| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0040355.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.6e-46 | 68.97 | Show/hide |
Query: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
YCDANWV DNDEV+STSGYVF+ GGGAISWKS KQTCIARSTMESEFIALELAGQEAEW++ + AK+SVYNGK RH
Subjt: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
Query: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
IRLRH VVKQLLK G ISLE+VRSE+NLADPLTKGLTR+++L+SS
Subjt: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
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| TYK07981.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.6e-46 | 68.97 | Show/hide |
Query: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
YCDANWV DNDEV+STSGYVF+ GGGAISWKS KQTCIARSTMESEFIALELAGQEAEW++ + AK+SVYNGK RH
Subjt: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
Query: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
IRLRH VVKQLLK G ISLE+VRSE+NLADPLTKGLTR+++L+SS
Subjt: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
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| TYK11299.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.6e-46 | 68.97 | Show/hide |
Query: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
YCDANWV DNDEV+STSGYVF+ GGGAISWKS KQTCIARSTMESEFIALELAGQEAEW++ + AK+SVYNGK RH
Subjt: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
Query: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
IRLRH VVKQLLK G ISLE+VRSE+NLADPLTKGLTR+++L+SS
Subjt: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
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| TYK23072.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.6e-46 | 68.97 | Show/hide |
Query: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
YCDANWV DNDEV+STSGYVF+ GGGAISWKS KQTCIARSTMESEFIALELAGQEAEW++ + AK+SVYNGK RH
Subjt: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
Query: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
IRLRH VVKQLLK G ISLE+VRSE+NLADPLTKGLTR+++L+SS
Subjt: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
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| TYK23349.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.6e-46 | 68.97 | Show/hide |
Query: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
YCDANWV DNDEV+STSGYVF+ GGGAISWKS KQTCIARSTMESEFIALELAGQEAEW++ + AK+SVYNGK RH
Subjt: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
Query: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
IRLRH VVKQLLK G ISLE+VRSE+NLADPLTKGLTR+++L+SS
Subjt: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TG11 Ty1-copia retrotransposon protein | 1.3e-46 | 68.97 | Show/hide |
Query: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
YCDANWV DNDEV+STSGYVF+ GGGAISWKS KQTCIARSTMESEFIALELAGQEAEW++ + AK+SVYNGK RH
Subjt: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
Query: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
IRLRH VVKQLLK G ISLE+VRSE+NLADPLTKGLTR+++L+SS
Subjt: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
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| A0A5D3C7Z8 Ty1-copia retrotransposon protein | 1.3e-46 | 68.97 | Show/hide |
Query: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
YCDANWV DNDEV+STSGYVF+ GGGAISWKS KQTCIARSTMESEFIALELAGQEAEW++ + AK+SVYNGK RH
Subjt: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
Query: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
IRLRH VVKQLLK G ISLE+VRSE+NLADPLTKGLTR+++L+SS
Subjt: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
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| A0A5D3CM58 Ty1-copia retrotransposon protein | 1.3e-46 | 68.97 | Show/hide |
Query: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
YCDANWV DNDEV+STSGYVF+ GGGAISWKS KQTCIARSTMESEFIALELAGQEAEW++ + AK+SVYNGK RH
Subjt: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
Query: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
IRLRH VVKQLLK G ISLE+VRSE+NLADPLTKGLTR+++L+SS
Subjt: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
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| A0A5D3DHN5 Ty1-copia retrotransposon protein | 1.3e-46 | 68.97 | Show/hide |
Query: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
YCDANWV DNDEV+STSGYVF+ GGGAISWKS KQTCIARSTMESEFIALELAGQEAEW++ + AK+SVYNGK RH
Subjt: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
Query: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
IRLRH VVKQLLK G ISLE+VRSE+NLADPLTKGLTR+++L+SS
Subjt: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
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| A0A5D3DJE2 Ty1-copia retrotransposon protein | 1.3e-46 | 68.97 | Show/hide |
Query: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
YCDANWV DNDEV+STSGYVF+ GGGAISWKS KQTCIARSTMESEFIALELAGQEAEW++ + AK+SVYNGK RH
Subjt: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRRI-------------------------AKSSVYNGKRRH
Query: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
IRLRH VVKQLLK G ISLE+VRSE+NLADPLTKGLTR+++L+SS
Subjt: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTRRVILESS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.3e-08 | 28.68 | Show/hide |
Query: YCDANWVIDNDEVSSTSGYVF-VFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLR------------------------RIAKSSVYNGKRRH
Y D++W + ST+GY+F +F I W + +Q +A S+ E+E++AL A +EA WL+ IA + + + +H
Subjt: YCDANWVIDNDEVSSTSGYVF-VFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLR------------------------RIAKSSVYNGKRRH
Query: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGL
I +++ ++ ++ VI LEY+ +E LAD TK L
Subjt: IRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGL
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| P0CV72 Secreted RxLR effector protein 161 | 3.1e-10 | 45.45 | Show/hide |
Query: GLRLCAPADLKAVGPYCYCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWL
GL K VG Y DA+W D + STSGY+F GG +SW+S KQ +A S+ E E++AL A QEA WL
Subjt: GLRLCAPADLKAVGPYCYCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.6e-14 | 32.35 | Show/hide |
Query: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRR-----------------------IAKSSVYNGKRRHIR
Y DA+ D D S++GY+F F GGAISW+S Q C+A ST E+E+IA G+E WL+R ++K+S+Y+ + +HI
Subjt: YCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWLRR-----------------------IAKSSVYNGKRRHIR
Query: LRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTR
+R+ +++++ + + + + N AD LTK + R
Subjt: LRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTR
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.1e-10 | 25.9 | Show/hide |
Query: YCYCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWL------------------------RRIAKSSVYNGKRR
+ Y DA+W D D+ ST+GY+ G ISW S KQ + RS+ E+E+ ++ E +W+ + + V++ + +
Subjt: YCYCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWL------------------------RRIAKSSVYNGKRR
Query: HIRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTR
HI + + ++ ++ G + + +V + LAD LTK L+R
Subjt: HIRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.8e-10 | 26.62 | Show/hide |
Query: YCYCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWL------------------------RRIAKSSVYNGKRR
+ Y DA+W D D+ ST+GY+ G ISW S KQ + RS+ E+E+ ++ E +W+ + + V++ + +
Subjt: YCYCDANWVIDNDEVSSTSGYVFVFGGGAISWKSAKQTCIARSTMESEFIALELAGQEAEWL------------------------RRIAKSSVYNGKRR
Query: HIRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTR
HI L + ++ ++ G + + +V + LAD LTK L+R
Subjt: HIRLRHGVVKQLLKGGVISLEYVRSERNLADPLTKGLTR
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