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Lag0021195 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021195
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA-directed DNA polymerase (Reverse transcriptase)-related family protein
Genome locationchr7:5434979..5435859
RNA-Seq ExpressionLag0021195
SyntenyLag0021195
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]9.9e-1241.18Show/hide
Query:  VIKQRVWQALQ-----------GRYAFQDSLLTASTKSNSSVFWKGFVWARELIHMGARKRVGNGTSISFFTDPWIPRETSFKPL
        ++ ++VW+ LQ            +Y     +L A+   N S FWKGF+W R+L+  G R RVGNG++I+ F+DPWIPR  SF+P+
Subjt:  VIKQRVWQALQ-----------GRYAFQDSLLTASTKSNSSVFWKGFVWARELIHMGARKRVGNGTSISFFTDPWIPRETSFKPL

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.1e-1734.76Show/hide
Query:  FLPNVSNEFGLVLANILQMAVAQNLGSYLGVPSSFSGRRCD---------------------DFR--------VIKQRVWQALQ-----------GRYAF
        F PNV  E    L  IL + +  + G+YLG+PS F+ RR +                     +FR        ++ + VW+ LQ            +Y  
Subjt:  FLPNVSNEFGLVLANILQMAVAQNLGSYLGVPSSFSGRRCD---------------------DFR--------VIKQRVWQALQ-----------GRYAF

Query:  QDSLLTASTKSNSSVFWKGFVWARELIHMGARKRVGNGTSISFFTDPWIPRETSFKPLALVHSGAPE----HHIVADFFYSITHLGY
          SLL AS  S SS FWKGF+W R+L+  G R RVGNG++I  F+DPW+PR T+FKPL   ++GA +      I AD  + +T + +
Subjt:  QDSLLTASTKSNSSVFWKGFVWARELIHMGARKRVGNGTSISFFTDPWIPRETSFKPLALVHSGAPE----HHIVADFFYSITHLGY

XP_030483444.1 uncharacterized protein LOC115700033 [Cannabis sativa]2.9e-1134.68Show/hide
Query:  LWFFLPNVSNEFGLVLANILQMAVAQNLGSYLGVPSSFSGRRCDDFRVIKQR---VWQALQGRYAFQDSLLTASTKSNSSVFWKGFVWARELIHMGARKR
        L  F PN      +   + L M + + + +YLG+P          +RV+      + Q L+ RY  Q S L A+  S+ S  W+G VW +EL+  G R+R
Subjt:  LWFFLPNVSNEFGLVLANILQMAVAQNLGSYLGVPSSFSGRRCDDFRVIKQR---VWQALQGRYAFQDSLLTASTKSNSSVFWKGFVWARELIHMGARKR

Query:  VGNGTSISFFTDPWIPRETSFKPL
        +GNG +   F DPWIP   SF P+
Subjt:  VGNGTSISFFTDPWIPRETSFKPL

XP_030486804.1 uncharacterized protein LOC115703708 [Cannabis sativa]1.4e-1033.83Show/hide
Query:  LWFFLPNVSNEFGLVLANILQMAVAQNLGSYLGVPSSFSGRRCDDFRVIK-QRVW-----------QALQGRYAFQDSLLTASTKSNSSVFWKGFVWARE
        L  F  N      +   + L M + + +   LG+P      +   FR IK ++ W           Q L+ RY  Q S L A+  S+ S  W+G VW +E
Subjt:  LWFFLPNVSNEFGLVLANILQMAVAQNLGSYLGVPSSFSGRRCDDFRVIK-QRVW-----------QALQGRYAFQDSLLTASTKSNSSVFWKGFVWARE

Query:  LIHMGARKRVGNGTSISFFTDPWIPRETSFKPL
        L+  G R+R+GNG +   F DPWIPR  SF P+
Subjt:  LIHMGARKRVGNGTSISFFTDPWIPRETSFKPL

