; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0021012 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021012
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionS-protein homolog
Genome locationchr7:3956256..3959080
RNA-Seq ExpressionLag0021012
SyntenyLag0021012
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582443.1 S-protein-like 24, partial [Cucurbita argyrosperma subsp. sororia]2.0e-6870.77Show/hide
Query:  AIVLLQKEPNANVQSGTTLVIILNLINHIGS------------SFSAFKSENVVGAHEDFPKELLSVDPIST------EQLYGIEYEVRVINGFTNNSSL
        AI    KEPNA++ SGTTLVI   L+NHIGS            S S   SE  +          L +    T      EQLYGIEYEVRVINGFTNNSSL
Subjt:  AIVLLQKEPNANVQSGTTLVIILNLINHIGS------------SFSAFKSENVVGAHEDFPKELLSVDPIST------EQLYGIEYEVRVINGFTNNSSL

Query:  PLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        PLVIWC+SKD DIGGRALQEHDDFSWPV+TNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKC+WLV+EDGFYFSDDEVNWKKDFSW
Subjt:  PLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

KAG7028781.1 hypothetical protein SDJN02_09962, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-6693.7Show/hide
Query:  ELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSAL
        E++SVDPIST+QLYGIEYEVRVINGFTNNSSLPLVIWC+SKDSDIGGRALQEHDDFSW VKTNFWITTTSQFSCTVKLDRTR+SFDAFKVPRDIYRCSA 
Subjt:  ELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSAL

Query:  RKCSWLVMEDGFYFSDDEVNWKKDFSW
        RKCSWLVMEDGFYFSDDEVNWKK+FSW
Subjt:  RKCSWLVMEDGFYFSDDEVNWKKDFSW

TYK17379.1 self-incompatibility family protein [Cucumis melo var. makuwa]3.9e-6490Show/hide
Query:  FPKELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRC
        FP   + V  +  EQL+GIEYEVRVINGFTNNSSLPLVIWC+SKD DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRC
Subjt:  FPKELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRC

Query:  SALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        SALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  SALRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_022147154.1 S-protein homolog 6-like [Momordica charantia]5.5e-6688.49Show/hide
Query:  ENVVGAHEDFPKELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAF
        +NV GAHEDF  E +SVD  STEQLYGIEYEVRVINGFTNNSSLPLVIWC+SKD+DIGGRALQEHDDF W V+TNFWI TTSQFSCTVKLDRTRKSFDAF
Subjt:  ENVVGAHEDFPKELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAF

Query:  KVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KVPRDIYRCS LRKCSWLVMEDGFYFSDDEV+WKKDFSW
Subjt:  KVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_038876719.1 S-protein homolog 6-like [Benincasa hispida]1.8e-6490.77Show/hide
Query:  FPKELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRC
        FP   + V  +  EQL+GIEYEVRVINGFTNNSSLPLVIWC+SKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRC
Subjt:  FPKELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRC

Query:  SALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        SALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  SALRKCSWLVMEDGFYFSDDEVNWKKDFSW

TrEMBL top hitse value%identityAlignment
A0A0A0L6V3 S-protein homolog1.0e-6277.36Show/hide
Query:  AFKSENVVGAHEDFPKE-------------LLSVDPIST--EQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWI-TT
        AF  +  +GA EDF +                    I T  EQL+GIEYEVRVINGFTNNSSLPLVIWC+SKD DIGGRALQEHDDFSWPVKTNFWI TT
Subjt:  AFKSENVVGAHEDFPKE-------------LLSVDPIST--EQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWI-TT

Query:  TSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        TSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  TSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A1S4DSD2 S-protein homolog4.7e-6389.31Show/hide
Query:  FPKELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKSFDAFKVPRDIYR
        FP   + V  +  EQL+GIEYEVRVINGFTNNSSLPLVIWC+SKD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKSFDAFKVPRDIYR
Subjt:  FPKELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKSFDAFKVPRDIYR

Query:  CSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        CSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  CSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5A7U6C9 S-protein homolog4.7e-6389.31Show/hide
Query:  FPKELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKSFDAFKVPRDIYR
        FP   + V  +  EQL+GIEYEVRVINGFTNNSSLPLVIWC+SKD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKSFDAFKVPRDIYR
Subjt:  FPKELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKSFDAFKVPRDIYR

Query:  CSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        CSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  CSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5D3D3G0 S-protein homolog1.9e-6490Show/hide
Query:  FPKELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRC
        FP   + V  +  EQL+GIEYEVRVINGFTNNSSLPLVIWC+SKD DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRC
Subjt:  FPKELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRC

Query:  SALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        SALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  SALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A6J1D066 S-protein homolog2.6e-6688.49Show/hide
Query:  ENVVGAHEDFPKELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAF
        +NV GAHEDF  E +SVD  STEQLYGIEYEVRVINGFTNNSSLPLVIWC+SKD+DIGGRALQEHDDF W V+TNFWI TTSQFSCTVKLDRTRKSFDAF
Subjt:  ENVVGAHEDFPKELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAF

Query:  KVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        KVPRDIYRCS LRKCSWLVMEDGFYFSDDEV+WKKDFSW
Subjt:  KVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 25.6e-0528.57Show/hide
Query:  DPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDI---YRCSALRK
        DP ST  ++        IN    N  L L+  C SKD D+G R LQ  + +S+     F+  T   + C+        SFD +K  RD     +C + R 
Subjt:  DPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDI---YRCSALRK

Query:  CSWLVMEDG-FYFSDDEVNWKKDFSW
        C W +  +G   F+D+   +   + W
Subjt:  CSWLVMEDG-FYFSDDEVNWKKDFSW

Arabidopsis top hitse value%identityAlignment
AT1G26798.1 Plant self-incompatibility protein S1 family2.1e-0733.68Show/hide
Query:  VRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRD---IYRCSALRKCSWLVMEDG
        V +IN  T N    LV+ C +K  D+G  AL+  +   +  + N   TTT  ++CT       K+FD F+V RD      C   R+C W + E G
Subjt:  VRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRD---IYRCSALRKCSWLVMEDG

AT3G24060.1 Plant self-incompatibility protein S1 family3.0e-3861.06Show/hide
Query:  GIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYF
        G E++VRVIN F +NSSLPLVIWC+S   D+GGRALQE DDF W  K + W +  ++++CT+K D  RK F+AFKV RD  RC + +KCSW V EDGFYF
Subjt:  GIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYF

Query:  SDDEVNWKKDFSW
        S DEV W KDFSW
Subjt:  SDDEVNWKKDFSW

AT4G16195.1 Plant self-incompatibility protein S1 family4.0e-0628.57Show/hide
Query:  DPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDI---YRCSALRK
        DP ST  ++        IN    N  L L+  C SKD D+G R LQ  + +S+     F+  T   + C+        SFD +K  RD     +C + R 
Subjt:  DPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDI---YRCSALRK

Query:  CSWLVMEDG-FYFSDDEVNWKKDFSW
        C W +  +G   F+D+   +   + W
Subjt:  CSWLVMEDG-FYFSDDEVNWKKDFSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCATGGATCAGTGATGTATGGTTCAGACCGTGCCATCGTTCTGTTGCAGAAGGAACCGAATGCCAATGTCCAGAGTGGAACCACTCTTGTCATCATTCTCAACCT
AATCAACCATATTGGTTCGAGCTTCAGTGCTTTCAAATCTGAAAATGTCGTCGGCGCTCACGAAGATTTTCCGAAGGAGTTACTTTCAGTCGACCCAATCAGTACAGAGC
AACTGTATGGCATCGAATACGAAGTTCGTGTGATCAATGGCTTCACAAACAACTCCTCACTGCCTCTGGTGATATGGTGCTCGTCCAAAGACAGTGATATTGGCGGGCGT
GCGCTCCAGGAGCATGATGATTTCAGTTGGCCCGTCAAGACCAACTTCTGGATTACTACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAGAGTTT
TGATGCATTCAAGGTACCAAGAGATATCTATCGCTGTAGTGCTCTCAGGAAATGCTCTTGGTTGGTTATGGAAGATGGATTCTATTTCAGTGACGATGAAGTCAACTGGA
AGAAGGATTTCTCGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCATGGATCAGTGATGTATGGTTCAGACCGTGCCATCGTTCTGTTGCAGAAGGAACCGAATGCCAATGTCCAGAGTGGAACCACTCTTGTCATCATTCTCAACCT
AATCAACCATATTGGTTCGAGCTTCAGTGCTTTCAAATCTGAAAATGTCGTCGGCGCTCACGAAGATTTTCCGAAGGAGTTACTTTCAGTCGACCCAATCAGTACAGAGC
AACTGTATGGCATCGAATACGAAGTTCGTGTGATCAATGGCTTCACAAACAACTCCTCACTGCCTCTGGTGATATGGTGCTCGTCCAAAGACAGTGATATTGGCGGGCGT
GCGCTCCAGGAGCATGATGATTTCAGTTGGCCCGTCAAGACCAACTTCTGGATTACTACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAGAGTTT
TGATGCATTCAAGGTACCAAGAGATATCTATCGCTGTAGTGCTCTCAGGAAATGCTCTTGGTTGGTTATGGAAGATGGATTCTATTTCAGTGACGATGAAGTCAACTGGA
AGAAGGATTTCTCGTGGTAA
Protein sequenceShow/hide protein sequence
MAHGSVMYGSDRAIVLLQKEPNANVQSGTTLVIILNLINHIGSSFSAFKSENVVGAHEDFPKELLSVDPISTEQLYGIEYEVRVINGFTNNSSLPLVIWCSSKDSDIGGR
ALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW