; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0020868 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020868
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionB3 domain-containing protein
Genome locationchr7:2715324..2716456
RNA-Seq ExpressionLag0020868
SyntenyLag0020868
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR015300 - DNA-binding pseudobarrel domain superfamily
IPR044837 - B3 domain-containing protein REM16-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147119.1 B3 domain-containing protein Os04g0386900-like [Momordica charantia]4.9e-6279.59Show/hide
Query:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+E+  +E  T EP+N EI PL+ KP+HGVIL+KSHVAPI NM LPAKFHSVLPAI+I  VLYCG K+W +DYYGNRRGKSLDTR WRKFVNDNHLKS
Subjt:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID
        GDACVFEL+ECSSS LKFRVQILRGDIPV LHDKFSGE+KDTPI ID
Subjt:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID

XP_022941967.1 B3 domain-containing protein Os04g0386900-like [Cucurbita moschata]1.5e-6380.27Show/hide
Query:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+E+   E    +PQN  ILPL+GKPYHGVILSKSHVAPICNM LPAKFHSVLPAI+IPAVLYC  KKWKIDYYGNRRGK+LDT+QWRKFVNDNHLK 
Subjt:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID
        GDACVFELIECSSS++KFRVQILRGDIP  LH+KFSGE+++TPI ID
Subjt:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID

XP_022974195.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima]1.8e-6481.63Show/hide
Query:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+E+  TE    +PQN  ILPL+GKPYHGVILSKSHVAPICNM LPAKFHSVLPAI+IPAVLYC  KKWKIDYYGNRRGK+LDT+QWRKFVNDNHLK 
Subjt:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID
        GDACVFELIECSSS+LKFRVQILRGDIP  LH+KFSGE+++TPI ID
Subjt:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID

XP_023539026.1 B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo]5.2e-6480.27Show/hide
Query:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+E+  TE    +PQN  ILPL+GKPYHGVILSKSHVAPICNM +PAKFHSVLPAI+IPAVLYC  KKWKIDYYGNRRGK+LDT+QWRKFVNDNHLK 
Subjt:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID
        GDACVFELIECSSS++KFRVQILRGDIP  LH+KFSGE+++TPI ID
Subjt:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID

XP_038903804.1 B3 domain-containing protein Os04g0386900-like [Benincasa hispida]1.5e-6378.91Show/hide
Query:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+ +  TE  T EPQ+ EILPL+GKPYH  ILSKSHVAPIC++VLPAKFHS+LPAI+IPAVL+C  KKW IDYYGNRRGK+LDT+QWRKFVNDN LKS
Subjt:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID
        GDACVFEL+ECSSS+LKFRVQILRGDIP  LHDKFSGETKDTPI+++
Subjt:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID

TrEMBL top hitse value%identityAlignment
A0A0A0L3V3 TF-B3 domain-containing protein1.9e-5976.19Show/hide
Query:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS  +  TE  T EPQN E +PL+GKPYH  ILSKSHVAPI N+VLPAKFHS+LPAI+IPAVL C  KKWKIDY+GNRRGK+LD++QWRKFVNDN LKS
Subjt:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID
        GDA VFEL+ECSSS+LKFRVQIL GDIP+ LHDKFSGETK+TPI +D
Subjt:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID

A0A6J1CYN6 B3 domain-containing protein Os04g0386900-like7.3e-5671.43Show/hide
Query:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+E+  +E    EP+ DEI PL+ KP+HGVIL KSHVAP   M LPAKFHSVLPAI+I  V+YCG K+W++DYYGNRRG++LDTR WRKFV++NHLK 
Subjt:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID
        GDACVFEL+ECSSS++KFRVQILRGDIPV LHDKF GE++DTPI ID
Subjt:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID

A0A6J1D033 B3 domain-containing protein Os04g0386900-like2.4e-6279.59Show/hide
Query:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+E+  +E  T EP+N EI PL+ KP+HGVIL+KSHVAPI NM LPAKFHSVLPAI+I  VLYCG K+W +DYYGNRRGKSLDTR WRKFVNDNHLKS
Subjt:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID
        GDACVFEL+ECSSS LKFRVQILRGDIPV LHDKFSGE+KDTPI ID
Subjt:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID

A0A6J1FTK2 B3 domain-containing protein Os04g0386900-like7.3e-6480.27Show/hide
Query:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+E+   E    +PQN  ILPL+GKPYHGVILSKSHVAPICNM LPAKFHSVLPAI+IPAVLYC  KKWKIDYYGNRRGK+LDT+QWRKFVNDNHLK 
Subjt:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID
        GDACVFELIECSSS++KFRVQILRGDIP  LH+KFSGE+++TPI ID
Subjt:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID

A0A6J1IDC2 B3 domain-containing protein Os04g0386900-like8.7e-6581.63Show/hide
Query:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+E+  TE    +PQN  ILPL+GKPYHGVILSKSHVAPICNM LPAKFHSVLPAI+IPAVLYC  KKWKIDYYGNRRGK+LDT+QWRKFVNDNHLK 
Subjt:  MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID
        GDACVFELIECSSS+LKFRVQILRGDIP  LH+KFSGE+++TPI ID
Subjt:  GDACVFELIECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID

SwissProt top hitse value%identityAlignment
Q2QMT5 B3 domain-containing protein LOC_Os12g400909.7e-0527.62Show/hide
Query:  TEPQNDEILPLT----GKPYHGVILSKSHVAPICNMVLPAKF---HSVLPAIIIPAVLYCGDKKWKIDYYG-NRRGKSLDTRQWRKFVNDNHLKSGDACV
        T  + DEI  L     G P   V+L  +HV     +++P +F   H    +  I  +     +KW + YY  +   +  +  +W KF+ +N L+ G+ C+
Subjt:  TEPQNDEILPLT----GKPYHGVILSKSHVAPICNMVLPAKF---HSVLPAIIIPAVLYCGDKKWKIDYYG-NRRGKSLDTRQWRKFVNDNHLKSGDACV

Query:  FELIE
        FEL++
Subjt:  FELIE

Q7XLP4 B3 domain-containing protein Os04g03869006.3e-2040.77Show/hide
Query:  ILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELI---ECSSSLLK
        +LPL GKPY   I+ KSHV P   +V+P  F  +LP+   PA L    + W + + G R  + L+   WR F  DN L+ GD CVFEL+         ++
Subjt:  ILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELI---ECSSSLLK

Query:  FRVQILRGDIPVPLHDKFSGETKDTPIFID
        FRVQ+LR +IP  +  +  G T  TPI ID
Subjt:  FRVQILRGDIPVPLHDKFSGETKDTPIFID

Q8RYD1 B3 domain-containing protein REM166.1e-0734.34Show/hide
Query:  VILSKSHVAPICNMVLPAKFHSVLPAIII--PAVLYCGDKKW--KIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELIECSSSLLKFRVQILRGD
        V + +SHV   C + +P K+  V   +I     V+     KW  K + +G R    + T  W+KFV DN+L+ GD CVFE     +  L   V I RG+
Subjt:  VILSKSHVAPICNMVLPAKFHSVLPAIII--PAVLYCGDKKW--KIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELIECSSSLLKFRVQILRGD

Q9LHY9 B3 domain-containing protein Os06g01123007.2e-1640.32Show/hide
Query:  GKPYHGVILSKSHVAPICNMVLPAKFHSVL--PAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELIEC-SSSLLKFRVQI
        G P+   +++KSH+ P   M +P +F   L  P     AVL+ G K W   Y G+ + K LD   W +F  DN L  GDACVFEL+   ++  L+F+VQI
Subjt:  GKPYHGVILSKSHVAPICNMVLPAKFHSVL--PAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELIEC-SSSLLKFRVQI

Query:  LRGDIPVPLHDKFSGETKDTPIFI
        LRG +P  +     G T D PI I
Subjt:  LRGDIPVPLHDKFSGETKDTPIFI

Q9XIB5 B3 domain-containing protein REM197.4e-0530.08Show/hide
Query:  QSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKF-HSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        +  ER     +T EP N         PY  V+L  S++   C M LP+ F    L  I     L  G+K+W +     + G++  ++ W +F  +N++  
Subjt:  QSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKF-HSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELIECSSSLLK---FRV
        GD CVFEL+     +L+   FRV
Subjt:  GDACVFELIECSSSLLK---FRV

Arabidopsis top hitse value%identityAlignment
AT1G49480.1 related to vernalization1 15.3e-0630.08Show/hide
Query:  QSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKF-HSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        +  ER     +T EP N         PY  V+L  S++   C M LP+ F    L  I     L  G+K+W +     + G++  ++ W +F  +N++  
Subjt:  QSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKF-HSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELIECSSSLLK---FRV
        GD CVFEL+     +L+   FRV
Subjt:  GDACVFELIECSSSLLK---FRV

AT3G18990.1 AP2/B3-like transcriptional factor family protein3.4e-0529.27Show/hide
Query:  QSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKF-HSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        +  ER     +T EP N         P+  V+L  S++   C M LP+ F    L  I     +   +K+W +     + G++  ++ W +F  +N+L  
Subjt:  QSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKF-HSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELIECSSSLLK---FRV
        GD CVFEL+     +LK   FRV
Subjt:  GDACVFELIECSSSLLK---FRV

AT4G33280.1 AP2/B3-like transcriptional factor family protein4.3e-0834.34Show/hide
Query:  VILSKSHVAPICNMVLPAKFHSVLPAIII--PAVLYCGDKKW--KIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELIECSSSLLKFRVQILRGD
        V + +SHV   C + +P K+  V   +I     V+     KW  K + +G R    + T  W+KFV DN+L+ GD CVFE     +  L   V I RG+
Subjt:  VILSKSHVAPICNMVLPAKFHSVLPAIII--PAVLYCGDKKW--KIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELIECSSSLLKFRVQILRGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAGAAGAGAGACTTTCGACAGAGTTTGAAACAACGGAGCCGCAAAATGATGAAATTTTGCCCCTCACAGGAAAACCCTACCATGGCGTTATTCTTTCTAAATC
GCATGTCGCTCCCATTTGTAATATGGTTTTGCCAGCCAAATTTCATTCTGTTTTACCTGCTATCATAATCCCTGCGGTTCTTTACTGTGGGGACAAGAAATGGAAGATAG
ATTATTATGGGAACCGACGTGGTAAATCACTTGACACAAGACAGTGGAGGAAGTTTGTTAATGATAATCATCTCAAGTCTGGAGATGCTTGTGTATTTGAGCTAATAGAA
TGCAGCAGCAGCTTACTCAAATTCAGAGTTCAAATTCTCAGAGGTGACATCCCCGTCCCGCTGCACGACAAGTTCAGTGGGGAGACTAAAGACACCCCTATATTCATTGA
CTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCAGAAGAGAGACTTTCGACAGAGTTTGAAACAACGGAGCCGCAAAATGATGAAATTTTGCCCCTCACAGGAAAACCCTACCATGGCGTTATTCTTTCTAAATC
GCATGTCGCTCCCATTTGTAATATGGTTTTGCCAGCCAAATTTCATTCTGTTTTACCTGCTATCATAATCCCTGCGGTTCTTTACTGTGGGGACAAGAAATGGAAGATAG
ATTATTATGGGAACCGACGTGGTAAATCACTTGACACAAGACAGTGGAGGAAGTTTGTTAATGATAATCATCTCAAGTCTGGAGATGCTTGTGTATTTGAGCTAATAGAA
TGCAGCAGCAGCTTACTCAAATTCAGAGTTCAAATTCTCAGAGGTGACATCCCCGTCCCGCTGCACGACAAGTTCAGTGGGGAGACTAAAGACACCCCTATATTCATTGA
CTAG
Protein sequenceShow/hide protein sequence
MQSEERLSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELIE
CSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPIFID