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Lag0021194 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021194
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:5434554..5434862
RNA-Seq ExpressionLag0021194
SyntenyLag0021194
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019150981.1 PREDICTED: uncharacterized protein LOC109147777 [Ipomoea nil]1.9e-1751.16Show/hide
Query:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFV
        ++ ++LGR GW  LKLDM+KAYDR+E  F+E++L+ +GF  KWV L+M C R  R+ +L+NG P   IIP RGLRQG    P+ F+
Subjt:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFV

XP_021815358.1 uncharacterized protein LOC110757915 [Prunus avium]1.9e-1752.33Show/hide
Query:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFV
        ++S+R G+KG+  LKLDMSKAYDRIE  FLE+++ K+GF  +WV L+M C     +S L+NG P G + P RGLRQG L  P+ F+
Subjt:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFV

XP_023909336.1 uncharacterized protein LOC112020997 [Quercus suber]1.5e-1754.65Show/hide
Query:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFV
        +K++R G+ G+  LKLDMSKAYDR+E  FLE L+ K+GF  KW+DL+  C     FSIL+NG P G I PQRGLRQG    P+ F+
Subjt:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFV

XP_030969743.1 uncharacterized protein LOC115990020 [Quercus lobata]1.9e-1750.98Show/hide
Query:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFVQKLYLLYFHEGLNK
        MK+   G+ G+  LKLDMSKAYDR+E  FLEK+L+K+GF   WV L+M+C     +SIL+NG P G I P RGLRQG    P+ F      L+  EGLN 
Subjt:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFVQKLYLLYFHEGLNK

Query:  EF
         F
Subjt:  EF

XP_030970624.1 uncharacterized protein LOC115991006 [Quercus lobata]1.8e-1853.92Show/hide
Query:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFVQKLYLLYFHEGLNK
        MK+   GRKG+  LKLDMSKAYDR+E  FLEK+L+K+GF   WV L+M+C     +SIL+NG P G I P RGLRQG    PF F      L+  EGLN 
Subjt:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFVQKLYLLYFHEGLNK

Query:  EF
         F
Subjt:  EF

TrEMBL top hitse value%identityAlignment
A0A2N9FT83 Reverse transcriptase domain-containing protein1.1e-1851.52Show/hide
Query:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFVQKLYLLYFHEGLN
        M +QR G+ G  TLKLDMSKAYDR+E  FL +++IK+GFH +WV L+M+C     +S+L+NG P G+I P RGLRQG    P+ F      L   EGLN
Subjt:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFVQKLYLLYFHEGLN

A0A2N9GAI8 Uncharacterized protein6.5e-1949.49Show/hide
Query:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFVQKLYLLYFHEGLN
        M ++R+G+ G+  LKLDMSKAYDR+E GFL++L++++GFH +W+ L+M+C     +SIL+NG P G+I   RGLRQG L  P+ F      L   EGLN
Subjt:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFVQKLYLLYFHEGLN

A0A2N9IP69 Reverse transcriptase domain-containing protein8.5e-1951.52Show/hide
Query:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFVQKLYLLYFHEGLN
        M +QR G+ G   LKLDMSKAYDR+E  FL+++++K+GFH  WV L+M+C     +S+L+NG P GNIIP RGLRQG    P+ F      L   EGLN
Subjt:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFVQKLYLLYFHEGLN

A0A5B7BN08 Reverse transcriptase domain-containing protein1.4e-1853.49Show/hide
Query:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFV
        +K++R G+ G + LKLDMSKAYDR+E  FLE +++++GFH KWVDL+M C     FS+L+NG P G I P RGLRQG    P+ F+
Subjt:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFV

A0A7N2LT95 Reverse transcriptase domain-containing protein8.5e-1953.92Show/hide
Query:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFVQKLYLLYFHEGLNK
        MK+   GRKG+  LKLDMSKAYDR+E  FLEK+L+K+GF   WV L+M+C     +SIL+NG P G I P RGLRQG    PF F      L+  EGLN 
Subjt:  MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFVQKLYLLYFHEGLNK

Query:  EF
         F
Subjt:  EF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G20520.1 RNA binding;RNA-directed DNA polymerases1.8e-0551.22Show/hide
Query:  QRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWV
        ++ G KGW  LKLD+ KAYDRI   +LE  LI  GF   W+
Subjt:  QRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTCAAAGATTAGGCAGAAAGGGTTGGACAACTTTGAAATTAGACATGAGCAAAGCTTATGATCGAATTGAATGTGGCTTTTTGGAGAAGTTGCTTATCAAAAT
TGGCTTCCATATTAAATGGGTGGATTTGGTCATGGACTGTGCCAGAATAGCAAGGTTTTCAATTTTGCTGAATGGTGGCCCAATTGGTAATATTATTCCTCAACGAGGAT
TACGACAGGGGATCCTCTATCTCCCTTTCTACTTTGTTCAGAAGCTTTATCTTCTCTACTTTCATGAGGGATTGAACAAGGAATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTCAAAGATTAGGCAGAAAGGGTTGGACAACTTTGAAATTAGACATGAGCAAAGCTTATGATCGAATTGAATGTGGCTTTTTGGAGAAGTTGCTTATCAAAAT
TGGCTTCCATATTAAATGGGTGGATTTGGTCATGGACTGTGCCAGAATAGCAAGGTTTTCAATTTTGCTGAATGGTGGCCCAATTGGTAATATTATTCCTCAACGAGGAT
TACGACAGGGGATCCTCTATCTCCCTTTCTACTTTGTTCAGAAGCTTTATCTTCTCTACTTTCATGAGGGATTGAACAAGGAATTTTGA
Protein sequenceShow/hide protein sequence
MKSQRLGRKGWTTLKLDMSKAYDRIECGFLEKLLIKIGFHIKWVDLVMDCARIARFSILLNGGPIGNIIPQRGLRQGILYLPFYFVQKLYLLYFHEGLNKEF