; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0021376 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021376
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionAlways early, putative isoform 3
Genome locationchr7:7008187..7010864
RNA-Seq ExpressionLag0021376
SyntenyLag0021376
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0017053 - transcriptional repressor complex (cellular component)
InterPro domainsIPR010561 - Protein LIN-9/Protein ALWAYS EARLY
IPR028306 - Protein ALWAYS EARLY, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022973709.1 protein ALWAYS EARLY 3-like isoform X1 [Cucurbita maxima]3.3e-1283.67Show/hide
Query:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEVFTK
        AVRNRSTEMVEALFT+N+AYLSLPEGT+SVVGLIAM+TDHYSVL  F +
Subjt:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEVFTK

XP_022973711.1 protein ALWAYS EARLY 3-like isoform X3 [Cucurbita maxima]3.3e-1283.67Show/hide
Query:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEVFTK
        AVRNRSTEMVEALFT+N+AYLSLPEGT+SVVGLIAM+TDHYSVL  F +
Subjt:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEVFTK

XP_022973712.1 protein ALWAYS EARLY 3-like isoform X4 [Cucurbita maxima]3.3e-1283.67Show/hide
Query:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEVFTK
        AVRNRSTEMVEALFT+N+AYLSLPEGT+SVVGLIAM+TDHYSVL  F +
Subjt:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEVFTK

XP_031739375.1 protein ALWAYS EARLY 3 isoform X1 [Cucumis sativus]4.3e-1289.13Show/hide
Query:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEV
        AVRNRSTEMVEALFT+N+AYLSLPEGT+SVVGLIAM+TDHYSVL V
Subjt:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEV

XP_031739376.1 protein ALWAYS EARLY 3 isoform X3 [Cucumis sativus]4.3e-1289.13Show/hide
Query:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEV
        AVRNRSTEMVEALFT+N+AYLSLPEGT+SVVGLIAM+TDHYSVL V
Subjt:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEV

TrEMBL top hitse value%identityAlignment
A0A6J1I8A2 protein ALWAYS EARLY 3-like isoform X41.6e-1283.67Show/hide
Query:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEVFTK
        AVRNRSTEMVEALFT+N+AYLSLPEGT+SVVGLIAM+TDHYSVL  F +
Subjt:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEVFTK

A0A6J1I9E0 protein ALWAYS EARLY 3-like isoform X31.6e-1283.67Show/hide
Query:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEVFTK
        AVRNRSTEMVEALFT+N+AYLSLPEGT+SVVGLIAM+TDHYSVL  F +
Subjt:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEVFTK

A0A6J1IC18 protein ALWAYS EARLY 3-like isoform X23.6e-1290.91Show/hide
Query:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVL
        AVRNRSTEMVEALFT+N+AYLSLPEGT+SVVGLIAM+TDHYSVL
Subjt:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVL

A0A6J1IFF8 protein ALWAYS EARLY 3-like isoform X11.6e-1283.67Show/hide
Query:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEVFTK
        AVRNRSTEMVEALFT+N+AYLSLPEGT+SVVGLIAM+TDHYSVL  F +
Subjt:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEVFTK

A0A6J1IWY8 protein ALWAYS EARLY 3-like isoform X13.6e-1290.91Show/hide
Query:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVL
        AVRNRSTEMVEALFT+N+AYLSLPEGT+SVVGLIAM+TDHYSVL
Subjt:  AVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVL

SwissProt top hitse value%identityAlignment
Q6A331 Protein ALWAYS EARLY 11.3e-1178.26Show/hide
Query:  AVR-NRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLE
        AVR NRS EMVE LF +N+AYLSLPEGT+SV GLIAM+TDHYSV+E
Subjt:  AVR-NRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLE

Q6A332 Protein ALWAYS EARLY 35.8e-1281.4Show/hide
Query:  VRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVL
        V +RS EMVEAL+T+NKAYLSLPEGT+SVVGL AM+TDHYSVL
Subjt:  VRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVL

Q6A333 Protein ALWAYS EARLY 21.0e-1176.09Show/hide
Query:  AVRN-RSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLE
        A+RN RS +MVEALF +N+AYLSLPEGT+SV GLIAM+TDHYSV+E
Subjt:  AVRN-RSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLE

Arabidopsis top hitse value%identityAlignment
AT3G05380.1 DIRP ;Myb-like DNA-binding domain7.1e-1376.09Show/hide
Query:  AVRN-RSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLE
        A+RN RS +MVEALF +N+AYLSLPEGT+SV GLIAM+TDHYSV+E
Subjt:  AVRN-RSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLE

AT3G05380.2 DIRP ;Myb-like DNA-binding domain7.1e-1376.09Show/hide
Query:  AVRN-RSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLE
        A+RN RS +MVEALF +N+AYLSLPEGT+SV GLIAM+TDHYSV+E
Subjt:  AVRN-RSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLE

AT3G05380.4 DIRP ;Myb-like DNA-binding domain7.1e-1376.09Show/hide
Query:  AVRN-RSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLE
        A+RN RS +MVEALF +N+AYLSLPEGT+SV GLIAM+TDHYSV+E
Subjt:  AVRN-RSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLE

AT3G05380.5 DIRP ;Myb-like DNA-binding domain7.1e-1376.09Show/hide
Query:  AVRN-RSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLE
        A+RN RS +MVEALF +N+AYLSLPEGT+SV GLIAM+TDHYSV+E
Subjt:  AVRN-RSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLE

AT3G21430.2 DNA binding4.1e-1381.4Show/hide
Query:  VRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVL
        V +RS EMVEAL+T+NKAYLSLPEGT+SVVGL AM+TDHYSVL
Subjt:  VRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGAGCTCCCTCCTCCGTCTCCGACGGCGAGACAGAGGAGGGAGCTCCCTCCTCCCTCTCCGGCGCCGGAATCGAAGGGGCTGCTGCAGACTGCTGTAAGGAACCG
TTCTACAGAAATGGTCGAGGCTCTTTTCACCGTGAATAAGGCATATTTATCACTTCCAGAGGGCACTTCTTCAGTTGTTGGGCTAATTGCAATGATAACTGATCATTACA
GCGTACTGGAAGTATTTACCAAGCTCTTCTGGGACCTGAAAACATCGACGCATCTTTCCATTCATTGGTTATGTCCTATGGGTACCTTTATGGCTCTTCTGAGGTCTAAA
TTGATAGATGAATTCTCAGAGACAGTGAAAATGAACAAGAAAGCAGTGAGGGTTCAGGAGCAACAAGAAAGCCTCAAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGAGCTCCCTCCTCCGTCTCCGACGGCGAGACAGAGGAGGGAGCTCCCTCCTCCCTCTCCGGCGCCGGAATCGAAGGGGCTGCTGCAGACTGCTGTAAGGAACCG
TTCTACAGAAATGGTCGAGGCTCTTTTCACCGTGAATAAGGCATATTTATCACTTCCAGAGGGCACTTCTTCAGTTGTTGGGCTAATTGCAATGATAACTGATCATTACA
GCGTACTGGAAGTATTTACCAAGCTCTTCTGGGACCTGAAAACATCGACGCATCTTTCCATTCATTGGTTATGTCCTATGGGTACCTTTATGGCTCTTCTGAGGTCTAAA
TTGATAGATGAATTCTCAGAGACAGTGAAAATGAACAAGAAAGCAGTGAGGGTTCAGGAGCAACAAGAAAGCCTCAAAAAGTGA
Protein sequenceShow/hide protein sequence
MRELPPPSPTARQRRELPPPSPAPESKGLLQTAVRNRSTEMVEALFTVNKAYLSLPEGTSSVVGLIAMITDHYSVLEVFTKLFWDLKTSTHLSIHWLCPMGTFMALLRSK
LIDEFSETVKMNKKAVRVQEQQESLKK