; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0020768 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020768
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPre-mRNA cleavage factor Im 25 kDa subunit
Genome locationchr7:1974142..1979357
RNA-Seq ExpressionLag0020768
SyntenyLag0020768
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0006378 - mRNA polyadenylation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005849 - mRNA cleavage factor complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000086 - NUDIX hydrolase domain
IPR015797 - NUDIX hydrolase-like domain superfamily
IPR016706 - Cleavage/polyadenylation specificity factor subunit 5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY41187.1 hypothetical protein CUMW_057510 [Citrus unshiu]3.2e-10179.83Show/hide
Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPK+EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLVLRYHAVYKLLRISFLF
        ANSPAL PDWQIGECVAIWWRPNFET+MYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQ+              LL + FL+
Subjt:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLVLRYHAVYKLLRISFLF

Query:  --SHSTAEIWTCYINDPTAVISVSVQHDHHMRL
          ++  AEIW  Y N  +    + VQ+D+ + L
Subjt:  --SHSTAEIWTCYINDPTAVISVSVQHDHHMRL

KAE8650255.1 hypothetical protein Csa_010494 [Cucumis sativus]1.1e-9898.32Show/hide
Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYM
        ANSP+LQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQ++
Subjt:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYM

OMO97865.1 hypothetical protein COLO4_14301 [Corchorus olitorius]1.6e-10080.17Show/hide
Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPK+EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLVLRYHAVYKLLRISFLF
        ANSPAL PDWQIGECVAIWWRPNFET+MYPYCPPHITKPKECKKLF+VHLSE+EYFAVPKNLKLLAVPLFELYDNVQ+              LLRI+   
Subjt:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLVLRYHAVYKLLRISFLF

Query:  SHSTAEIWTCYINDPTAVISVSVQHDHHMRLQ
             EIW  +IN  +A   + +QHD+ M L+
Subjt:  SHSTAEIWTCYINDPTAVISVSVQHDHHMRLQ

TXG70886.1 hypothetical protein EZV62_005821 [Acer yangbiense]3.0e-9979.04Show/hide
Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPK+EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLVLRYHAVYKLLRISFLF
        ANS AL PDWQIGECVAIWWRPNFET+MYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQ                       
Subjt:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLVLRYHAVYKLLRISFLF

Query:  SHSTAEIWTCYINDPTAVISVSVQHDHHM
          + +EIWT +IN  +  + + VQHD+++
Subjt:  SHSTAEIWTCYINDPTAVISVSVQHDHHM

XP_022147484.1 pre-mRNA cleavage factor Im 25 kDa subunit 2 [Momordica charantia]1.9e-9897.28Show/hide
Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLV
        ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQ  Y P++
Subjt:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLV

TrEMBL top hitse value%identityAlignment
A0A1R3JSN5 Cleavage and polyadenylation specificity factor subunit 57.7e-10180.17Show/hide
Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPK+EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLVLRYHAVYKLLRISFLF
        ANSPAL PDWQIGECVAIWWRPNFET+MYPYCPPHITKPKECKKLF+VHLSE+EYFAVPKNLKLLAVPLFELYDNVQ+              LLRI+   
Subjt:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLVLRYHAVYKLLRISFLF

Query:  SHSTAEIWTCYINDPTAVISVSVQHDHHMRLQ
             EIW  +IN  +A   + +QHD+ M L+
Subjt:  SHSTAEIWTCYINDPTAVISVSVQHDHHMRLQ

A0A2H5NMB3 Cleavage and polyadenylation specificity factor subunit 51.6e-10179.83Show/hide
Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPK+EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLVLRYHAVYKLLRISFLF
        ANSPAL PDWQIGECVAIWWRPNFET+MYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQ+              LL + FL+
Subjt:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLVLRYHAVYKLLRISFLF

Query:  --SHSTAEIWTCYINDPTAVISVSVQHDHHMRL
          ++  AEIW  Y N  +    + VQ+D+ + L
Subjt:  --SHSTAEIWTCYINDPTAVISVSVQHDHHMRL

A0A5C7IQY5 Pre-mRNA cleavage factor Im 25 kDa subunit1.5e-9979.04Show/hide
Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPK+EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLVLRYHAVYKLLRISFLF
        ANS AL PDWQIGECVAIWWRPNFET+MYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQ                       
Subjt:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLVLRYHAVYKLLRISFLF

Query:  SHSTAEIWTCYINDPTAVISVSVQHDHHM
          + +EIWT +IN  +  + + VQHD+++
Subjt:  SHSTAEIWTCYINDPTAVISVSVQHDHHM

A0A6J1D153 Pre-mRNA cleavage factor Im 25 kDa subunit9.4e-9997.28Show/hide
Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLV
        ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQ  Y P++
Subjt:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLV

A0A6J1IEE3 Pre-mRNA cleavage factor Im 25 kDa subunit9.4e-9997.28Show/hide
Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLV
        ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQ  Y P++
Subjt:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLV

SwissProt top hitse value%identityAlignment
O43809 Cleavage and polyadenylation specificity factor subunit 56.0e-5862.72Show/hide
Query:  VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPAL
        +N YPL++YTFGTKEP  EKD+SVA R  RM+  + K GMR +VE +L+V EH+ PH+LLLQ+G TF KLPGG L PGE+E+EGLKR +T  LG     L
Subjt:  VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPAL

Query:  QPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDN
        Q DW I +C+  WWRPNFE   YPY P HITKPKE KKLF+V L E+  FAVPKN KL+A PLFELYDN
Subjt:  QPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDN

Q3ZCA2 Cleavage and polyadenylation specificity factor subunit 56.0e-5862.72Show/hide
Query:  VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPAL
        +N YPL++YTFGTKEP  EKD+SVA R  RM+  + K GMR +VE +L+V EH+ PH+LLLQ+G TF KLPGG L PGE+E+EGLKR +T  LG     L
Subjt:  VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPAL

Query:  QPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDN
        Q DW I +C+  WWRPNFE   YPY P HITKPKE KKLF+V L E+  FAVPKN KL+A PLFELYDN
Subjt:  QPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDN

Q5RAI8 Cleavage and polyadenylation specificity factor subunit 56.0e-5862.72Show/hide
Query:  VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPAL
        +N YPL++YTFGTKEP  EKD+SVA R  RM+  + K GMR +VE +L+V EH+ PH+LLLQ+G TF KLPGG L PGE+E+EGLKR +T  LG     L
Subjt:  VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPAL

Query:  QPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDN
        Q DW I +C+  WWRPNFE   YPY P HITKPKE KKLF+V L E+  FAVPKN KL+A PLFELYDN
Subjt:  QPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDN

Q8GXS3 Pre-mRNA cleavage factor Im 25 kDa subunit 22.4e-9186.41Show/hide
Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        M  S VVNTYPLS+Y+FGTKEPKLEKDTSVADRLARMK+NYMKEGMRTSVE ILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENE +GLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLV
         NS AL PDW +GECVA WWRPNFET+MYPYCPPHITKPKECK+L+IVHLSE+EYFAVPKNLKLLAVPLFELYDNVQ  Y P++
Subjt:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLV

Q9CQF3 Cleavage and polyadenylation specificity factor subunit 56.0e-5862.72Show/hide
Query:  VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPAL
        +N YPL++YTFGTKEP  EKD+SVA R  RM+  + K GMR +VE +L+V EH+ PH+LLLQ+G TF KLPGG L PGE+E+EGLKR +T  LG     L
Subjt:  VNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPAL

Query:  QPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDN
        Q DW I +C+  WWRPNFE   YPY P HITKPKE KKLF+V L E+  FAVPKN KL+A PLFELYDN
Subjt:  QPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDN

Arabidopsis top hitse value%identityAlignment
AT4G25550.1 Cleavage/polyadenylation specificity factor, 25kDa subunit1.7e-9286.41Show/hide
Query:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG
        M  S VVNTYPLS+Y+FGTKEPKLEKDTSVADRLARMK+NYMKEGMRTSVE ILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENE +GLKRKLTSKLG
Subjt:  MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG

Query:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLV
         NS AL PDW +GECVA WWRPNFET+MYPYCPPHITKPKECK+L+IVHLSE+EYFAVPKNLKLLAVPLFELYDNVQ  Y P++
Subjt:  ANSPALQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLV

AT4G29820.1 homolog of CFIM-254.4e-5658.24Show/hide
Query:  VVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPA
        +V+ YPLSSY FG+KE    KD  ++DR+ R+K NY   G+RT VEA+LLV+  KHPH+LLLQ  N+  KLPGGRL+PGE++IEGLKRKL SKL  N   
Subjt:  VVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPA

Query:  LQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDN
            +++GEC+ +WWRPNFET+MYP+ PP+I  PKEC KLF+V L   + F VPKN KLLAVPL +L++N
Subjt:  LQPDWQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGACGTCGCCGGTGGTGAACACTTATCCACTTTCCAGCTACACCTTCGGCACCAAAGAGCCGAAGCTCGAGAAGGACACCTCCGTCGCTGATCGTCTTGCTCGCAT
GAAAGTCAACTATATGAAGGAAGGCATGAGGACGAGTGTTGAAGCAATTCTGCTGGTGCAAGAACATAAGCATCCCCATATTCTACTTCTGCAAATTGGAAATACCTTTT
GCAAGCTCCCCGGGGGCCGGTTGAAGCCAGGAGAAAATGAGATTGAAGGTTTAAAGAGGAAACTGACAAGCAAACTGGGTGCAAATTCACCTGCCCTCCAGCCTGATTGG
CAGATTGGTGAATGTGTGGCTATATGGTGGAGACCAAACTTTGAAACTGTTATGTATCCTTATTGTCCTCCTCATATTACGAAACCCAAGGAATGCAAAAAGCTTTTCAT
TGTTCATTTGTCTGAAAGAGAGTACTTCGCGGTTCCTAAAAATTTGAAGCTGCTTGCAGTTCCTTTGTTTGAGCTCTATGACAATGTTCAATACATGTATATCCCATTAG
TCTTAAGATACCATGCTGTTTATAAGCTGCTAAGAATTAGTTTTCTGTTTTCGCACTCGACCGCAGAGATATGGACCTGTTATATCAACGATCCCACAGCAGTTATCTCG
GTTTCAGTTCAACATGATCACCACATGAGATTGCAAGACAGGAACTCGAAATTTGTAGCAGGCACAGACTCCAATTTGCAGCAGCGGGAACTTCTTATTGGCTTAGTTAG
AACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGACGTCGCCGGTGGTGAACACTTATCCACTTTCCAGCTACACCTTCGGCACCAAAGAGCCGAAGCTCGAGAAGGACACCTCCGTCGCTGATCGTCTTGCTCGCAT
GAAAGTCAACTATATGAAGGAAGGCATGAGGACGAGTGTTGAAGCAATTCTGCTGGTGCAAGAACATAAGCATCCCCATATTCTACTTCTGCAAATTGGAAATACCTTTT
GCAAGCTCCCCGGGGGCCGGTTGAAGCCAGGAGAAAATGAGATTGAAGGTTTAAAGAGGAAACTGACAAGCAAACTGGGTGCAAATTCACCTGCCCTCCAGCCTGATTGG
CAGATTGGTGAATGTGTGGCTATATGGTGGAGACCAAACTTTGAAACTGTTATGTATCCTTATTGTCCTCCTCATATTACGAAACCCAAGGAATGCAAAAAGCTTTTCAT
TGTTCATTTGTCTGAAAGAGAGTACTTCGCGGTTCCTAAAAATTTGAAGCTGCTTGCAGTTCCTTTGTTTGAGCTCTATGACAATGTTCAATACATGTATATCCCATTAG
TCTTAAGATACCATGCTGTTTATAAGCTGCTAAGAATTAGTTTTCTGTTTTCGCACTCGACCGCAGAGATATGGACCTGTTATATCAACGATCCCACAGCAGTTATCTCG
GTTTCAGTTCAACATGATCACCACATGAGATTGCAAGACAGGAACTCGAAATTTGTAGCAGGCACAGACTCCAATTTGCAGCAGCGGGAACTTCTTATTGGCTTAGTTAG
AACTTAG
Protein sequenceShow/hide protein sequence
MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALQPDW
QIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQYMYIPLVLRYHAVYKLLRISFLFSHSTAEIWTCYINDPTAVIS
VSVQHDHHMRLQDRNSKFVAGTDSNLQQRELLIGLVRT