CuGenDBv2

Gene ID	Lag0021360
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	BHLH domain-containing protein
Genome location	chr7:6829246..6830491
RNA-Seq Expression	Lag0021360
Synteny	Lag0021360
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain IPR036638 - Helix-loop-helix DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6582238.1 Transcription factor basic helix-loop-helix 95, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-77

86.43

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Query:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME
        MEA TDSV+ L P ILPVH+SE A+  ASTSRKRRR ALEANGGVQ+KGREKRKEMSESF VLQSLVPNLSPKATRE IV+ETI+FIE LQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME

Query:  KKASESVTMLPNTNSDS-SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSLKK
        KK  ESVTMLP+TNSDS  GGVIVSVS NIVLFGII ASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG VE TIEQIRNDILSLKK
Subjt:  KKASESVTMLPNTNSDS-SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSLKK

XP_022955986.1 uncharacterized protein LOC111457820 [Cucurbita moschata]

1.3e-77

86.43

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Query:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME
        MEA TDSV+ L P ILPVH+SE A+  ASTSRKRRR ALEANGGVQ+KGREKRKEMSESF VLQSLVPNLSPKATRE IV+ETI+FIE LQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME

Query:  KKASESVTMLPNTNSDS-SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSLKK
        KK  ESVTMLP+TNSDS  GGVIVSVS NIVLFGII ASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG VE TIEQIRNDILSLKK
Subjt:  KKASESVTMLPNTNSDS-SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSLKK

XP_022979931.1 uncharacterized protein LOC111479473 [Cucurbita maxima]

6.0e-75

82.84

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Query:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME
        MEA TDSV+ L P ILPVH+SE A+  ASTSRKR R ALEANGG Q+KGREKRKEMSESF VLQSLVPNLSPKATRE IV+ETI+FIE LQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME

Query:  KKASESVTMLPNTNSDS------SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDIL
        KK  ESVTMLP+TNSDS       GGVIVSVS NIVLFGII ASVRRGMVT+ILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG VE TIEQIRNDIL
Subjt:  KKASESVTMLPNTNSDS------SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDIL

Query:  SLKK
        SLKK
Subjt:  SLKK

XP_023528352.1 uncharacterized protein LOC111791298 [Cucurbita pepo subsp. pepo]

7.6e-78

85.15

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Query:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME
        MEA TDSV+ L P ILPVH+SE A+  ASTSRKRRR ALEANGGVQ+KGREKRKEMSESF VLQSLVPNLSPKATRE IV+ETI+FIE LQKQLTRLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME

Query:  KKASESVTMLPNTNSDS----SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSL
        KK  ESVTMLP+TNSDS     GGVIVSVS NIVLFGII ASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTAS+HG VE TIEQIRNDILSL
Subjt:  KKASESVTMLPNTNSDS----SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSL

Query:  KK
        KK
Subjt:  KK

XP_038885840.1 transcription factor bHLH95-like [Benincasa hispida]

3.4e-78

85.64

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Query:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME
        MEA TDSV+PLFP ILPVH+SE  +K AS SRKR R ALEANGGVQKK REKRKEMSESF VLQSLVPNLSPKATRE IV+ETI+FIEFLQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME

Query:  KKASESVTMLPNTNSDSS----GGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSL
        KK+SESVTMLP+TNSDSS    GGVIVSVSGNIVLFGIIIASV+RGMVTQILM FERHQAEVLAANVAVSHGNLTLTVTASVHG VE TIE I+NDILSL
Subjt:  KKASESVTMLPNTNSDSS----GGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSL

Query:  KK
        KK
Subjt:  KK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5R7 BHLH domain-containing protein

2.7e-73

79.8

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Query:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME
        MEA +DSVIPLFP ILPVH  E  +K AS SRKR R ALEANGGVQKK +EKRKEMSESF VL+SLVPNLSPKATRE IV+  I+FIEFLQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME

Query:  KKASESVTMLPNTNSDSSG-----GVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILS
        KK+SESV +LPNTNSDSSG     GVIVS+SGNIVLFG+IIASV+RG+VTQIL+ FERH+AEVLAANV VSHGNLTLTVTASVHG VE TIEQIRNDIL 
Subjt:  KKASESVTMLPNTNSDSSG-----GVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILS

Query:  LKK
        LKK
Subjt:  LKK

A0A1S4DSM0 transcription factor bHLH95-like

9.4e-74

79.7

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Query:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME
        MEA +DSV+PLFP ILP+H  E  +K AS SRKR R ALEANGGVQKK +EKRKEMSESF VL+SLVPNLSPKATRE IV+  I+FIEFLQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME

Query:  KKASESVTMLPNTNSDSSG----GVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSL
        KK+SESVT+LPN+NSDSSG    GVIVS+SGNIVLFG+IIASV+RGMVTQIL+ FERH+ EVLAANV VSHGNLTLTVTASVHG VE TIEQIRNDILSL
Subjt:  KKASESVTMLPNTNSDSSG----GVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSL

