CuGenDBv2

Gene ID	Lag0021397
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	translocator protein homolog
Genome location	chr7:7223835..7224332
RNA-Seq Expression	Lag0021397
Synteny	Lag0021397
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR004307 - TspO/MBR-related protein IPR038330 - TspO/MBR-related superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6597521.1 Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]

4.6e-77

91.41

Show/hide

Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIPL+LTIAVIFLFGRSSRHFPNRNRP+WVAPLW  HLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        WNPLVLV+RA  LA LFC LD VTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL AVTYVFIDL
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

XP_022945022.1 translocator protein homolog [Cucurbita moschata]

4.6e-77

91.41

Show/hide

Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIPL+LTIAVIFLFGRSSRHFPNRNRP+WVAPLW  HLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        WNPLVLV+RA  LA LFC LD VTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL AVTYVFIDL
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

XP_022973726.1 translocator protein homolog [Cucurbita maxima]

3.2e-78

92.02

Show/hide

Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIPL+LTIAVIFLFGRSSRHFPNRNRP+WVAPLW  HLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        WNPLVLV+RA+ LA LFC LDFVTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL AVTYVFIDL
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

XP_023540366.1 translocator protein homolog [Cucurbita pepo subsp. pepo]

1.6e-77

91.41

Show/hide

Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIPL+LTIAVIFLFGRSSRHFPNRNRP+WVAPLW  HLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        WNPLVLV+RA+ LA LFC LD VTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL AVTYVFIDL
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

XP_038878873.1 translocator protein homolog [Benincasa hispida]

2.0e-80

93.25

Show/hide

Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRS+RHFPNRNRP+W+ PLW  HLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        WNPLVLV+R+V LA LFC LDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L583 Uncharacterized protein

5.5e-76

87.73

Show/hide

Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIP+SLTIA IFLFGRSSRH+PNRNRP+W+ PLW   LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        WNPLVLV+R+V +A LFC LD VTLFACY  FKRVNPFAKDL+KPCLAWTAYLSAVTYVFIDL
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

A0A1S4DTF2 translocator protein homolog

1.1e-76

88.34

Show/hide

Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIP+SLTIAVIFLFGRSSRHFPNRNRP+W+ PLW   LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        W+PLVLV+R+V +A LFC LDFVTLFACYR F+RVNPFAKDL+KPCLAWTAYLSAVTYVFI L
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

A0A5D3CWC4 Translocator protein-like protein

1.1e-76

88.34

Show/hide

Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIP+SLTIAVIFLFGRSSRHFPNRNRP+W+ PLW   LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        W+PLVLV+R+V +A LFC LDFVTLFACYR F+RVNPFAKDL+KPCLAWTAYLSAVTYVFI L
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

A0A6J1FZS9 translocator protein homolog

2.2e-77

91.41

Show/hide

Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIPL+LTIAVIFLFGRSSRHFPNRNRP+WVAPLW  HLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        WNPLVLV+RA  LA LFC LD VTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL AVTYVFIDL
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

A0A6J1ICB9 translocator protein homolog

1.5e-78

92.02

Show/hide

Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIPL+LTIAVIFLFGRSSRHFPNRNRP+WVAPLW  HLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        WNPLVLV+RA+ LA LFC LDFVTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL AVTYVFIDL
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

SwissProt top hits

e value

%identity

Alignment

E2RDM9 Translocator protein 2

1.9e-04

28.97

Show/hide

Query:  AVSVAIP-LSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWAD-GGFHGGSNALPLYIAHLSLSVVWNPLV--LVMRAVPL
        A+ VA+P L   +  +    R  R +    +P W  P        I   F++G A++LVW D GG  G   ALPL +  + L+V W  L+      A  L
Subjt:  AVSVAIP-LSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWAD-GGFHGGSNALPLYIAHLSLSVVWNPLV--LVMRAVPL

Query:  ASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY
        A L   L +  + +    +  +N  A  L+ P LAW    +++ Y
Subjt:  ASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY

O82245 Translocator protein homolog

1.8e-28

40.52

Show/hide

Query:  ESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNP
        + K   AKR L+SL V+VA P+ +T+   +  G S  +        W+ PLW  H + + SS L+GLAAWLVW DGGFH   NAL LY+A   L +VW+P
Subjt:  ESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNP

Query:  LVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAV
        +   + +              LF CY+ F  ++P A +L+KPCLAW A+++AV
Subjt:  LVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAV

Arabidopsis top hits

e value

%identity

Alignment

AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related

1.3e-29

40.52

Show/hide

Query:  ESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNP
        + K   AKR L+SL V+VA P+ +T+   +  G S  +        W+ PLW  H + + SS L+GLAAWLVW DGGFH   NAL LY+A   L +VW+P
Subjt:  ESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNP

Query:  LVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAV
        +   + +              LF CY+ F  ++P A +L+KPCLAW A+++AV
Subjt:  LVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACTTCCAGACCGGAATCCAAGTACACCAAGGCCAAGAGAGCGCTCCGATCCCTCGCCGTCTCCGTCGCCATTCCCCTCTCCCTCACAATCGCCGTCATCTTCCTCTT
CGGCCGCTCCTCCCGCCATTTCCCCAACCGGAACCGTCCGGTTTGGGTGGCGCCGCTCTGGTTCTTCCATCTCTCCTCCATCGGCTCCTCCTTCCTGATCGGCCTCGCCG
CCTGGCTCGTTTGGGCCGACGGCGGCTTCCACGGCGGTTCCAACGCCCTTCCGCTCTACATCGCGCATCTCTCGCTCAGCGTCGTTTGGAATCCTCTCGTGCTCGTGATG
CGCGCCGTTCCGCTTGCGTCTCTGTTCTGCGCCTTGGATTTTGTGACTCTGTTTGCTTGTTATCGGACCTTCAAGCGAGTGAATCCTTTCGCTAAGGATCTGATTAAGCC
CTGTTTGGCTTGGACTGCCTATCTCTCTGCTGTTACTTATGTGTTTATTGATCTTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MTSRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVM
RAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

Lag0021397 (gene) of Sponge gourd (AG-4) v1 genome