTCGCCATCAAATCAATCAATCACGCCCATTTCTCTGGCTTTCTATTCGGCGCGCGATTGGATC
TTTCCTACTGATATCCTAG
Protein sequenceShow/hide protein sequence
MCSVIKMEGKPVNPRHVIVLFTVDDATLSSSFFVHLPSSSDSMTDHSNIMAPLLIVIVDRPKTDSSSNSCCRGKWQSRREIRTSQSETASANLFRQTMPIPPPLINSPNR
PSEKSDRHEFADLNRRRHQINQSRPFLWLSIRRAIGSFLLIS