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Lag0021043 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021043
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr7:4173957..4174364
RNA-Seq ExpressionLag0021043
SyntenyLag0021043
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RID46557.1 hypothetical protein BRARA_I03208 [Brassica rapa]7.0e-0732.56Show/hide
Query:  VWKARNGQVFENKSNDVE----LSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGNPW----PTVWVDAAWLKESYVTGLGLVYRGPDGVTW-DE
        +WKARN ++F  K  DV     L   S+  E       +EE+   ++    +   ++E G PW    PT  +DA+W+    V+GLG   +   G  +   
Subjt:  VWKARNGQVFENKSNDVE----LSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGNPW----PTVWVDAAWLKESYVTGLGLVYRGPDGVTW-DE

Query:  KACHGGYSLSSLHAEGKAVLWSLNCAREK
        +ACH   SLS+LHAE + +LW+ +C R +
Subjt:  KACHGGYSLSSLHAEGKAVLWSLNCAREK

XP_013649372.1 uncharacterized protein LOC106354069 [Brassica napus]7.0e-0731.82Show/hide
Query:  LWRVWKARNGQVFENK--SNDVELSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGN-------PWPTVWVDAAWLKESYVTGLGLVYRGPDGV-
        LW +WKARN ++F  +  S    L + SV  E  + +   E+     E  RSA    + +           PT  +DA+W+    V+GLG  Y+ P G+ 
Subjt:  LWRVWKARNGQVFENK--SNDVELSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGN-------PWPTVWVDAAWLKESYVTGLGLVYRGPDGV-

Query:  TWDEKACHGGYSLSSLHAEGKAVLWSLNCARE
         +  + C    SLS+LHAE + ++W+++C RE
Subjt:  TWDEKACHGGYSLSSLHAEGKAVLWSLNCARE

XP_018463519.1 PREDICTED: uncharacterized protein LOC108834691 [Raphanus sativus]2.4e-0733.6Show/hide
Query:  LWRVWKARNGQVFENK--SNDVELSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGNPWPTVWVDAAWLKESYVTGLGLVYRGPDGV-TWDEKAC
        LW +WKARN +VF  K  S    L + S+  E        +E               I      PT  VDA+W+    V+GLG  Y+   GV  +  + C
Subjt:  LWRVWKARNGQVFENK--SNDVELSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGNPWPTVWVDAAWLKESYVTGLGLVYRGPDGV-TWDEKAC

Query:  HGGYSLSSLHAEGKAVLWSLNCARE
            SLSSLHAE + ++W+++C RE
Subjt:  HGGYSLSSLHAEGKAVLWSLNCARE

XP_018474361.1 PREDICTED: uncharacterized protein LOC108845698 [Raphanus sativus]1.8e-0733.86Show/hide
Query:  WRVWKARNGQVFENKSNDVELSIVSVREEV--GEFMRTREESGCGREMGRSATEQQIENGNPW----PTVWVDAAWLKESYVTGLGLVYRGPDG-VTWDE
        W +WKARN ++F  K   V   + ++R      E  RT  E         S    ++E   PW    PT  +DA+W+    V+GLG  ++   G V++ +
Subjt:  WRVWKARNGQVFENKSNDVELSIVSVREEV--GEFMRTREESGCGREMGRSATEQQIENGNPW----PTVWVDAAWLKESYVTGLGLVYRGPDG-VTWDE

Query:  KACHGGYSLSSLHAEGKAVLWSLNCAR
        KAC    SLS+LHAE + +LW+ +C R
Subjt:  KACHGGYSLSSLHAEGKAVLWSLNCAR

XP_022562347.1 uncharacterized protein LOC106421437 [Brassica napus]3.1e-0731.2Show/hide
Query:  LWRVWKARNGQVFENK--SNDVELSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGNPWPTVWVDAAWLKESYVTGLGLVYRGPDGV-TWDEKAC
        LW +WKARN ++F  +  S    L + SV  E        E+          +    +      PT  +DA+W+ +  V+GLG  Y+ P GV  +  + C
Subjt:  LWRVWKARNGQVFENK--SNDVELSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGNPWPTVWVDAAWLKESYVTGLGLVYRGPDGV-TWDEKAC

Query:  HGGYSLSSLHAEGKAVLWSLNCARE
            SLS+LHAE + ++W+++C RE
Subjt:  HGGYSLSSLHAEGKAVLWSLNCARE

TrEMBL top hitse value%identityAlignment
A0A397Y035 RNase H domain-containing protein3.4e-0732.56Show/hide
Query:  VWKARNGQVFENKSNDVE----LSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGNPW----PTVWVDAAWLKESYVTGLGLVYRGPDGVTW-DE
        +WKARN ++F  K  DV     L   S+  E       +EE+   ++    +   ++E G PW    PT  +DA+W+    V+GLG   +   G  +   
Subjt:  VWKARNGQVFENKSNDVE----LSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGNPW----PTVWVDAAWLKESYVTGLGLVYRGPDGVTW-DE

Query:  KACHGGYSLSSLHAEGKAVLWSLNCAREK
        +ACH   SLS+LHAE + +LW+ +C R +
Subjt:  KACHGGYSLSSLHAEGKAVLWSLNCAREK

A0A6D2JVB2 Uncharacterized protein7.6e-0731.71Show/hide
Query:  LWRVWKARNGQVFENKSNDVELSIVSVREEVGEFMRTREESGCGREMGRSAT--EQQIENGNPWPTVWVDAAWLKESYVTGLGLVYRGPDGVTWDEKACH
        LWR+WK RN  VF+ K   V+ ++  V+E+  E+ R+REE   G++  R++T  ++       W     D AW KE    GLG V R  +G      A  
Subjt:  LWRVWKARNGQVFENKSNDVELSIVSVREEVGEFMRTREESGCGREMGRSAT--EQQIENGNPWPTVWVDAAWLKESYVTGLGLVYRGPDGVTWDEKACH

Query:  GGYSLSSLHAEGKAVLWSLNCAR
           + + + AE +A+ W++   R
Subjt:  GGYSLSSLHAEGKAVLWSLNCAR

A0A6J0K8E8 uncharacterized protein LOC1088156559.9e-0734.92Show/hide
Query:  LWRVWKARNGQVFENK--SNDVELSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGNP-WPTVWVDAAWLKESYVTGLGLVYRGPDGV-TWDEKA
        LW +WKARN +VF  K  S    L + S+  E         E G   E+  + +       NP  PT  +DA+W+    V+GLG  Y+   GV  +  + 
Subjt:  LWRVWKARNGQVFENK--SNDVELSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGNP-WPTVWVDAAWLKESYVTGLGLVYRGPDGV-TWDEKA

Query:  CHGGYSLSSLHAEGKAVLWSLNCARE
        C    SLS+LHAE + ++W+L C RE
Subjt:  CHGGYSLSSLHAEGKAVLWSLNCARE

A0A6J0LUR2 uncharacterized protein LOC1088346911.2e-0733.6Show/hide
Query:  LWRVWKARNGQVFENK--SNDVELSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGNPWPTVWVDAAWLKESYVTGLGLVYRGPDGV-TWDEKAC
        LW +WKARN +VF  K  S    L + S+  E        +E               I      PT  VDA+W+    V+GLG  Y+   GV  +  + C
Subjt:  LWRVWKARNGQVFENK--SNDVELSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGNPWPTVWVDAAWLKESYVTGLGLVYRGPDGV-TWDEKAC

Query:  HGGYSLSSLHAEGKAVLWSLNCARE
            SLSSLHAE + ++W+++C RE
Subjt:  HGGYSLSSLHAEGKAVLWSLNCARE

A0A6J0N674 uncharacterized protein LOC1088505751.7e-0634.92Show/hide
Query:  LWRVWKARNGQVFENK--SNDVELSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGNP-WPTVWVDAAWLKESYVTGLGLVYRGPDGV-TWDEKA
        LW +WKARN +VF  K  S    L + S+  E         E G   E+  + +       NP  PT  +DA+W+    V+GLG  Y    GV  +  + 
Subjt:  LWRVWKARNGQVFENK--SNDVELSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGNP-WPTVWVDAAWLKESYVTGLGLVYRGPDGV-TWDEKA

Query:  CHGGYSLSSLHAEGKAVLWSLNCARE
        C    SLS+LHAE + ++W+L C RE
Subjt:  CHGGYSLSSLHAEGKAVLWSLNCARE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G25270.1 Ribonuclease H-like superfamily protein1.6e-0425Show/hide
Query:  LWRVWKARNGQVFENKSNDVELSIVSVREEVGEFMRTRE-ESGCGREMGRSATEQQIENGNPW---PTVWV----DAAWLKESYVTGLGLVYRGPDGVTW
        LWR+WK+RN  VF+ KS   + ++   R +V E+  T        +++  S  +Q       W   P+ W+    D A+  ++     G + R  +GV  
Subjt:  LWRVWKARNGQVFENKSNDVELSIVSVREEVGEFMRTRE-ESGCGREMGRSATEQQIENGNPW---PTVWV----DAAWLKESYVTGLGLVYRGPDGVTW

Query:  DEKACHGGYSLSSLHAEGKAVLWSLNCA
              G  +  SL +E +A++ ++  A
Subjt:  DEKACHGGYSLSSLHAEGKAVLWSLNCA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGGCGTTATGCTTTCTCGCCTTTGGGTTGTGGAGGGTATGGAAGGCAAGAAATGGGCAGGTGTTTGAGAACAAGAGCAACGATGTGGAGCTATCCATTGTCTC
TGTGAGAGAGGAGGTTGGAGAGTTCATGAGAACGAGGGAGGAAAGCGGATGTGGAAGGGAAATGGGGCGTAGTGCAACTGAACAACAGATAGAAAATGGGAACCCATGGC
CAACAGTCTGGGTTGATGCGGCTTGGCTCAAGGAGTCGTATGTTACTGGATTGGGACTGGTTTACAGGGGACCAGATGGAGTCACGTGGGATGAGAAGGCGTGTCATGGT
GGATATAGCCTGAGCAGCCTGCATGCGGAAGGCAAAGCAGTTTTGTGGAGCCTGAACTGTGCCAGAGAGAAGTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGGCGTTATGCTTTCTCGCCTTTGGGTTGTGGAGGGTATGGAAGGCAAGAAATGGGCAGGTGTTTGAGAACAAGAGCAACGATGTGGAGCTATCCATTGTCTC
TGTGAGAGAGGAGGTTGGAGAGTTCATGAGAACGAGGGAGGAAAGCGGATGTGGAAGGGAAATGGGGCGTAGTGCAACTGAACAACAGATAGAAAATGGGAACCCATGGC
CAACAGTCTGGGTTGATGCGGCTTGGCTCAAGGAGTCGTATGTTACTGGATTGGGACTGGTTTACAGGGGACCAGATGGAGTCACGTGGGATGAGAAGGCGTGTCATGGT
GGATATAGCCTGAGCAGCCTGCATGCGGAAGGCAAAGCAGTTTTGTGGAGCCTGAACTGTGCCAGAGAGAAGTGTTGA
Protein sequenceShow/hide protein sequence
MEEALCFLAFGLWRVWKARNGQVFENKSNDVELSIVSVREEVGEFMRTREESGCGREMGRSATEQQIENGNPWPTVWVDAAWLKESYVTGLGLVYRGPDGVTWDEKACHG
GYSLSSLHAEGKAVLWSLNCAREKC