; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0021096 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021096
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionC2H2-type domain-containing protein
Genome locationchr7:4594729..4595475
RNA-Seq ExpressionLag0021096
SyntenyLag0021096
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049241.1 hypothetical protein E6C27_scaffold171G004810 [Cucumis melo var. makuwa]1.2e-9274.3Show/hide
Query:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSN
        MA LLQ PLFALFFLT+FSPS + PWNSS F KSG NPS +++L  S E+S RPS R+NTIFGAPCGLCGQVIFGSEALNHHYNYHFLQ+ELASF   SN
Subjt:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSN

Query:  PCSGSSQRPPSWTNYFHGQASASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQ
        PCSG S RPP    +FHGQASASREPQMTLNDYLTM     PPSLRS+SGAA+DMAH LPLHPLLA+PPP PRT+  N +N QQNQA A    QRRQGNQ
Subjt:  PCSGSSQRPPSWTNYFHGQASASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQ

Query:  IRWNDGGGRAAVGRPAAELQPPQDVIDL-NEEHDCSSDGSEGLDLTLSL
        IRWN+G  R   G+PA+E QPPQDVIDL +EE+DCSSDGSEGLDLTLSL
Subjt:  IRWNDGGGRAAVGRPAAELQPPQDVIDL-NEEHDCSSDGSEGLDLTLSL

KAG6582389.1 hypothetical protein SDJN03_22391, partial [Cucurbita argyrosperma subsp. sororia]7.5e-2340.08Show/hide
Query:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQS-----ELASF
        MA LL+AP           PS  FPW SSPFDKS WNPSF+ELL  S +TS RP  RKNTIFGAPCGLCGQ I  SE LNHH     L S      + S 
Subjt:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQS-----ELASF

Query:  GSRSNPCSGSSQRPPSWTNYFHGQASASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQR
          +    +   Q  P W +    +         T ND L +       S + +   AVDMAH LPLHPLLAQPPP   T                     
Subjt:  GSRSNPCSGSSQRPPSWTNYFHGQASASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQR

Query:  RQGNQIRWNDGGGRAAVGRPAAELQPPQDVIDLNEEHDCSSDGSEGLDLTLS
           N+IR   G                      N E++CSS GSE LDLTLS
Subjt:  RQGNQIRWNDGGGRAAVGRPAAELQPPQDVIDLNEEHDCSSDGSEGLDLTLS

KAG6597359.1 hypothetical protein SDJN03_10539, partial [Cucurbita argyrosperma subsp. sororia]1.2e-9274.7Show/hide
Query:  LLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSNPC
        L L   L  LFFLTAFSPSLAFPW+SSP++KSGWNPS EELL ASGETS RP RRK+TIFGAPCGLCGQVIFGSEALNHHYNYHFLQ++LAS+GSR  P 
Subjt:  LLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSNPC

Query:  SGSSQRPPSWTNYFHGQASASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQIR
        S SSQRPP WT+YFHGQASASREPQ+TLN+ LTMPPPRQP SLRSY    VDMAHLLPLHPLLAQPPPP R T ANG+    N+ AA   GQR QGNQ +
Subjt:  SGSSQRPPSWTNYFHGQASASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQIR

Query:  WNDGGGRAAVGRPAAE-LQPPQDVIDLN--EEHDCSSDGSEGLDLTLSL
         N+GG R    R AAE  QP Q+VIDLN  EE+DCSSDGS+GLDLTLSL
Subjt:  WNDGGGRAAVGRPAAE-LQPPQDVIDLN--EEHDCSSDGSEGLDLTLSL

KGN56847.1 hypothetical protein Csa_010766 [Cucumis sativus]1.4e-9876.71Show/hide
Query:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSN
        M  LLQ PLFALFFLT+FSPSL+FP NSS F +S  NPS   +L  S E+SGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQ+ELASF   SN
Subjt:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSN

Query:  PCSGSSQRPPSWTNYFHGQASASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQ
        P SG SQRPP W+NYFHGQASASREPQMTLNDYLTM     PPSLRSYSGAA+DMAH LPLHPLLAQPPP PRT+ AN +N QQNQA A   G RRQGNQ
Subjt:  PCSGSSQRPPSWTNYFHGQASASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQ

Query:  IRWNDGGGRAAVGRPAAELQPPQDVIDLN-EEHDCSSDGSEGLDLTLSL
        ++WN+GG R   G+PA+E QPPQDVIDLN EE+DCSSD SEGLDLTLSL
Subjt:  IRWNDGGGRAAVGRPAAELQPPQDVIDLN-EEHDCSSDGSEGLDLTLSL

TrEMBL top hitse value%identityAlignment
A0A0A0L892 C2H2-type domain-containing protein6.9e-9976.71Show/hide
Query:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSN
        M  LLQ PLFALFFLT+FSPSL+FP NSS F +S  NPS   +L  S E+SGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQ+ELASF   SN
Subjt:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSN

Query:  PCSGSSQRPPSWTNYFHGQASASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQ
        P SG SQRPP W+NYFHGQASASREPQMTLNDYLTM     PPSLRSYSGAA+DMAH LPLHPLLAQPPP PRT+ AN +N QQNQA A   G RRQGNQ
Subjt:  PCSGSSQRPPSWTNYFHGQASASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQ

Query:  IRWNDGGGRAAVGRPAAELQPPQDVIDLN-EEHDCSSDGSEGLDLTLSL
        ++WN+GG R   G+PA+E QPPQDVIDLN EE+DCSSD SEGLDLTLSL
Subjt:  IRWNDGGGRAAVGRPAAELQPPQDVIDLN-EEHDCSSDGSEGLDLTLSL

A0A5A7U6I9 C2H2-type domain-containing protein5.7e-9374.3Show/hide
Query:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSN
        MA LLQ PLFALFFLT+FSPS + PWNSS F KSG NPS +++L  S E+S RPS R+NTIFGAPCGLCGQVIFGSEALNHHYNYHFLQ+ELASF   SN
Subjt:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSN

Query:  PCSGSSQRPPSWTNYFHGQASASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQ
        PCSG S RPP    +FHGQASASREPQMTLNDYLTM     PPSLRS+SGAA+DMAH LPLHPLLA+PPP PRT+  N +N QQNQA A    QRRQGNQ
Subjt:  PCSGSSQRPPSWTNYFHGQASASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQ

Query:  IRWNDGGGRAAVGRPAAELQPPQDVIDL-NEEHDCSSDGSEGLDLTLSL
        IRWN+G  R   G+PA+E QPPQDVIDL +EE+DCSSDGSEGLDLTLSL
Subjt:  IRWNDGGGRAAVGRPAAELQPPQDVIDL-NEEHDCSSDGSEGLDLTLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTCCTTCTTCAAGCTCCTCTGTTTGCTCTGTTTTTCCTCACAGCCTTCTCTCCTTCTCTGGCTTTCCCTTGGAATTCCTCCCCCTTTGATAAATCTGGCTGGAA
CCCATCATTCGAGGAGCTGTTGCTGGCCTCCGGCGAGACTTCCGGCCGGCCGTCTCGCCGGAAAAATACAATCTTTGGAGCCCCTTGTGGGCTCTGTGGCCAAGTGATTT
TTGGCTCTGAAGCTCTCAATCACCATTACAATTACCATTTCTTGCAGAGTGAGCTTGCTTCTTTTGGGAGCCGTTCAAACCCTTGTTCCGGCAGCTCTCAGCGGCCGCCG
TCGTGGACCAATTACTTCCATGGCCAAGCCTCTGCTTCTCGAGAACCCCAAATGACCCTTAACGATTATTTGACGATGCCACCGCCGCGCCAGCCGCCGTCTCTGAGAAG
CTACTCCGGAGCCGCCGTCGACATGGCCCACCTTCTGCCGCTTCATCCGTTGTTGGCTCAACCGCCGCCGCCGCCGCGGACCACTGTTGCCAACGGTATTAACGTTCAAC
AGAATCAGGCTGCAGCAGGGCAGTTGGGGCAGAGGAGGCAGGGGAACCAAATTCGATGGAATGACGGCGGTGGGAGGGCAGCCGTTGGCCGGCCGGCGGCGGAGCTGCAG
CCACCGCAAGATGTGATTGATCTCAATGAGGAGCATGATTGTAGCTCTGATGGTTCAGAAGGCTTGGACTTGACATTGAGTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTCCTTCTTCAAGCTCCTCTGTTTGCTCTGTTTTTCCTCACAGCCTTCTCTCCTTCTCTGGCTTTCCCTTGGAATTCCTCCCCCTTTGATAAATCTGGCTGGAA
CCCATCATTCGAGGAGCTGTTGCTGGCCTCCGGCGAGACTTCCGGCCGGCCGTCTCGCCGGAAAAATACAATCTTTGGAGCCCCTTGTGGGCTCTGTGGCCAAGTGATTT
TTGGCTCTGAAGCTCTCAATCACCATTACAATTACCATTTCTTGCAGAGTGAGCTTGCTTCTTTTGGGAGCCGTTCAAACCCTTGTTCCGGCAGCTCTCAGCGGCCGCCG
TCGTGGACCAATTACTTCCATGGCCAAGCCTCTGCTTCTCGAGAACCCCAAATGACCCTTAACGATTATTTGACGATGCCACCGCCGCGCCAGCCGCCGTCTCTGAGAAG
CTACTCCGGAGCCGCCGTCGACATGGCCCACCTTCTGCCGCTTCATCCGTTGTTGGCTCAACCGCCGCCGCCGCCGCGGACCACTGTTGCCAACGGTATTAACGTTCAAC
AGAATCAGGCTGCAGCAGGGCAGTTGGGGCAGAGGAGGCAGGGGAACCAAATTCGATGGAATGACGGCGGTGGGAGGGCAGCCGTTGGCCGGCCGGCGGCGGAGCTGCAG
CCACCGCAAGATGTGATTGATCTCAATGAGGAGCATGATTGTAGCTCTGATGGTTCAGAAGGCTTGGACTTGACATTGAGTCTCTAA
Protein sequenceShow/hide protein sequence
MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSNPCSGSSQRPP
SWTNYFHGQASASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQIRWNDGGGRAAVGRPAAELQ
PPQDVIDLNEEHDCSSDGSEGLDLTLSL