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Lag0021264 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021264
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionFerredoxin
Genome locationchr7:5969738..5970178
RNA-Seq ExpressionLag0021264
SyntenyLag0021264
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR001041 - 2Fe-2S ferredoxin-type iron-sulfur binding domain
IPR010241 - Ferredoxin [2Fe-2S], plant
IPR012675 - Beta-grasp domain superfamily
IPR036010 - 2Fe-2S ferredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582296.1 Ferredoxin C 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.0e-6790.48Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQL-ASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVD
        MATLHFVPSAFSLPKQKQPTKLSSVFKLR TTQ+  S+RRL VRSYKVVIEHEGQ TELEVDADESIL +ALD GLDIPHDCKLGVCMTCPARL+SGAVD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQL-ASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVD

Query:  QSEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND
        QSEGMLSDDVVE+GYSLLCVAYPRSDC I+TIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND

XP_022138084.1 uncharacterized protein LOC111009341 [Momordica charantia]3.2e-6689.04Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQLASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQ
        MATLHFVPSAFS  KQKQPTKLSSVFKLRPTTQ+  RRRL VRSYKVVIEHEGQ+TELEV+ DESILS+ALD+GL +PHDCKLGVCMTCPARL+SGAVDQ
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQLASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQ

Query:  SEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND
        SEGMLSDDVVERGY+LLCVAYPRSDC IKTIPEEELLALQLATAND
Subjt:  SEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND

XP_022956084.1 uncharacterized protein LOC111457884 [Cucurbita moschata]3.5e-6891.84Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQL-ASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVD
        MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQL  S+RRL VRSYKVVIEHEGQ TELEVDADESIL +ALD GLDIPHDCKLGVCMTCPARL+SGAVD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQL-ASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVD

Query:  QSEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND
        QSEGMLSDDVVE+GYSLLCVAYPRSDC I+TIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND

XP_022979429.1 uncharacterized protein LOC111479154 [Cucurbita maxima]3.8e-6790.48Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQL-ASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVD
        MATLHFVPSAFSLPKQKQPTKLSSVFKLR TTQ+  S+RRL VRSYKVVIEHEGQ TELEVDADESIL++ALD GLDIPHDCKLGVCMTCPARL+SGAVD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQL-ASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVD

Query:  QSEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND
        QSEGMLSDDVVE+GYSLLCVAYPRSDC I+TIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND

XP_023526556.1 uncharacterized protein LOC111790026 [Cucurbita pepo subsp. pepo]5.9e-6891.16Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQL-ASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVD
        MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQ+  S+RRL VRSYKVVIEHEGQ TELEVDADESIL +ALD GLDIPHDCKLGVCMTCPARL+SGAVD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQL-ASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVD

Query:  QSEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND
        QSEGMLSDDVVE+GYSLLCVAYPRSDC I+TIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND

TrEMBL top hitse value%identityAlignment
A0A0A0L4U6 Ferredoxin4.3e-6488.44Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQLA-SRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVD
        MATLHFVPSAFSLPKQKQP KLSSV   RPTTQ++ SRRRL VRSYKVVIEHEGQ TELEVD DESILS+ALDNGL+IPHDCKLGVCMTCPARL+SG VD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQLA-SRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVD

Query:  QSEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND
        QSEGMLSDDVV +GYSLLCVAYPRSDC IKTIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND

A0A5D3D1U0 Ferredoxin7.3e-6487.76Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQLA-SRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVD
        MATLHFVPSAFSLPKQKQP KLSSV   +PTT ++ SRRRL VRSYKVVIEHEGQ TELEVD DESILS+ALDNGL+IPHDCKLGVCMTCPARL+SG VD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQLA-SRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVD

Query:  QSEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND
        QSEGMLSDDVVE+GYSLLCVAYPRSDC IKTIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND

A0A6J1C929 Ferredoxin1.6e-6689.04Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQLASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQ
        MATLHFVPSAFS  KQKQPTKLSSVFKLRPTTQ+  RRRL VRSYKVVIEHEGQ+TELEV+ DESILS+ALD+GL +PHDCKLGVCMTCPARL+SGAVDQ
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQLASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQ

Query:  SEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND
        SEGMLSDDVVERGY+LLCVAYPRSDC IKTIPEEELLALQLATAND
Subjt:  SEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND

A0A6J1GY17 Ferredoxin1.7e-6891.84Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQL-ASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVD
        MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQL  S+RRL VRSYKVVIEHEGQ TELEVDADESIL +ALD GLDIPHDCKLGVCMTCPARL+SGAVD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQL-ASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVD

Query:  QSEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND
        QSEGMLSDDVVE+GYSLLCVAYPRSDC I+TIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND

A0A6J1IWL8 Ferredoxin1.8e-6790.48Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQL-ASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVD
        MATLHFVPSAFSLPKQKQPTKLSSVFKLR TTQ+  S+RRL VRSYKVVIEHEGQ TELEVDADESIL++ALD GLDIPHDCKLGVCMTCPARL+SGAVD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQL-ASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVD

Query:  QSEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND
        QSEGMLSDDVVE+GYSLLCVAYPRSDC I+TIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND

SwissProt top hitse value%identityAlignment
O23344 Ferredoxin C 1, chloroplastic1.1e-4361.11Show/hide
Query:  SAFSLPKQKQPTKLSSVFKLRPTTQLASRR------RLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQSE
        S  SLPK       S   +    +   +RR      R+  R+YKVV+EH+G+ TELEV+ DE+ILS ALD+GLD+P+DC LGVCMTCPA+L++G VDQS 
Subjt:  SAFSLPKQKQPTKLSSVFKLRPTTQLASRR------RLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQSE

Query:  GMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND
        GMLSDDVVERGY+LLC +YP SDC IK IPEEELL+LQLATAND
Subjt:  GMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND

P00252 Ferredoxin-12.8e-2050Show/hide
Query:  YKV-VIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEEL
        YKV +++ EG  T ++V  DE IL  A D GLD+P+ C+ G C TC  +++SG VDQS +  L DD +E+GY L CVAYP SD +I+T  EE+L
Subjt:  YKV-VIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEEL

P08451 Ferredoxin-22.8e-2046.94Show/hide
Query:  SYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQSEGM-LSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQ
        +Y+V + ++GQ+     D+D+S+L +A   G+D+P  C  GVC TC AR++SG VDQ + M +  +  ++GY+LLCVAYPRSD +I+T  E+EL ALQ
Subjt:  SYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQSEGM-LSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQ

P0A3C9 Ferredoxin-14.8e-2049.47Show/hide
Query:  SYKV-VIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEEL
        +YKV ++  +G  T ++V  DE IL  A + GLD+P  C+ G C TC  +L+ G VDQS +  L DD +E+G+ L CVAYPRSDC+I T  EEEL
Subjt:  SYKV-VIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEEL

P0A3D0 Ferredoxin-14.8e-2049.47Show/hide
Query:  SYKV-VIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEEL
        +YKV ++  +G  T ++V  DE IL  A + GLD+P  C+ G C TC  +L+ G VDQS +  L DD +E+G+ L CVAYPRSDC+I T  EEEL
Subjt:  SYKV-VIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEEL

Arabidopsis top hitse value%identityAlignment
AT1G10960.1 ferredoxin 15.6e-1636.17Show/hide
Query:  VPSAFSLPKQKQPTKL--------SSVFKLRPTTQLASRRRLAVRSYKV-VIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGA
        + S   L +Q+ P  L         S+F L+ +T     R  A+ +YKV  I  EG+  E+E + D  +L  A + GLD+P+ C+ G C +C  +++SG+
Subjt:  VPSAFSLPKQKQPTKL--------SSVFKLRPTTQLASRRRLAVRSYKV-VIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGA

Query:  VDQS-EGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELL
        +DQS +  L D+ +  GY L CVAYP SD  I+T  EE ++
Subjt:  VDQS-EGMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELL

AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein1.6e-1538.79Show/hide
Query:  SVFKLRPTTQLASRRRLAVRSYKV-VIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVERGYSLLCVAY
        S+F L+  T     R  A+ +YKV  I  EG+  E+E D D  +L  A + G+D+P+ C+ G C +C  +++SG+VDQS +  L D+ +  G+ L C AY
Subjt:  SVFKLRPTTQLASRRRLAVRSYKV-VIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVERGYSLLCVAY

Query:  PRSDCRIKTIPEEELL
        P SD  I+T  EE+++
Subjt:  PRSDCRIKTIPEEELL

AT2G27510.1 ferredoxin 31.9e-1948.94Show/hide
Query:  YKV-VIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQSEG-MLSDDVVERGYSLLCVAYPRSDCRIKTIPEEEL
        YKV ++  +GQ  E EV  D+ IL  A + G+D+P+ C+ G C TC  +++SG VDQS+G  L D  +E+GY L CVAYP+SDC I T  E EL
Subjt:  YKV-VIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQSEG-MLSDDVVERGYSLLCVAYPRSDCRIKTIPEEEL

AT4G14890.1 2Fe-2S ferredoxin-like superfamily protein7.5e-4561.11Show/hide
Query:  SAFSLPKQKQPTKLSSVFKLRPTTQLASRR------RLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQSE
        S  SLPK       S   +    +   +RR      R+  R+YKVV+EH+G+ TELEV+ DE+ILS ALD+GLD+P+DC LGVCMTCPA+L++G VDQS 
Subjt:  SAFSLPKQKQPTKLSSVFKLRPTTQLASRR------RLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQSE

Query:  GMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND
        GMLSDDVVERGY+LLC +YP SDC IK IPEEELL+LQLATAND
Subjt:  GMLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND

AT5G10000.1 ferredoxin 44.7e-1540.4Show/hide
Query:  AVRSYKV-VIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQSEG-MLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELL
        A  S KV +I  EG+  E+E + D  IL +A + GL++P+ C+ G C TC  +L+SG VDQS G  L ++ +++GY L C+A P  DC + T  + +L+
Subjt:  AVRSYKV-VIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQSEG-MLSDDVVERGYSLLCVAYPRSDCRIKTIPEEELL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCTTCATTTTGTTCCATCCGCTTTCTCTCTACCAAAACAAAAGCAACCCACCAAGCTTTCCTCAGTCTTCAAGCTCAGACCCACAACCCAGCTAGCCTCACG
GCGGCGCCTGGCGGTCCGGTCTTACAAAGTGGTGATCGAGCACGAGGGCCAGGCCACCGAGCTGGAGGTCGATGCCGACGAGTCCATATTGAGCACTGCACTGGACAATG
GCTTGGACATTCCTCACGATTGCAAGCTTGGAGTGTGCATGACTTGCCCTGCTCGCCTTATCAGCGGCGCCGTCGACCAGAGCGAGGGCATGCTGAGCGATGACGTTGTG
GAGCGTGGCTATTCGCTTCTGTGTGTGGCTTATCCCCGCTCAGACTGCCGCATAAAAACCATCCCCGAGGAGGAATTGTTGGCACTTCAATTAGCCACTGCTAATGACTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTCTTCATTTTGTTCCATCCGCTTTCTCTCTACCAAAACAAAAGCAACCCACCAAGCTTTCCTCAGTCTTCAAGCTCAGACCCACAACCCAGCTAGCCTCACG
GCGGCGCCTGGCGGTCCGGTCTTACAAAGTGGTGATCGAGCACGAGGGCCAGGCCACCGAGCTGGAGGTCGATGCCGACGAGTCCATATTGAGCACTGCACTGGACAATG
GCTTGGACATTCCTCACGATTGCAAGCTTGGAGTGTGCATGACTTGCCCTGCTCGCCTTATCAGCGGCGCCGTCGACCAGAGCGAGGGCATGCTGAGCGATGACGTTGTG
GAGCGTGGCTATTCGCTTCTGTGTGTGGCTTATCCCCGCTCAGACTGCCGCATAAAAACCATCCCCGAGGAGGAATTGTTGGCACTTCAATTAGCCACTGCTAATGACTG
A
Protein sequenceShow/hide protein sequence
MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQLASRRRLAVRSYKVVIEHEGQATELEVDADESILSTALDNGLDIPHDCKLGVCMTCPARLISGAVDQSEGMLSDDVV
ERGYSLLCVAYPRSDCRIKTIPEEELLALQLATAND