Query:  KK
        KK
Subjt:  KK

A0A5A7U767 Transcription factor bHLH95-like

9.4e-74

79.7

Show/hide

Query:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME
        MEA +DSV+PLFP ILP+H  E  +K AS SRKR R ALEANGGVQKK +EKRKEMSESF VL+SLVPNLSPKATRE IV+  I+FIEFLQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME

Query:  KKASESVTMLPNTNSDSSG----GVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSL
        KK+SESVT+LPN+NSDSSG    GVIVS+SGNIVLFG+IIASV+RGMVTQIL+ FERH+ EVLAANV VSHGNLTLTVTASVHG VE TIEQIRNDILSL
Subjt:  KKASESVTMLPNTNSDSSG----GVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSL

Query:  KK
        KK
Subjt:  KK

A0A6J1GWN9 uncharacterized protein LOC111457820

6.3e-78

86.43

Show/hide

Query:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME
        MEA TDSV+ L P ILPVH+SE A+  ASTSRKRRR ALEANGGVQ+KGREKRKEMSESF VLQSLVPNLSPKATRE IV+ETI+FIE LQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME

Query:  KKASESVTMLPNTNSDS-SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSLKK
        KK  ESVTMLP+TNSDS  GGVIVSVS NIVLFGII ASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG VE TIEQIRNDILSLKK
Subjt:  KKASESVTMLPNTNSDS-SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSLKK

A0A6J1IS55 uncharacterized protein LOC111479473

2.9e-75

82.84

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Query:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME
        MEA TDSV+ L P ILPVH+SE A+  ASTSRKR R ALEANGG Q+KGREKRKEMSESF VLQSLVPNLSPKATRE IV+ETI+FIE LQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEME

Query:  KKASESVTMLPNTNSDS------SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDIL
        KK  ESVTMLP+TNSDS       GGVIVSVS NIVLFGII ASVRRGMVT+ILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG VE TIEQIRNDIL
Subjt:  KKASESVTMLPNTNSDS------SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDIL

Query:  SLKK
        SLKK
Subjt:  SLKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

3.5e-04

30.93

Show/hide

Query:  LPVHESEVADKNASTSRKRRRPALEANGGVQKK-----------GREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEMEK
        LP H S  + +  +T+ K+ +   + N    ++            RE+RK+M + F  L +L+P L PKA +  IV E +  I+ L++ L +LEM+K
Subjt:  LPVHESEVADKNASTSRKRRRPALEANGGVQKK-----------GREKRKEMSESFYVLQSLVPNLSPKATRENIVTETIEFIEFLQKQLTRLEMEK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTATCTTTCGAGGTGGAAGGTTCAAATCCTTCCAAAGAATAAGGAACAACAAGAAGACGGCGCAAAGAAGATTACCGAGCTTCTATTTGTAGTAATGGAGGCCGGCAC
CGACTCTGTGATTCCACTTTTCCCGCAGATTTTGCCGGTGCATGAATCTGAAGTTGCCGACAAGAATGCTTCGACCTCAAGAAAGCGTCGCAGACCAGCTTTGGAAGCCA
ACGGCGGTGTACAGAAGAAGGGGAGGGAGAAGAGGAAGGAGATGAGTGAGAGTTTCTATGTTCTTCAATCTCTCGTACCGAATCTCTCTCCCAAGGCTACGAGGGAGAAT
ATTGTTACCGAAACGATCGAGTTCATCGAGTTTCTGCAGAAGCAGTTGACGAGGCTGGAAATGGAGAAGAAAGCATCGGAATCGGTGACGATGCTTCCGAATACGAACTC
CGATTCATCAGGCGGCGTGATCGTTTCGGTCTCTGGCAACATCGTGTTGTTTGGGATTATTATTGCTTCTGTTCGACGAGGTATGGTGACACAGATTCTAATGGCGTTTG
AAAGACACCAGGCTGAAGTTCTAGCAGCGAATGTTGCAGTCAGCCATGGCAATTTAACATTAACAGTCACAGCTTCTGTACACGGTTCCGTAGAGAAAACCATAGAGCAG
ATTAGAAACGATATCCTAAGCTTAAAGAAGTAA

mRNA sequence

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Protein sequence

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MYLSRWKVQILPKNKEQQEDGAKKITELLFVVMEAGTDSVIPLFPQILPVHESEVADKNASTSRKRRRPALEANGGVQKKGREKRKEMSESFYVLQSLVPNLSPKATREN
IVTETIEFIEFLQKQLTRLEMEKKASESVTMLPNTNSDSSGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQ
IRNDILSLKK

Lag0021360 (gene) of Sponge gourd (AG-4) v1 genome