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Lag0021014 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021014
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr7:3982795..3989266
RNA-Seq ExpressionLag0021014
SyntenyLag0021014
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051728.1 uncharacterized protein E6C27_scaffold60G001140 [Cucumis melo var. makuwa]2.1e-0452Show/hide
Query:  LNSPMTDTHVVQPTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
        +NSP T TH +   S +  + Y +PY+LHH+D T+LVLV+ELL E NY S
Subjt:  LNSPMTDTHVVQPTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
KAA0056742.1 uncharacterized protein E6C27_scaffold486G00140 [Cucumis melo var. makuwa]2.4e-0571.05Show/hide
Query:  PTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
        PT  SV+ LY +PYYLHHSD TNL+LVS++LTES+YTS
Subjt:  PTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
TYK21022.1 uncharacterized protein E5676_scaffold778G00160 [Cucumis melo var. makuwa]1.6e-0468.42Show/hide
Query:  PTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
        PT  SV+ LY +PYYLHHSD TNL+LVS++LT S+YTS
Subjt:  PTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
XP_022142327.1 uncharacterized protein LOC111012468 [Momordica charantia]4.6e-0458.33Show/hide
Query:  SPMTDTHVVQPTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
        S  + TH V  T  S+++ Y++PYYLHHSD T+LVLVS+LL E+NYTS
Subjt:  SPMTDTHVVQPTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
TrEMBL top hitse value%identityAlignment
A0A5A7ULN0 Uncharacterized protein1.2e-0571.05Show/hide
Query:  PTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
        PT  SV+ LY +PYYLHHSD TNL+LVS++LTES+YTS
Subjt:  PTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
A0A5A7VKF4 Uncharacterized protein8.5e-0460.53Show/hide
Query:  PTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
        PT  S++ +Y + YYLHHSD  NL+L+S+LL ESNYTS
Subjt:  PTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
A0A5D3CMC2 Retrotran_gag_3 domain-containing protein1.0e-0452Show/hide
Query:  LNSPMTDTHVVQPTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
        +NSP T TH +   S +  + Y +PY+LHH+D T+LVLV+ELL E NY S
Subjt:  LNSPMTDTHVVQPTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
A0A5D3DBR6 Uncharacterized protein7.6e-0568.42Show/hide
Query:  PTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
        PT  SV+ LY +PYYLHHSD TNL+LVS++LT S+YTS
Subjt:  PTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
A0A6J1CMF8 uncharacterized protein LOC1110124682.2e-0458.33Show/hide
Query:  SPMTDTHVVQPTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
        S  + TH V  T  S+++ Y++PYYLHHSD T+LVLVS+LL E+NYTS
Subjt:  SPMTDTHVVQPTSQSVVDLYTSPYYLHHSDGTNLVLVSELLTESNYTS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTCGTGTACCTGGAATTCGGAGGTGTTTCGGGAAGAACCAGGAGAAACCAGGGCGATCCGGGGCATCAGGGGTCGAAAGGAGGTGAACGAGCTCGGCCTGCGCC
AGCGGGCCGAATGGTCGGCCTCGGCCTTTTGCCGAGGCCAACCACATGGCCCGACCCTTTGGCCCGGTCTTCCTCTGGATCGATTTTCTGGTCCTACCTTCGCCCGATTG
TCCTCGACAGCTTCTTGTTCGTCGGTAATTCTGGATTACTCAGCAAGAAGCTTGCCAACCTGAGGATACAACCAAGAAACGAATCACGGAGGAAAGCAAGACCGAAAGGA
TTGGGCAACGACCCAATCCTAGCCTTGGCCTCTCGGCCCACACAACTTCTCTCTTCCGCTCAGTTCTTGGTGCCCATGGTCAGCCCGGTTCGACTTGGTTCAGTCCATCG
TCTTCAAACACCTAGAAACCCTAAAACAGCTATTCAGTTGTATACATTCTTTGGCTATTTATACAGCCTTGATATTAATGAGGAAGTGAAGCAAGGTATTATTTACCTCT
CTCCTCTTAATATGGTATCAGATGAAATTTTGTTTTTGAGAGGTATTCTTAATTCTCCAATGACCGATACTCATGTTGTTCAACCCACCAGTCAATCCGTCGTGGATTTG
TATACCAGCCCCTATTATCTTCACCACTCTGATGGGACGAACCTCGTCCTCGTTTCAGAACTCCTCACCGAATCCAATTATACCTCTTGTGGAGAAAAGCCAAACCCTAG
AAAGAAAATCCCCAATGAAAATAAAAGCAACCAGACTCCAAAATCCGCCAATGTGGACCGTCGGATTTCGACATCACAAGCGCCTAGTGGCGATCCAGATGGTGATGACT
TAAGAGTCGGCCACTTTTATTGGGCCCCCCGCCTCTCCAATCCCGTGAGCTCAACGGGCCCATGGGCTTTCCGGGGCCCATCTCCCTTCGTGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTCGTGTACCTGGAATTCGGAGGTGTTTCGGGAAGAACCAGGAGAAACCAGGGCGATCCGGGGCATCAGGGGTCGAAAGGAGGTGAACGAGCTCGGCCTGCGCC
AGCGGGCCGAATGGTCGGCCTCGGCCTTTTGCCGAGGCCAACCACATGGCCCGACCCTTTGGCCCGGTCTTCCTCTGGATCGATTTTCTGGTCCTACCTTCGCCCGATTG
TCCTCGACAGCTTCTTGTTCGTCGGTAATTCTGGATTACTCAGCAAGAAGCTTGCCAACCTGAGGATACAACCAAGAAACGAATCACGGAGGAAAGCAAGACCGAAAGGA
TTGGGCAACGACCCAATCCTAGCCTTGGCCTCTCGGCCCACACAACTTCTCTCTTCCGCTCAGTTCTTGGTGCCCATGGTCAGCCCGGTTCGACTTGGTTCAGTCCATCG
TCTTCAAACACCTAGAAACCCTAAAACAGCTATTCAGTTGTATACATTCTTTGGCTATTTATACAGCCTTGATATTAATGAGGAAGTGAAGCAAGGTATTATTTACCTCT
CTCCTCTTAATATGGTATCAGATGAAATTTTGTTTTTGAGAGGTATTCTTAATTCTCCAATGACCGATACTCATGTTGTTCAACCCACCAGTCAATCCGTCGTGGATTTG
TATACCAGCCCCTATTATCTTCACCACTCTGATGGGACGAACCTCGTCCTCGTTTCAGAACTCCTCACCGAATCCAATTATACCTCTTGTGGAGAAAAGCCAAACCCTAG
AAAGAAAATCCCCAATGAAAATAAAAGCAACCAGACTCCAAAATCCGCCAATGTGGACCGTCGGATTTCGACATCACAAGCGCCTAGTGGCGATCCAGATGGTGATGACT
TAAGAGTCGGCCACTTTTATTGGGCCCCCCGCCTCTCCAATCCCGTGAGCTCAACGGGCCCATGGGCTTTCCGGGGCCCATCTCCCTTCGTGACATAA
Protein sequenceShow/hide protein sequence
MEVVYLEFGGVSGRTRRNQGDPGHQGSKGGERARPAPAGRMVGLGLLPRPTTWPDPLARSSSGSIFWSYLRPIVLDSFLFVGNSGLLSKKLANLRIQPRNESRRKARPKG
LGNDPILALASRPTQLLSSAQFLVPMVSPVRLGSVHRLQTPRNPKTAIQLYTFFGYLYSLDINEEVKQGIIYLSPLNMVSDEILFLRGILNSPMTDTHVVQPTSQSVVDL
YTSPYYLHHSDGTNLVLVSELLTESNYTSCGEKPNPRKKIPNENKSNQTPKSANVDRRISTSQAPSGDPDGDDLRVGHFYWAPRLSNPVSSTGPWAFRGPSPFVT