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Lag0021162 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021162
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr7:5175217..5183946
RNA-Seq ExpressionLag0021162
SyntenyLag0021162
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH00303.1 Ribonuclease H-like superfamily protein [Prunus dulcis]5.6e-0837.01Show/hide
Query:  WTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPHTPDLL
        W+ PP G +KLN D +W+  TG  GVGW +R+  G  + AG        S L  EA A++E L   L L  D    + VESDSL L+K+LN         
Subjt:  WTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPHTPDLL

Query:  ETMLLVDDIVDLARVMGKTLDIDLHCI
              +D+VDL  + G  +  D+HC+
Subjt:  ETMLLVDDIVDLARVMGKTLDIDLHCI

CAB4273082.1 unnamed protein product [Prunus armeniaca]8.6e-0930.83Show/hide
Query:  QNLDRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPH
        + +  W  PP G LK+N DA+W++ T   GVGW +R+S+G +V AG K      S L +EA AI+E L+  +   +  +  + VESDSL +++++  + +
Subjt:  QNLDRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPH

Query:  TPDLLETMLLVDDIVDLARVMGKTLDIDLHCIY
            ++T+     + D+ +++G+      HC++
Subjt:  TPDLLETMLLVDDIVDLARVMGKTLDIDLHCIY

CAB4279811.1 unnamed protein product [Prunus armeniaca]3.6e-0736.7Show/hide
Query:  QNLDRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPH
        + +  W   P G LK+N DA+W++ T   GVGW +R+S G +V AG K      S L +EA AI+E L   L   +  +  + VESDSL L+++L  + +
Subjt:  QNLDRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPH

Query:  TPDLLETML
            +ET++
Subjt:  TPDLLETML

XP_019190496.1 PREDICTED: uncharacterized protein LOC109184955 [Ipomoea nil]2.8e-0734.45Show/hide
Query:  DRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPHTPD
        +RW+ P  G LKLNTDA+  N + S G+GW +RN EG  +   +  + +N+++   EAL+++E L   L +    M  + VE DS  +  +L++   +  
Subjt:  DRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPHTPD

Query:  LLETMLLVDDIVDLARVMG
             LLVDD+ +LA  +G
Subjt:  LLETMLLVDDIVDLARVMG

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]5.0e-0938.94Show/hide
Query:  RWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPHTPDL
        +W  PP     LN DASW + T   G+GW IR+ +G +VLAG++F+    ++  LEA AI EGL    NL   ++ P+ +E+DS  +  LLN +    DL
Subjt:  RWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPHTPDL

Query:  LETMLLVDDIVDL
         +T  +V++I++L
Subjt:  LETMLLVDDIVDL

TrEMBL top hitse value%identityAlignment
A0A4Y1R838 Ribonuclease H-like superfamily protein2.7e-0837.01Show/hide
Query:  WTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPHTPDLL
        W+ PP G +KLN D +W+  TG  GVGW +R+  G  + AG        S L  EA A++E L   L L  D    + VESDSL L+K+LN         
Subjt:  WTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPHTPDLL

Query:  ETMLLVDDIVDLARVMGKTLDIDLHCI
              +D+VDL  + G  +  D+HC+
Subjt:  ETMLLVDDIVDLARVMGKTLDIDLHCI

A0A6J1DNV9 uncharacterized protein LOC1110224032.4e-0938.94Show/hide
Query:  RWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPHTPDL
        +W  PP     LN DASW + T   G+GW IR+ +G +VLAG++F+    ++  LEA AI EGL    NL   ++ P+ +E+DS  +  LLN +    DL
Subjt:  RWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPHTPDL

Query:  LETMLLVDDIVDL
         +T  +V++I++L
Subjt:  LETMLLVDDIVDL

A0A6J1DSV1 uncharacterized protein LOC1110236081.7e-0736.52Show/hide
Query:  RWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLN-----LFKDLMPPIVVESDSLPLVKLLNNQP
        RW  P   S KLNTDA+W   T + G+GW +R+ +G ++ A  + IR   +I +LE +AI EGL          + ++   PI +ESDSL  + LL+ Q 
Subjt:  RWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLN-----LFKDLMPPIVVESDSLPLVKLLNNQP

Query:  HTPDLLETMLLVDDI
           D  E + L+++I
Subjt:  HTPDLLETMLLVDDI

A0A6J5UAY2 Reverse transcriptase domain-containing protein4.2e-0930.83Show/hide
Query:  QNLDRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPH
        + +  W  PP G LK+N DA+W++ T   GVGW +R+S+G +V AG K      S L +EA AI+E L+  +   +  +  + VESDSL +++++  + +
Subjt:  QNLDRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPH

Query:  TPDLLETMLLVDDIVDLARVMGKTLDIDLHCIY
            ++T+     + D+ +++G+      HC++
Subjt:  TPDLLETMLLVDDIVDLARVMGKTLDIDLHCIY

A0A6J5UV01 Reverse transcriptase domain-containing protein1.7e-0736.7Show/hide
Query:  QNLDRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPH
        + +  W   P G LK+N DA+W++ T   GVGW +R+S G +V AG K      S L +EA AI+E L   L   +  +  + VESDSL L+++L  + +
Subjt:  QNLDRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPH

Query:  TPDLLETML
            +ET++
Subjt:  TPDLLETML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27870.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.2e-0431.58Show/hide
Query:  NLDRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLN
        N DRW  P  G +K N D S++N       GW +R+S GS +LAG    R   + L  E  A+   +I   + +      +  E D+  L  L+N
Subjt:  NLDRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLN

AT2G02650.1 Ribonuclease H-like superfamily protein1.4e-0430.3Show/hide
Query:  NHQNLDRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNN
        + ++  +W  PP G +K N D+ +   +     GWTIR   G +VL G+  ++++   L  EAL     L     ++   +  +  ESDS  LV L+NN
Subjt:  NHQNLDRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNN

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.0e-0730.97Show/hide
Query:  KISSGENHQNLD-RWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPL
        K S  +  +NL  +W  PP   +K NTDA+W       G+GW +RN  G ++  G++ +    ++L  E  A++  +   L + +     I+ ESD+  L
Subjt:  KISSGENHQNLD-RWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPL

Query:  VKLLNNQPHTPDL
        V LLN+    P L
Subjt:  VKLLNNQPHTPDL

AT4G29090.1 Ribonuclease H-like superfamily protein3.1e-0929.5Show/hide
Query:  GSVPKISSGENHQNLDRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDS
        G+ P++    N  +  RW  PP   +K NTDA+W       G+GW +RN +G +   G++ +    S+L  E  A++  +   L+L +     ++ ESDS
Subjt:  GSVPKISSGENHQNLDRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDS

Query:  LPLVKLLNNQPHTPDLLETMLLVDDIVDLARVMGKTLDI
          L+++LNN    P L  T      I DL R++ +  ++
Subjt:  LPLVKLLNNQPHTPDLLETMLLVDDIVDLARVMGKTLDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGAGATAGGCAATCCGGAGGAAAAACCAAAACCCCGATCAAATTAAAACCCTACAGGGAGAAAAAGAATCCGGGGAAAAGAAAAATTGGAAATGGGCGATATTC
GATAGGACATCGTGCAGATCAACTGAGCATACAAACCTTGAAGGAGTGGCAGAGGTGCGAGAAAGGGCAATGGAAGCTGAGAGTGTCTGGTGGAAGAGAAAGAGAGAAAG
GGAAGAAGACAGAGATGAAAAGAGAAAGAGAAAGAAATAGAAAGAGGGAAGGAGGGTTTCCAAACGTTCGGAGGCGATCCAGGGATGAATCACGCAGAATCAAAGCACCT
CGAACCAAACGGAGACGAAAGACCTCGGCCTCGATCTCGGCCCAAGGCCGAGGCCAAGCATGGGTCGGGCTAAGGCCCGGTCCCTCCGACCTTGGCCCGACCTTTTGTCC
CGTTTCGCCTCCGAAATCCATTTTTCAGTCACGTTTCTTAGCTCGTGTTGGGTTGTCCTCGTCGGCTTCTTTGGGCCACATTGATCCAACTACCAAAAAGAAATTGTATA
TTCCAATTATCAAGATACTCAGTACTCGAACTAATAGTGATGCCATGGGTTTAGAGGAGCACCTGAGATATCCTGGTTCAGTTCCTAAAATCAGCAGCGGGGAGAACCAC
CAGAATCTTGATCGTTGGACTTGCCCTCCTTGTGGTTCGCTGAAGCTTAACACAGACGCCTCCTGGATCAATCTGACTGGTTCGAGGGGAGTGGGATGGACAATTCGAAA
CTCTGAGGGATCTTTGGTGCTTGCTGGCTCCAAATTCATCAGGAACAACTGGTCAATTTTGTGGCTTGAAGCTCTGGCGATTAAGGAAGGTTTGATCAAGTACCTTAATC
TCTTCAAGGATCTTATGCCTCCTATTGTGGTTGAATCCGACTCTCTGCCGTTGGTGAAGCTCCTCAACAATCAGCCTCATACCCCAGACCTCTTAGAAACCATGTTGTTG
GTGGACGATATTGTCGATCTTGCGAGAGTGATGGGGAAGACACTCGACATCGATTTACACTGTATTTACACAGAGAACATTCAGGAGCTTGAAGAGGTTGTGTCGACATT
CAAGGTTTCAGTCGAGTTGCAATCAAATCTTGTCTTGTTCTCCTCCATTAAAGAAGCCCTAATTCAAGGAATTTCCAAGGGATTGGTGGCTTGGTTATGTTGTTGGAGAA
CGGGCTGGAATTCAAATACGGCCCATTTAGTTGGCCCAGAAGCAGAAGAAAGAGAAGTGGAATTGGAGGGAAGCAGAACTTCAAACTGGGGAACCGCGCCTTTCCCATTT
CCACTTCCATTTCCAGTTCCAGTTTCTCCATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCGGAGATAGGCAATCCGGAGGAAAAACCAAAACCCCGATCAAATTAAAACCCTACAGGGAGAAAAAGAATCCGGGGAAAAGAAAAATTGGAAATGGGCGATATTC
GATAGGACATCGTGCAGATCAACTGAGCATACAAACCTTGAAGGAGTGGCAGAGGTGCGAGAAAGGGCAATGGAAGCTGAGAGTGTCTGGTGGAAGAGAAAGAGAGAAAG
GGAAGAAGACAGAGATGAAAAGAGAAAGAGAAAGAAATAGAAAGAGGGAAGGAGGGTTTCCAAACGTTCGGAGGCGATCCAGGGATGAATCACGCAGAATCAAAGCACCT
CGAACCAAACGGAGACGAAAGACCTCGGCCTCGATCTCGGCCCAAGGCCGAGGCCAAGCATGGGTCGGGCTAAGGCCCGGTCCCTCCGACCTTGGCCCGACCTTTTGTCC
CGTTTCGCCTCCGAAATCCATTTTTCAGTCACGTTTCTTAGCTCGTGTTGGGTTGTCCTCGTCGGCTTCTTTGGGCCACATTGATCCAACTACCAAAAAGAAATTGTATA
TTCCAATTATCAAGATACTCAGTACTCGAACTAATAGTGATGCCATGGGTTTAGAGGAGCACCTGAGATATCCTGGTTCAGTTCCTAAAATCAGCAGCGGGGAGAACCAC
CAGAATCTTGATCGTTGGACTTGCCCTCCTTGTGGTTCGCTGAAGCTTAACACAGACGCCTCCTGGATCAATCTGACTGGTTCGAGGGGAGTGGGATGGACAATTCGAAA
CTCTGAGGGATCTTTGGTGCTTGCTGGCTCCAAATTCATCAGGAACAACTGGTCAATTTTGTGGCTTGAAGCTCTGGCGATTAAGGAAGGTTTGATCAAGTACCTTAATC
TCTTCAAGGATCTTATGCCTCCTATTGTGGTTGAATCCGACTCTCTGCCGTTGGTGAAGCTCCTCAACAATCAGCCTCATACCCCAGACCTCTTAGAAACCATGTTGTTG
GTGGACGATATTGTCGATCTTGCGAGAGTGATGGGGAAGACACTCGACATCGATTTACACTGTATTTACACAGAGAACATTCAGGAGCTTGAAGAGGTTGTGTCGACATT
CAAGGTTTCAGTCGAGTTGCAATCAAATCTTGTCTTGTTCTCCTCCATTAAAGAAGCCCTAATTCAAGGAATTTCCAAGGGATTGGTGGCTTGGTTATGTTGTTGGAGAA
CGGGCTGGAATTCAAATACGGCCCATTTAGTTGGCCCAGAAGCAGAAGAAAGAGAAGTGGAATTGGAGGGAAGCAGAACTTCAAACTGGGGAACCGCGCCTTTCCCATTT
CCACTTCCATTTCCAGTTCCAGTTTCTCCATCTTAG
Protein sequenceShow/hide protein sequence
MIGDRQSGGKTKTPIKLKPYREKKNPGKRKIGNGRYSIGHRADQLSIQTLKEWQRCEKGQWKLRVSGGREREKGKKTEMKRERERNRKREGGFPNVRRRSRDESRRIKAP
RTKRRRKTSASISAQGRGQAWVGLRPGPSDLGPTFCPVSPPKSIFQSRFLARVGLSSSASLGHIDPTTKKKLYIPIIKILSTRTNSDAMGLEEHLRYPGSVPKISSGENH
QNLDRWTCPPCGSLKLNTDASWINLTGSRGVGWTIRNSEGSLVLAGSKFIRNNWSILWLEALAIKEGLIKYLNLFKDLMPPIVVESDSLPLVKLLNNQPHTPDLLETMLL
VDDIVDLARVMGKTLDIDLHCIYTENIQELEEVVSTFKVSVELQSNLVLFSSIKEALIQGISKGLVAWLCCWRTGWNSNTAHLVGPEAEEREVELEGSRTSNWGTAPFPF
PLPFPVPVSPS