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Lag0020762 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020762
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMediator of RNA polymerase II transcription subunit 2-like
Genome locationchr7:1922479..1927308
RNA-Seq ExpressionLag0020762
SyntenyLag0020762
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048973.1 mediator of RNA polymerase II transcription subunit 2-like [Cucumis melo var. makuwa]5.5e-0995.12Show/hide
Query:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKA+QAM+LDK
Subjt:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
KCW78058.1 hypothetical protein EUGRSUZ_D02281, partial [Eucalyptus grandis]4.7e-0892.68Show/hide
Query:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        VDGSGKKKKG GGFQVGK+KVKTKLTA AKAKAAQAMELDK
Subjt:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
KGN56523.1 hypothetical protein Csa_010072 [Cucumis sativus]5.5e-0983.67Show/hide
Query:  QEVTGSNPVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        Q    S  VDGSGKKKKGGGGFQVGKKKVKTKLTA AKAKA+QAMELDK
Subjt:  QEVTGSNPVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
XP_022147302.1 uncharacterized protein LOC111016287 [Momordica charantia]9.4e-0995.12Show/hide
Query:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        VDGSGK+KKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELD+
Subjt:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
XP_022941890.1 uncharacterized protein LOC111447114 [Cucurbita moschata]5.5e-0997.56Show/hide
Query:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        VDGSGKKKKGG GFQVGKKKVKTKLTAAAKAKAAQAMELDK
Subjt:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
TrEMBL top hitse value%identityAlignment
A0A0A0L493 Uncharacterized protein2.7e-0983.67Show/hide
Query:  QEVTGSNPVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        Q    S  VDGSGKKKKGGGGFQVGKKKVKTKLTA AKAKA+QAMELDK
Subjt:  QEVTGSNPVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A5A7TZC8 Mediator of RNA polymerase II transcription subunit 2-like2.7e-0995.12Show/hide
Query:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKA+QAM+LDK
Subjt:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A6J1D208 uncharacterized protein LOC1110162874.6e-0995.12Show/hide
Query:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        VDGSGK+KKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELD+
Subjt:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A6J1FV29 uncharacterized protein LOC1114471142.7e-0997.56Show/hide
Query:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        VDGSGKKKKGG GFQVGKKKVKTKLTAAAKAKAAQAMELDK
Subjt:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A6J1IED7 uncharacterized protein LOC1114732882.7e-0997.56Show/hide
Query:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        VDGSGKKKKGG GFQVGKKKVKTKLTAAAKAKAAQAMELDK
Subjt:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G45860.1 unknown protein1.3e-0885Show/hide
Query:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELD
        VDGSGKKKK  GGF VGKKK+KTKLT  AKAKAAQAMELD
Subjt:  VDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCCTGGCGCGGCGGCAGGGGGCTGACCCCCTCGGGCAGCCCCCCGTTTTGTCTTTTCCCATTCGTCTTTTTCATCCAACTAGATCCCAATGGGATTCTCAATTCCA
AGGTGCTAGGATGGGCCCTGGTAAATCGGCCCAGAAGCTAGAAGAAGCCAAGGAGAAGAAGGCCGAGGGGCCGGAGCCCAACCCGGCCCCCAGGACACGACGCTCGGCCT
CATCCCATGGGAGAGGCCGAGCATGTGGTCGGCCTCGGCCCAATGCCGAGGCCGACCAGGGCCAAAGGCCCATGAATGCTCCGGTGATGAGCAGCCGAAACCCTAAGGGG
ACTTACAAAAGGGGGACGACCAACGCAGTCAGGGATGCAAAACTTAACCCTAAATACACGTTACTTGTTCTTCGGCCAGGAACTAACTTAAGCATCGGAGAGCGCGTGGT
CTACACCACACCGGGTAAAGGCGAGATTTACTTTCAACAATGGGTCCTTAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGTCACCGGTTCGAACCCGGTTGATG
GTAGTGGAAAGAAAAAGAAGGGTGGAGGTGGATTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGACGGCAGCGGCAAAGGCAAAAGCTGCCCAAGCAATGGAGCTT
GATAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCCTGGCGCGGCGGCAGGGGGCTGACCCCCTCGGGCAGCCCCCCGTTTTGTCTTTTCCCATTCGTCTTTTTCATCCAACTAGATCCCAATGGGATTCTCAATTCCA
AGGTGCTAGGATGGGCCCTGGTAAATCGGCCCAGAAGCTAGAAGAAGCCAAGGAGAAGAAGGCCGAGGGGCCGGAGCCCAACCCGGCCCCCAGGACACGACGCTCGGCCT
CATCCCATGGGAGAGGCCGAGCATGTGGTCGGCCTCGGCCCAATGCCGAGGCCGACCAGGGCCAAAGGCCCATGAATGCTCCGGTGATGAGCAGCCGAAACCCTAAGGGG
ACTTACAAAAGGGGGACGACCAACGCAGTCAGGGATGCAAAACTTAACCCTAAATACACGTTACTTGTTCTTCGGCCAGGAACTAACTTAAGCATCGGAGAGCGCGTGGT
CTACACCACACCGGGTAAAGGCGAGATTTACTTTCAACAATGGGTCCTTAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGGTCACCGGTTCGAACCCGGTTGATG
GTAGTGGAAAGAAAAAGAAGGGTGGAGGTGGATTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGACGGCAGCGGCAAAGGCAAAAGCTGCCCAAGCAATGGAGCTT
GATAAATGA
Protein sequenceShow/hide protein sequence
MRLARRQGADPLGQPPVLSFPIRLFHPTRSQWDSQFQGARMGPGKSAQKLEEAKEKKAEGPEPNPAPRTRRSASSHGRGRACGRPRPNAEADQGQRPMNAPVMSSRNPKG
TYKRGTTNAVRDAKLNPKYTLLVLRPGTNLSIGERVVYTTPGKGEIYFQQWVLSSVVEHLTADQEVTGSNPVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMEL
DK