; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0020948 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0020948
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L37a
Genome locationchr7:3322540..3323117
RNA-Seq ExpressionLag0020948
SyntenyLag0020948
Gene Ontology termsGO:0043229 - intracellular organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYI69747.1 hypothetical protein E1A91_D08G175200v1 [Gossypium mustelinum]1.3e-0961.9Show/hide
Query:  LSNQIKKMEATQHSKYFSEFCG------KAVEIGSCKRLWKGESRRCLLHIEHSKCCDRYEHN
        L  QIKKME +QHSKYF EFCG      KAV I  CK  WK ESR C LH EH KCCD  EH+
Subjt:  LSNQIKKMEATQHSKYFSEFCG------KAVEIGSCKRLWKGESRRCLLHIEHSKCCDRYEHN
XP_024366068.1 60S ribosomal protein L43-B-like isoform X2 [Physcomitrium patens]7.6e-0751.47Show/hide
Query:  LSNQIKKMEATQHSKYFSEFCGKAVEIGSC-----KRLWKGESRRCLLHIEHSKCCDRYEHNPKVEGA
        L  QIKKME +QHSKYF EFCGK     SC     +RLW+GE   C LH EH  CC   +H+   EG+
Subjt:  LSNQIKKMEATQHSKYFSEFCGKAVEIGSC-----KRLWKGESRRCLLHIEHSKCCDRYEHNPKVEGA
TrEMBL top hitse value%identityAlignment
A0A5D2TWY1 Uncharacterized protein6.1e-1061.9Show/hide
Query:  LSNQIKKMEATQHSKYFSEFCG------KAVEIGSCKRLWKGESRRCLLHIEHSKCCDRYEHN
        L  QIKKME +QHSKYF EFCG      KAV I  CK  WK ESR C LH EH KCCD  EH+
Subjt:  LSNQIKKMEATQHSKYFSEFCG------KAVEIGSCKRLWKGESRRCLLHIEHSKCCDRYEHN
A0A803R5K3 Uncharacterized protein9.7e-0851.47Show/hide
Query:  LSNQIKKMEATQHSKYFSEFCGKAVEIG----SCKRLWKGESRRCLLHIEHSKCCDRYEHNPKVEGAD
        L  QIKKME +QHSKYF EFC    E G      + LW+ ESRRC LH EH +C D  +++ K EGA+
Subjt:  LSNQIKKMEATQHSKYFSEFCGKAVEIG----SCKRLWKGESRRCLLHIEHSKCCDRYEHNPKVEGAD
SwissProt top hitse value%identityAlignment
P0DKK1 60S ribosomal protein L37a-16.3e-0462.16Show/hide
Query:  LSNQIKKMEATQHSKYFSEFCG------KAVEIGSCK
        L  QIKKME +QHSKYF EFCG      KAV I  CK
Subjt:  LSNQIKKMEATQHSKYFSEFCG------KAVEIGSCK
P0DKK2 60S ribosomal protein L37a-26.3e-0462.16Show/hide
Query:  LSNQIKKMEATQHSKYFSEFCG------KAVEIGSCK
        L  QIKKME +QHSKYF EFCG      KAV I  CK
Subjt:  LSNQIKKMEATQHSKYFSEFCG------KAVEIGSCK
Q9XHE4 60S ribosomal protein L37a4.8e-0458.54Show/hide
Query:  LSNQIKKMEATQHSKYFSEFCG------KAVEIGSCKRLWK
        L  QIKKME +QHSKYF EFCG      KAV I  CK   K
Subjt:  LSNQIKKMEATQHSKYFSEFCG------KAVEIGSCKRLWK
Arabidopsis top hitse value%identityAlignment
AT3G10950.1 Zinc-binding ribosomal protein family protein2.9e-0456.76Show/hide
Query:  LSNQIKKMEATQHSKYFSEFCG------KAVEIGSCK
        L  QIKKME +QH+KYF EFCG      K V I  CK
Subjt:  LSNQIKKMEATQHSKYFSEFCG------KAVEIGSCK
AT3G60245.1 Zinc-binding ribosomal protein family protein7.6e-0559.46Show/hide
Query:  LSNQIKKMEATQHSKYFSEFCG------KAVEIGSCK
        +  QIKKME +QHSKYF EFCG      KAV I  CK
Subjt:  LSNQIKKMEATQHSKYFSEFCG------KAVEIGSCK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCTGAGCAATCAGATTAAAAAGATGGAAGCTACTCAGCACAGCAAATACTTCAGCGAGTTCTGCGGAAAGGCTGTTGAGATAGGGAGTTGCAAGAGACTGTGGAA
AGGTGAAAGCCGGAGATGCTTACTACACATTGAACATAGCAAGTGCTGTGACCGTTACGAGCACAATCCGAAGGTCGAGGGAGCAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCCTGAGCAATCAGATTAAAAAGATGGAAGCTACTCAGCACAGCAAATACTTCAGCGAGTTCTGCGGAAAGGCTGTTGAGATAGGGAGTTGCAAGAGACTGTGGAA
AGGTGAAAGCCGGAGATGCTTACTACACATTGAACATAGCAAGTGCTGTGACCGTTACGAGCACAATCCGAAGGTCGAGGGAGCAGACTGA
Protein sequenceShow/hide protein sequence
MCLSNQIKKMEATQHSKYFSEFCGKAVEIGSCKRLWKGESRRCLLHIEHSKCCDRYEHNPKVEGAD