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Lag0021193 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021193
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionphotosynthetic NDH subunit of subcomplex B 5, chloroplastic
Genome locationchr7:5433269..5433902
RNA-Seq ExpressionLag0021193
SyntenyLag0021193
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR034569 - Photosynthetic NDH subunit of subcomplex B 5, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597401.1 Photosynthetic NDH subunit of subcomplex B 5, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.3e-4387.74Show/hide
Query:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY
        MALCSSLPVLSF+PLPKIIFKSS I+ATAFSN+  PG NGI A+KLLGK +R SRLRRLNAAGLSEIEPDLNEDPV+RWETNSVSAEDFEYGVYDGHHTY
Subjt:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY

Query:  FEGEKK
        FEGEKK
Subjt:  FEGEKK

KAG7028861.1 Photosynthetic NDH subunit of subcomplex B 5, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-4488.68Show/hide
Query:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY
        MALCSSLPVLSF+PLPKIIFKSSEI+ATAFSN+  PG NGI A+KLLGK +R SRLRRLNAAGLSEIEPDLNEDPV+RWETNSVSAEDFEYGVYDGHHTY
Subjt:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY

Query:  FEGEKK
        FEGEKK
Subjt:  FEGEKK

XP_022948649.1 photosynthetic NDH subunit of subcomplex B 5, chloroplastic [Cucurbita moschata]4.0e-4387.74Show/hide
Query:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY
        MALCSSLPVLSF+PLPKIIFKSS I ATAFSN+  PG NGI A+KLLGK +R SRLRRLNAAGLSEIEPDLNEDPV+RWETNSVSAEDFEYGVYDGHHTY
Subjt:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY

Query:  FEGEKK
        FEGEKK
Subjt:  FEGEKK

XP_022974431.1 photosynthetic NDH subunit of subcomplex B 5, chloroplastic isoform X1 [Cucurbita maxima]2.3e-4387.74Show/hide
Query:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY
        MALCSSLPVLSF+PLPKIIFKSS I+ATAFSN+  PG NGI A+KLLGK +R SRLRRLNAAGLSEIEPDLNEDPV+RWETNSVSAEDFEYGVYDGHHTY
Subjt:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY

Query:  FEGEKK
        FEGEKK
Subjt:  FEGEKK

XP_038878594.1 photosynthetic NDH subunit of subcomplex B 5, chloroplastic [Benincasa hispida]5.4e-4084.91Show/hide
Query:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY
        MA CSSLPVLSF+P+PKIIFKSSEI+ATAFSNQ  P  NGI ASKLLG L+RRS  RRLNAAGLSEIE DLNEDPV+RWETNSVS EDFEYGVYDGHHTY
Subjt:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY

Query:  FEGEKK
        FEGEKK
Subjt:  FEGEKK

TrEMBL top hitse value%identityAlignment
A0A0A0L8H7 Uncharacterized protein4.9e-3982.24Show/hide
Query:  MALCSSLPVLSFDPLPKIIFKSSE-ITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHT
        MALCSSLPVLSF+P+PKIIFKSSE I+AT FS ++  G NGI +SKLLGKL+RRS   RLNAAGLSEIEPDLNEDPV+RWETNSVS EDFEYGVYDGHHT
Subjt:  MALCSSLPVLSFDPLPKIIFKSSE-ITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHT

Query:  YFEGEKK
        YFEGEKK
Subjt:  YFEGEKK

A0A1S4DSG6 photosynthetic NDH subunit of subcomplex B 5, chloroplastic isoform X17.1e-3881.13Show/hide
Query:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY
        MA  SSLPVLSF+P+PKIIF SSEI A  FS Q   G NGI +SKLLGKL+RRS  RRLNAAGLSEIEPDLNEDPV+RWETNSVS EDFEYGVYDGHHTY
Subjt:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY

Query:  FEGEKK
        FEGEKK
Subjt:  FEGEKK

A0A5A7U0K2 Photosynthetic NDH subunit of subcomplex B 55.4e-3881.13Show/hide
Query:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY
        MA  SSLPVLSF+P+PKIIF SSEI A  FS Q   G NGI +SKLLGKL+RRS  RRLNAAGLSEIEPDLNEDPV+RWETNSVS EDFEYGVYDGHHTY
Subjt:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY

Query:  FEGEKK
        FEGEKK
Subjt:  FEGEKK

A0A6J1GAI7 photosynthetic NDH subunit of subcomplex B 5, chloroplastic1.9e-4387.74Show/hide
Query:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY
        MALCSSLPVLSF+PLPKIIFKSS I ATAFSN+  PG NGI A+KLLGK +R SRLRRLNAAGLSEIEPDLNEDPV+RWETNSVSAEDFEYGVYDGHHTY
Subjt:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY

Query:  FEGEKK
        FEGEKK
Subjt:  FEGEKK

A0A6J1IBC3 photosynthetic NDH subunit of subcomplex B 5, chloroplastic isoform X11.1e-4387.74Show/hide
Query:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY
        MALCSSLPVLSF+PLPKIIFKSS I+ATAFSN+  PG NGI A+KLLGK +R SRLRRLNAAGLSEIEPDLNEDPV+RWETNSVSAEDFEYGVYDGHHTY
Subjt:  MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTY

Query:  FEGEKK
        FEGEKK
Subjt:  FEGEKK

SwissProt top hitse value%identityAlignment
Q9FG89 Photosynthetic NDH subunit of subcomplex B 5, chloroplastic1.8e-1463.79Show/hide
Query:  GKLSRRSRLRRL-NAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTYFEGE
        GK  RR +L +L +AAGLS+IEPD+NEDP+ ++ETNS+  EDF+YG YDG HTY+EGE
Subjt:  GKLSRRSRLRRL-NAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTYFEGE

Arabidopsis top hitse value%identityAlignment
AT5G43750.1 NAD(P)H dehydrogenase 181.3e-1563.79Show/hide
Query:  GKLSRRSRLRRL-NAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTYFEGE
        GK  RR +L +L +AAGLS+IEPD+NEDP+ ++ETNS+  EDF+YG YDG HTY+EGE
Subjt:  GKLSRRSRLRRL-NAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTYFEGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTCTGTTCTTCCCTCCCCGTTCTATCTTTCGATCCACTCCCCAAAATCATCTTCAAATCTTCTGAAATTACGGCTACAGCGTTCTCGAATCAAAGAAATCCGGG
ATTCAATGGAATCCTCGCCTCCAAGTTGCTCGGAAAATTGTCGAGGAGAAGCCGCTTGCGGCGGCTGAATGCGGCCGGATTGTCCGAGATTGAACCCGACTTAAACGAAG
ACCCTGTGAATCGTTGGGAAACCAACAGTGTCAGCGCTGAAGATTTTGAGTATGGAGTATACGATGGGCATCACACTTACTTCGAAGGGGAGAAAAAGGAAGAACTTGGT
ATCACAGTTGAGCCAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTCTGTTCTTCCCTCCCCGTTCTATCTTTCGATCCACTCCCCAAAATCATCTTCAAATCTTCTGAAATTACGGCTACAGCGTTCTCGAATCAAAGAAATCCGGG
ATTCAATGGAATCCTCGCCTCCAAGTTGCTCGGAAAATTGTCGAGGAGAAGCCGCTTGCGGCGGCTGAATGCGGCCGGATTGTCCGAGATTGAACCCGACTTAAACGAAG
ACCCTGTGAATCGTTGGGAAACCAACAGTGTCAGCGCTGAAGATTTTGAGTATGGAGTATACGATGGGCATCACACTTACTTCGAAGGGGAGAAAAAGGAAGAACTTGGT
ATCACAGTTGAGCCAAGGTGA
Protein sequenceShow/hide protein sequence
MALCSSLPVLSFDPLPKIIFKSSEITATAFSNQRNPGFNGILASKLLGKLSRRSRLRRLNAAGLSEIEPDLNEDPVNRWETNSVSAEDFEYGVYDGHHTYFEGEKKEELG
ITVEPR