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Lag0020806 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020806
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionhistone deacetylase complex subunit SAP18-like
Genome locationchr7:2247049..2249456
RNA-Seq ExpressionLag0020806
SyntenyLag0020806
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
InterPro domainsIPR010516 - Sin3 associated polypeptide p18
IPR042534 - Sin3 associated polypeptide p18 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147400.1 histone deacetylase complex subunit SAP18 [Momordica charantia]2.1e-7393.24Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PH PPRPR+EPVDREKTCPLLLRVFTK+G HHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII
        LVYPDRHGRF+VREVGKTFSFG GRLDD+LALA LGFQIGDYLDVAI+
Subjt:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII

XP_022943948.1 histone deacetylase complex subunit SAP18-like [Cucurbita moschata]6.6e-7595.95Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PHAPPRPR+EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII
        LVYPDRHGRF+VREVGKTFSFG GR DDNLALA LGFQIGDYLDVAII
Subjt:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII

XP_022974173.1 histone deacetylase complex subunit SAP18-like [Cucurbita maxima]6.6e-7595.95Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PHAPPRPR+EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII
        LVYPDRHGRF+VREVGKTFSFG GR DDNLALA LGFQIGDYLDVAII
Subjt:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII

XP_023538738.1 histone deacetylase complex subunit SAP18 [Cucurbita pepo subsp. pepo]6.6e-7595.95Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PHAPPRPR+EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII
        LVYPDRHGRF+VREVGKTFSFG GR DDNLALA LGFQIGDYLDVAII
Subjt:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII

XP_038879427.1 histone deacetylase complex subunit SAP18 [Benincasa hispida]1.8e-7293.92Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGA PR  HAPPRPR+EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII
        LVYPDRHGRF++REVGKTFSFG GRLDD+LALA LGFQIGDYLDVAII
Subjt:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII

TrEMBL top hitse value%identityAlignment
A0A1S3AVL4 histone deacetylase complex subunit SAP181.1e-7293.24Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR  HAPPRPR+EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII
        LVYPDRHGRF++REVGKTFSFG  RLDD+LAL  LGFQIGDYLDVAII
Subjt:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII

A0A5D3D2K7 Histone deacetylase complex subunit SAP181.1e-7293.24Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR  HAPPRPR+EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII
        LVYPDRHGRF++REVGKTFSFG  RLDD+LAL  LGFQIGDYLDVAII
Subjt:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII

A0A6J1D024 histone deacetylase complex subunit SAP181.0e-7393.24Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PH PPRPR+EPVDREKTCPLLLRVFTK+G HHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII
        LVYPDRHGRF+VREVGKTFSFG GRLDD+LALA LGFQIGDYLDVAI+
Subjt:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII

A0A6J1FXI8 histone deacetylase complex subunit SAP18-like3.2e-7595.95Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PHAPPRPR+EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII
        LVYPDRHGRF+VREVGKTFSFG GR DDNLALA LGFQIGDYLDVAII
Subjt:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII

A0A6J1IFF7 histone deacetylase complex subunit SAP18-like3.2e-7595.95Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PHAPPRPR+EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII
        LVYPDRHGRF+VREVGKTFSFG GR DDNLALA LGFQIGDYLDVAII
Subjt:  LVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII

SwissProt top hitse value%identityAlignment
O00422 Histone deacetylase complex subunit SAP189.7e-2953.72Show/hide
Query:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFLVREVGKTFSFGTGRL
        +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA+V+ D +   + V+E+G T S G    
Subjt:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFLVREVGKTFSFGTGRL

Query:  DDNLALAGLGFQIGDYLDVAI
        DD++ L    FQIGDYLD+AI
Subjt:  DDNLALAGLGFQIGDYLDVAI

O55128 Histone deacetylase complex subunit SAP181.3e-2853.72Show/hide
Query:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFLVREVGKTFSFGTGRL
        +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA+V+ D +   + V+E+G T S G    
Subjt:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFLVREVGKTFSFGTGRL

Query:  DDNLALAGLGFQIGDYLDVAI
        DD++ L    FQIGDYLD+AI
Subjt:  DDNLALAGLGFQIGDYLDVAI

O64644 Histone deacetylase complex subunit SAP182.3e-4666.67Show/hide
Query:  AEAPRRAYGA-----PPR-VPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS
        AEA RR  G      PPR V   PPRP+ EPVDREKTCPLLLRVFTK G HH +ED+AVRGKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LS
Subjt:  AEAPRRAYGA-----PPR-VPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS

Query:  FALVYPDRHGRFLVREVGKTFSFGTGRL-DDNLALAGLGFQIGDYLDVAI
        FA VYP+  G + VREVG+T ++   +  DD+  L+ L F+IGDYLDVAI
Subjt:  FALVYPDRHGRFLVREVGKTFSFGTGRL-DDNLALAGLGFQIGDYLDVAI

Q3T022 Histone deacetylase complex subunit SAP189.7e-2953.72Show/hide
Query:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFLVREVGKTFSFGTGRL
        +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA+V+ D +   + V+E+G T S G    
Subjt:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFLVREVGKTFSFGTGRL

Query:  DDNLALAGLGFQIGDYLDVAI
        DD++ L    FQIGDYLD+AI
Subjt:  DDNLALAGLGFQIGDYLDVAI

Q5RDT5 Histone deacetylase complex subunit SAP189.7e-2953.72Show/hide
Query:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFLVREVGKTFSFGTGRL
        +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA+V+ D +   + V+E+G T S G    
Subjt:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFLVREVGKTFSFGTGRL

Query:  DDNLALAGLGFQIGDYLDVAI
        DD++ L    FQIGDYLD+AI
Subjt:  DDNLALAGLGFQIGDYLDVAI

Arabidopsis top hitse value%identityAlignment
AT2G45640.1 SIN3 associated polypeptide P181.6e-4766.67Show/hide
Query:  AEAPRRAYGA-----PPR-VPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS
        AEA RR  G      PPR V   PPRP+ EPVDREKTCPLLLRVFTK G HH +ED+AVRGKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LS
Subjt:  AEAPRRAYGA-----PPR-VPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS

Query:  FALVYPDRHGRFLVREVGKTFSFGTGRL-DDNLALAGLGFQIGDYLDVAI
        FA VYP+  G + VREVG+T ++   +  DD+  L+ L F+IGDYLDVAI
Subjt:  FALVYPDRHGRFLVREVGKTFSFGTGRL-DDNLALAGLGFQIGDYLDVAI

AT2G45640.2 SIN3 associated polypeptide P181.3e-4464.67Show/hide
Query:  AEAPRRAYGA-----PPR-VPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS
        AEA RR  G      PPR V   PPRP+ EPVDREKTCPLLLRVFTK G HH +ED+AVRGKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LS
Subjt:  AEAPRRAYGA-----PPR-VPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS

Query:  FALVYPDRHGRFLVREVGKTFSFGTGRL-DDNLALAGLGFQIGDYLDVAI
        FA VYP+  G +    VG+T ++   +  DD+  L+ L F+IGDYLDVAI
Subjt:  FALVYPDRHGRFLVREVGKTFSFGTGRL-DDNLALAGLGFQIGDYLDVAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGAGAAGCAGAAGCTCCAAGGAGGGCTTATGGCGCTCCTCCAAGAGTCCCTCATGCTCCTCCTCGTCCTCGCATGGAGCCCGTCGATCGCGAAAAGACTTGTCC
TTTGCTGCTTCGTGTTTTTACGAAGATTGGGAGTCATCATTTCAATGAAGACTTTGCTGTGAGAGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATG
CTACTCTTCGCGAGCTAACTGATCTGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCTAAACTATCTTTCGCGTTGGTTTATCCTGATAGACATGGACGGTTT
CTAGTGAGAGAGGTAGGGAAGACATTCTCATTTGGAACTGGACGATTAGACGACAACTTGGCTTTGGCCGGACTTGGCTTTCAGATTGGAGACTACTTGGATGTGGCCAT
CATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGAGAAGCAGAAGCTCCAAGGAGGGCTTATGGCGCTCCTCCAAGAGTCCCTCATGCTCCTCCTCGTCCTCGCATGGAGCCCGTCGATCGCGAAAAGACTTGTCC
TTTGCTGCTTCGTGTTTTTACGAAGATTGGGAGTCATCATTTCAATGAAGACTTTGCTGTGAGAGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATG
CTACTCTTCGCGAGCTAACTGATCTGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCTAAACTATCTTTCGCGTTGGTTTATCCTGATAGACATGGACGGTTT
CTAGTGAGAGAGGTAGGGAAGACATTCTCATTTGGAACTGGACGATTAGACGACAACTTGGCTTTGGCCGGACTTGGCTTTCAGATTGGAGACTACTTGGATGTGGCCAT
CATATAG
Protein sequenceShow/hide protein sequence
MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRF
LVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII