; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0021080 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021080
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description50S ribosomal protein L28
Genome locationchr7:4458288..4459062
RNA-Seq ExpressionLag0021080
SyntenyLag0021080
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001383 - Ribosomal protein L28
IPR026569 - Ribosomal protein L28/L24
IPR034704 - L28p-like
IPR037147 - Ribosomal protein L28/L24 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008438484.1 PREDICTED: 50S ribosomal protein L28, chloroplastic [Cucumis melo]1.1e-6490.67Show/hide
Query:  MAASVMLGMSPVNTS-GVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISP-PLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKL
        MAASV+ G +P  TS GVMA SSTKLHFRTKPNSDLGFL SQLSGIKISSNHSLISPSPISP PLRP+LQP+ARR+CPFTGKKANKKNLVSFSNHKTKKL
Subjt:  MAASVMLGMSPVNTS-GVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISP-PLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKL

Query:  QFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        QFVNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  QFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

XP_022145908.1 50S ribosomal protein L28, chloroplastic [Momordica charantia]6.8e-6490.54Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
        MAASV+LG+SP NTSGVMAASST+LHFRTK NS+LGFLTSQL GIKISSN+S I  +PIS PLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF

Query:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        VNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

XP_022979375.1 50S ribosomal protein L28, chloroplastic [Cucurbita maxima]4.3e-6691.22Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
        MA S +LG +PV++SGVMAASS+KLHFRTKPN +LGFL+SQLSGIKISSNHSLISPSPIS PLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF

Query:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        VNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

XP_023526300.1 50S ribosomal protein L28, chloroplastic [Cucurbita pepo subsp. pepo]2.3e-6489.86Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
        MA S +LG +PV +SGVMAASS+KLHFRTKPN +LGFL+SQLSGIKISSNHSLIS SPIS PLRPALQPVARRVCPFTGKKAN+KNLVSFSNHKTKKLQF
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF

Query:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        VNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

XP_038885053.1 50S ribosomal protein L28, chloroplastic [Benincasa hispida]2.8e-6591.22Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
        MAA V+LG +P  +SGVMAASSTKL F TKPNS+LGFLTSQL+GIKISSNHSLISPSPIS PLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF

Query:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        VNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

TrEMBL top hitse value%identityAlignment
A0A1S3AWK5 50S ribosomal protein L28, chloroplastic5.1e-6590.67Show/hide
Query:  MAASVMLGMSPVNTS-GVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISP-PLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKL
        MAASV+ G +P  TS GVMA SSTKLHFRTKPNSDLGFL SQLSGIKISSNHSLISPSPISP PLRP+LQP+ARR+CPFTGKKANKKNLVSFSNHKTKKL
Subjt:  MAASVMLGMSPVNTS-GVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISP-PLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKL

Query:  QFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        QFVNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  QFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

A0A5A7U1W6 50S ribosomal protein L285.1e-6590.67Show/hide
Query:  MAASVMLGMSPVNTS-GVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISP-PLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKL
        MAASV+ G +P  TS GVMA SSTKLHFRTKPNSDLGFL SQLSGIKISSNHSLISPSPISP PLRP+LQP+ARR+CPFTGKKANKKNLVSFSNHKTKKL
Subjt:  MAASVMLGMSPVNTS-GVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISP-PLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKL

Query:  QFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        QFVNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  QFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

A0A6J1CX73 50S ribosomal protein L28, chloroplastic3.3e-6490.54Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
        MAASV+LG+SP NTSGVMAASST+LHFRTK NS+LGFLTSQL GIKISSN+S I  +PIS PLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF

Query:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        VNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

A0A6J1E916 50S ribosomal protein L28, chloroplastic1.3e-6389.19Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
        MA S +LG +PV +SGVMAASS+KLHFR+K N +LGFL+SQLSGIKISSNHSLIS SPIS PLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF

Query:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        VNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

A0A6J1IT28 50S ribosomal protein L28, chloroplastic2.1e-6691.22Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
        MA S +LG +PV++SGVMAASS+KLHFRTKPN +LGFL+SQLSGIKISSNHSLISPSPIS PLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF

Query:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        VNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

SwissProt top hitse value%identityAlignment
B8HUV7 50S ribosomal protein L284.8e-2064Show/hide
Query:  RVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK
        RVC  TGK+AN    VS S+ +TKKLQ VNLQ+K++WW  GKR+V+LRLSTKALKT+E  GLD+ A++AGIDL K
Subjt:  RVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK

O22795 50S ribosomal protein L28, chloroplastic1.0e-4167.36Show/hide
Query:  MSPVNTSGV---MAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQP-VARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQ
        M+ + T G    M +S+  +   T  + +LGFLTSQLSG++IS   S +  + IS P  P +QP VARR+CPFTGKKAN+ N VSFSNHKTKKLQFVNLQ
Subjt:  MSPVNTSGV---MAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQP-VARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQ

Query:  YKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        YK+VWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRK+
Subjt:  YKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

P30956 50S ribosomal protein L28, chloroplastic3.0e-4675.21Show/hide
Query:  RTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLSTKALK
        ++K +S+L F+TSQLSG+KISS H + S +P+S P +P+LQPVARR+CPFTGKK+N+ N VS SNHKTKKLQFVNLQYK++WWEAGKRYVKLRLSTKA+K
Subjt:  RTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLSTKALK

Query:  TIEKNGLDAVAKKAGIDLRKE
        TIEKNGLDAVAKKAGIDL K+
Subjt:  TIEKNGLDAVAKKAGIDLRKE

P82245 50S ribosomal protein L28, chloroplastic7.4e-4570.39Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPN---SDLGFLTSQLSGIKISSNHSL-ISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTK
        MAAS ML  +P N        S  L    KP    S+LGFLTSQLSGI+IS +    I   PIS PL+P+LQPVARR+CPFTGKK+NK N VS SNHKTK
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPN---SDLGFLTSQLSGIKISSNHSL-ISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTK

Query:  KLQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        +LQFVNLQYK+VWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  KLQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

Q8DG62 50S ribosomal protein L282.8e-2064Show/hide
Query:  RVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK
        RVC  TGKKAN    +S S+ +TKKLQ VNLQ+K+VWW  GKR+V+LRLSTKA+KT+E+ GL A AK+AG+DL K
Subjt:  RVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK

Arabidopsis top hitse value%identityAlignment
AT2G33450.1 Ribosomal L28 family7.1e-4367.36Show/hide
Query:  MSPVNTSGV---MAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQP-VARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQ
        M+ + T G    M +S+  +   T  + +LGFLTSQLSG++IS   S +  + IS P  P +QP VARR+CPFTGKKAN+ N VSFSNHKTKKLQFVNLQ
Subjt:  MSPVNTSGV---MAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQP-VARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQ

Query:  YKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        YK+VWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRK+
Subjt:  YKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTTCCGTAATGTTAGGAATGTCGCCGGTGAATACTTCCGGCGTCATGGCAGCATCATCAACCAAACTTCACTTCAGAACTAAACCCAATTCCGACCTAGGGTT
TCTCACTTCTCAATTGAGTGGCATCAAAATCTCCTCCAACCACTCCCTCATCTCGCCCTCGCCCATTTCTCCTCCTCTCAGACCTGCGCTTCAACCCGTTGCTCGTAGAG
TCTGTCCCTTTACTGGAAAGAAAGCAAACAAGAAGAACTTGGTTTCTTTCTCCAACCACAAGACCAAGAAGTTGCAGTTTGTAAATCTTCAATACAAGAAGGTTTGGTGG
GAAGCTGGGAAGCGTTATGTCAAACTACGCTTGTCAACAAAGGCATTGAAGACCATTGAGAAAAATGGACTTGATGCTGTGGCTAAGAAGGCAGGAATTGATCTTCGTAA
GGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTTCCGTAATGTTAGGAATGTCGCCGGTGAATACTTCCGGCGTCATGGCAGCATCATCAACCAAACTTCACTTCAGAACTAAACCCAATTCCGACCTAGGGTT
TCTCACTTCTCAATTGAGTGGCATCAAAATCTCCTCCAACCACTCCCTCATCTCGCCCTCGCCCATTTCTCCTCCTCTCAGACCTGCGCTTCAACCCGTTGCTCGTAGAG
TCTGTCCCTTTACTGGAAAGAAAGCAAACAAGAAGAACTTGGTTTCTTTCTCCAACCACAAGACCAAGAAGTTGCAGTTTGTAAATCTTCAATACAAGAAGGTTTGGTGG
GAAGCTGGGAAGCGTTATGTCAAACTACGCTTGTCAACAAAGGCATTGAAGACCATTGAGAAAAATGGACTTGATGCTGTGGCTAAGAAGGCAGGAATTGATCTTCGTAA
GGAATGA
Protein sequenceShow/hide protein sequence
MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSDLGFLTSQLSGIKISSNHSLISPSPISPPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWW
EAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE