; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0021381 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021381
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE3 ubiquitin-protein ligase RBBP6 isoform X2
Genome locationchr7:7074338..7075195
RNA-Seq ExpressionLag0021381
SyntenyLag0021381
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582225.1 hypothetical protein SDJN03_22227, partial [Cucurbita argyrosperma subsp. sororia]3.3e-5568.31Show/hide
Query:  MDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDPE
        M+DL+EEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDP+GLS+INP ILELAV NAKASVLS SGTNIRHVD+FDDPE
Subjt:  MDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDPE

Query:  GCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL
          FD+GEA+NSEPKK+K   K KK K  K +K                     ++ R     ++IVEDS C VGK+PKKKL L
Subjt:  GCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL

XP_022956118.1 uncharacterized protein LOC111457905 isoform X1 [Cucurbita moschata]3.8e-5669.4Show/hide
Query:  MDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDPE
        M+DL+EEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDP+GLSSINP ILELAV NAKASVLS SGTNIRHVD+FDDPE
Subjt:  MDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDPE

Query:  GCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL
          FD+GEA+NSEPKK+K   KK KK   K+ K                     ++ R     ++IVEDS CGVGK+PKKKL L
Subjt:  GCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL

XP_022956119.1 uncharacterized protein LOC111457905 isoform X2 [Cucurbita moschata]5.0e-5669.4Show/hide
Query:  MDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDPE
        M+DL+EEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDP+GLSSINP ILELAV NAKASVLS SGTNIRHVD+FDDPE
Subjt:  MDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDPE

Query:  GCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL
          FD+GEA+NSEPKK+K   KK KK   K+ K                     ++ R     ++IVEDS CGVGK+PKKKL L
Subjt:  GCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL

XP_022979960.1 uncharacterized protein LOC111479494 [Cucurbita maxima]8.6e-5669.52Show/hide
Query:  MDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDPE
        M+DL+EEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDP+GLSSINP ILELAV NAKASVLS SGTNIRHVD+FDDPE
Subjt:  MDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDPE

Query:  GCFDEGEAVNSEPKKR----KKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL
          FD+GEA+NSEPKK+    KK+KK KK K  KRQK                                IVEDS CGVGK+PKKKL L
Subjt:  GCFDEGEAVNSEPKKR----KKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL

XP_023527659.1 uncharacterized protein LOC111790822 isoform X1 [Cucurbita pepo subsp. pepo]1.6e-5468.62Show/hide
Query:  MDDLTEEERRALRGSKFAPLPSQPT-SSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDP
        M+DL+EEERRALRGSKFAPLPSQPT SSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDP+GLSSINP ILELAV NAKASVLS SGTNIRHVD+FDDP
Subjt:  MDDLTEEERRALRGSKFAPLPSQPT-SSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDP

Query:  EGCFDEGEAVNSEPKKR----KKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL
        E  FD+GEA+NSEPKK+    KK+KK K KK KK +K                              ++IVEDS CGVGK+PKKKL L
Subjt:  EGCFDEGEAVNSEPKKR----KKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL

TrEMBL top hitse value%identityAlignment
A0A0A0LAK0 Uncharacterized protein2.3e-5468.11Show/hide
Query:  MAMDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDD
        M M+DLTEEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFLHRKL+QDP+ LSSINP IL+LAV NAKASV S SGTNIRHVD+FDD
Subjt:  MAMDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDD

Query:  PEGCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL
        PE  FDEGE++NSEPKK+KK  KKKK K KK ++                              ++IVEDS+CGVG KPKKKL L
Subjt:  PEGCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL

A0A1S3AY37 uncharacterized protein LOC1034838325.6e-5367.03Show/hide
Query:  MAMDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDD
        M M+DLTEEERRALRGSKFAPLPSQ TSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDP+  SSINP IL+LAV NAKASV S SGTNIRHVD+FDD
Subjt:  MAMDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDD

Query:  PEGCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKK
        PE  FDEGE++NSEPKK+KK  KKKK K KK ++                              ++IVEDS+CGVGK P  K
Subjt:  PEGCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKK

A0A6J1GVW4 uncharacterized protein LOC111457905 isoform X11.9e-5669.4Show/hide
Query:  MDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDPE
        M+DL+EEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDP+GLSSINP ILELAV NAKASVLS SGTNIRHVD+FDDPE
Subjt:  MDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDPE

Query:  GCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL
          FD+GEA+NSEPKK+K   KK KK   K+ K                     ++ R     ++IVEDS CGVGK+PKKKL L
Subjt:  GCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL

A0A6J1GY51 uncharacterized protein LOC111457905 isoform X22.4e-5669.4Show/hide
Query:  MDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDPE
        M+DL+EEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDP+GLSSINP ILELAV NAKASVLS SGTNIRHVD+FDDPE
Subjt:  MDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDPE

Query:  GCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL
          FD+GEA+NSEPKK+K   KK KK   K+ K                     ++ R     ++IVEDS CGVGK+PKKKL L
Subjt:  GCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL

A0A6J1IUT6 uncharacterized protein LOC1114794944.1e-5669.52Show/hide
Query:  MDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDPE
        M+DL+EEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFL RKLHQDP+GLSSINP ILELAV NAKASVLS SGTNIRHVD+FDDPE
Subjt:  MDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDPE

Query:  GCFDEGEAVNSEPKKR----KKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL
          FD+GEA+NSEPKK+    KK+KK KK K  KRQK                                IVEDS CGVGK+PKKKL L
Subjt:  GCFDEGEAVNSEPKKR----KKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18540.1 unknown protein3.7e-3361.76Show/hide
Query:  DDLTEEERRALRGSKFAPLPSQPTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVL----SGSGTNIRHVDSF
        ++LTE+E+RALRGSKFAPL S P+SSRS  PRLAHPGGPLKTNKAAALAKFL RKL QDP+GL+SI+P ++ELAV NAK +V+    S SG  I+HV SF
Subjt:  DDLTEEERRALRGSKFAPLPSQPTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVL----SGSGTNIRHVDSF

Query:  DDPEGCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQK
        +D E   D+ +  N++  K+KK K  KKKK +K++K
Subjt:  DDPEGCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQK

AT5G18540.2 unknown protein3.7e-3361.76Show/hide
Query:  DDLTEEERRALRGSKFAPLPSQPTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVL----SGSGTNIRHVDSF
        ++LTE+E+RALRGSKFAPL S P+SSRS  PRLAHPGGPLKTNKAAALAKFL RKL QDP+GL+SI+P ++ELAV NAK +V+    S SG  I+HV SF
Subjt:  DDLTEEERRALRGSKFAPLPSQPTSSRSH-PRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVL----SGSGTNIRHVDSF

Query:  DDPEGCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQK
        +D E   D+ +  N++  K+KK K  KKKK +K++K
Subjt:  DDPEGCFDEGEAVNSEPKKRKKDKKKKKKKMKKRQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGGACGATCTAACCGAAGAAGAAAGACGCGCTTTACGGGGCAGCAAATTCGCGCCGCTCCCATCCCAGCCCACTTCCTCTCGATCTCACCCAAGGTTGGCTCA
CCCAGGTGGACCATTGAAGACCAACAAGGCGGCGGCTCTGGCCAAGTTTCTCCACAGAAAGTTGCACCAAGATCCCCATGGCTTGTCTTCCATCAATCCTGACATTTTGG
AGCTCGCCGTCAACAATGCCAAGGCCTCTGTTCTTTCCGGTTCTGGCACAAATATTCGCCATGTGGATTCGTTTGATGACCCTGAGGGCTGTTTTGATGAAGGGGAAGCC
GTGAATTCTGAGCCTAAAAAGCGAAAGAAGGACAAGAAGAAGAAGAAGAAGAAGATGAAGAAGAGGCAAAAGGTTGGAATTCCTTCATGGTTTTGTGTTAAGCTCTATAT
AGTTTTAGTGTTGCCTCTGTTTCCTCGTGATGATAGATATGTTGTGCTTGTGCGGCAGATTGTTGAGGACTCCGATTGTGGCGTTGGGAAAAAGCCCAAAAAGAAGTTGA
TATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATGGACGATCTAACCGAAGAAGAAAGACGCGCTTTACGGGGCAGCAAATTCGCGCCGCTCCCATCCCAGCCCACTTCCTCTCGATCTCACCCAAGGTTGGCTCA
CCCAGGTGGACCATTGAAGACCAACAAGGCGGCGGCTCTGGCCAAGTTTCTCCACAGAAAGTTGCACCAAGATCCCCATGGCTTGTCTTCCATCAATCCTGACATTTTGG
AGCTCGCCGTCAACAATGCCAAGGCCTCTGTTCTTTCCGGTTCTGGCACAAATATTCGCCATGTGGATTCGTTTGATGACCCTGAGGGCTGTTTTGATGAAGGGGAAGCC
GTGAATTCTGAGCCTAAAAAGCGAAAGAAGGACAAGAAGAAGAAGAAGAAGAAGATGAAGAAGAGGCAAAAGGTTGGAATTCCTTCATGGTTTTGTGTTAAGCTCTATAT
AGTTTTAGTGTTGCCTCTGTTTCCTCGTGATGATAGATATGTTGTGCTTGTGCGGCAGATTGTTGAGGACTCCGATTGTGGCGTTGGGAAAAAGCCCAAAAAGAAGTTGA
TATTGTGA
Protein sequenceShow/hide protein sequence
MAMDDLTEEERRALRGSKFAPLPSQPTSSRSHPRLAHPGGPLKTNKAAALAKFLHRKLHQDPHGLSSINPDILELAVNNAKASVLSGSGTNIRHVDSFDDPEGCFDEGEA
VNSEPKKRKKDKKKKKKKMKKRQKVGIPSWFCVKLYIVLVLPLFPRDDRYVVLVRQIVEDSDCGVGKKPKKKLIL