XP_030505522.1 uncharacterized protein LOC115720515 [Cannabis sativa]5.4e-1047.76Show/hide
Query:  QALQGRYAFQDSLLTASTKSNSSVFWKGFVWARELIHMGARKRVGNGTSISFFTDPWIPRETSFKPL
        Q L+ RY  Q S L A+  S+ S  W+G VW +EL+  G R+R+GNG +   F DPWIPR  SF P+
Subjt:  QALQGRYAFQDSLLTASTKSNSSVFWKGFVWARELIHMGARKRVGNGTSISFFTDPWIPRETSFKPL

TrEMBL top hitse value%identityAlignment
A0A6J1BRN0 uncharacterized protein LOC1110047874.8e-1241.18Show/hide
Query:  VIKQRVWQALQ-----------GRYAFQDSLLTASTKSNSSVFWKGFVWARELIHMGARKRVGNGTSISFFTDPWIPRETSFKPL
        ++ ++VW+ LQ            +Y     +L A+   N S FWKGF+W R+L+  G R RVGNG++I+ F+DPWIPR  SF+P+
Subjt:  VIKQRVWQALQ-----------GRYAFQDSLLTASTKSNSSVFWKGFVWARELIHMGARKRVGNGTSISFFTDPWIPRETSFKPL

A0A6J1DX30 uncharacterized protein LOC1110248749.9e-1834.76Show/hide
Query:  FLPNVSNEFGLVLANILQMAVAQNLGSYLGVPSSFSGRRCD---------------------DFR--------VIKQRVWQALQ-----------GRYAF
        F PNV  E    L  IL + +  + G+YLG+PS F+ RR +                     +FR        ++ + VW+ LQ            +Y  
Subjt:  FLPNVSNEFGLVLANILQMAVAQNLGSYLGVPSSFSGRRCD---------------------DFR--------VIKQRVWQALQ-----------GRYAF

Query:  QDSLLTASTKSNSSVFWKGFVWARELIHMGARKRVGNGTSISFFTDPWIPRETSFKPLALVHSGAPE----HHIVADFFYSITHLGY
          SLL AS  S SS FWKGF+W R+L+  G R RVGNG++I  F+DPW+PR T+FKPL   ++GA +      I AD  + +T + +
Subjt:  QDSLLTASTKSNSSVFWKGFVWARELIHMGARKRVGNGTSISFFTDPWIPRETSFKPLALVHSGAPE----HHIVADFFYSITHLGY

A0A803NKW3 Uncharacterized protein1.0e-0932.12Show/hide
Query:  RAKELITLNL---LWFFLPNVSNE-FGLVLANILQMAVAQNLGSYLGVPSSFSGRRCDDFRVIKQRVWQALQGR----------YAFQD-----SLLTAS
        R K+L+  ++   LW FL +   + F +    +L  AVAQ++ +Y       S    D   V+  + W  L  R          ++ QD     + L A 
Subjt:  RAKELITLNL---LWFFLPNVSNE-FGLVLANILQMAVAQNLGSYLGVPSSFSGRRCDDFRVIKQRVWQALQGR----------YAFQD-----SLLTAS

Query:  TKSNSSVFWKGFVWARELIHMGARKRVGNGTSISFFTDPWIPRETSFKPLALVHSGAPEHHIVAD
        +    S+ W+G VW +EL+  G R +VG+G +IS  TDPWIP  T FKP  L+  G+  +  VAD
Subjt:  TKSNSSVFWKGFVWARELIHMGARKRVGNGTSISFFTDPWIPRETSFKPLALVHSGAPEHHIVAD

A0A803NM27 Uncharacterized protein2.6e-1043.53Show/hide
Query:  VWQALQGRYAFQDSLLTASTKSNSSVFWKGFVWARELIHMGARKRVGNGTSISFFTDPWIPRETSFKPLALVHSGAPEHHIVADF
        +++ L+GRY  +   L+A+T   SS+ W+GF W REL+  G R +VGNG  I+  TDPWIP  + F P  +  +GAP  + VAD+
Subjt:  VWQALQGRYAFQDSLLTASTKSNSSVFWKGFVWARELIHMGARKRVGNGTSISFFTDPWIPRETSFKPLALVHSGAPEHHIVADF

A0A803Q8J4 Uncharacterized protein6.9e-1144.71Show/hide
Query:  VWQALQGRYAFQDSLLTASTKSNSSVFWKGFVWARELIHMGARKRVGNGTSISFFTDPWIPRETSFKPLALVHSGAPEHHIVADF
        +++ L+GRY  ++  L+A+T   SS+ W+G  W REL+  G RK+VGNG SIS   DPWIP    F P  + +SG P + +VAD+
Subjt:  VWQALQGRYAFQDSLLTASTKSNSSVFWKGFVWARELIHMGARKRVGNGTSISFFTDPWIPRETSFKPLALVHSGAPEHHIVADF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCCGCCTCGGGCCAAAGAGTTAATTACTCTAAATCTGTTATGGTTTTTTTTGCCTAATGTGTCCAATGAGTTTGGACTTGTTTTGGCTAATATTCTCCAGATGGC
TGTAGCACAAAATTTGGGATCGTATTTGGGGGTTCCATCTTCCTTTTCAGGCCGAAGATGTGATGATTTTAGAGTAATTAAACAACGCGTGTGGCAAGCTCTTCAAGGTC
GATACGCTTTTCAAGATTCGTTATTGACAGCCTCGACAAAATCCAATAGCTCGGTGTTTTGGAAAGGCTTTGTTTGGGCTCGTGAACTCATTCACATGGGTGCGCGTAAA
CGTGTGGGAAATGGAACCTCGATAAGTTTTTTCACTGACCCGTGGATTCCAAGAGAAACATCTTTCAAACCTTTGGCCCTTGTTCATTCTGGAGCTCCGGAGCATCATAT
AGTGGCTGATTTTTTTTACAGCATCACTCACTTGGGATATGGGGAAACTTCGTCAGGTGGTGTCGGAGGAGGATGCTTTGATTATCCAATCTATTCCGATTGGTGCATCA
ACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCCGCCTCGGGCCAAAGAGTTAATTACTCTAAATCTGTTATGGTTTTTTTTGCCTAATGTGTCCAATGAGTTTGGACTTGTTTTGGCTAATATTCTCCAGATGGC
TGTAGCACAAAATTTGGGATCGTATTTGGGGGTTCCATCTTCCTTTTCAGGCCGAAGATGTGATGATTTTAGAGTAATTAAACAACGCGTGTGGCAAGCTCTTCAAGGTC
GATACGCTTTTCAAGATTCGTTATTGACAGCCTCGACAAAATCCAATAGCTCGGTGTTTTGGAAAGGCTTTGTTTGGGCTCGTGAACTCATTCACATGGGTGCGCGTAAA
CGTGTGGGAAATGGAACCTCGATAAGTTTTTTCACTGACCCGTGGATTCCAAGAGAAACATCTTTCAAACCTTTGGCCCTTGTTCATTCTGGAGCTCCGGAGCATCATAT
AGTGGCTGATTTTTTTTACAGCATCACTCACTTGGGATATGGGGAAACTTCGTCAGGTGGTGTCGGAGGAGGATGCTTTGATTATCCAATCTATTCCGATTGGTGCATCA
ACTGA
Protein sequenceShow/hide protein sequence
MRPPRAKELITLNLLWFFLPNVSNEFGLVLANILQMAVAQNLGSYLGVPSSFSGRRCDDFRVIKQRVWQALQGRYAFQDSLLTASTKSNSSVFWKGFVWARELIHMGARK
RVGNGTSISFFTDPWIPRETSFKPLALVHSGAPEHHIVADFFYSITHLGYGETSSGGVGGGCFDYPIYSDWCIN