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Lag0021410 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021410
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDynein light chain
Genome locationchr7:7402061..7402429
RNA-Seq ExpressionLag0021410
SyntenyLag0021410
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030286 - dynein complex (cellular component)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597532.1 Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia]4.8e-3691.3Show/hide
Query:  MNQDSKRSNP---MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG
        MN DSKRSNP   MVKPESEDRKPSSAA  VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHC++GRNFG
Subjt:  MNQDSKRSNP---MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG

KAG7028990.1 Dynein light chain 1, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma]4.8e-3691.3Show/hide
Query:  MNQDSKRSNP---MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG
        MN DSKRSNP   MVKPESEDRKPSSAA  VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHC++GRNFG
Subjt:  MNQDSKRSNP---MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG

XP_022945423.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]4.8e-3691.3Show/hide
Query:  MNQDSKRSNP---MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG
        MN DSKRSNP   MVKPESEDRKPSSAA  VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHC++GRNFG
Subjt:  MNQDSKRSNP---MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG

XP_022973755.1 dynein light chain 1, cytoplasmic-like isoform X1 [Cucurbita maxima]3.7e-3692.31Show/hide
Query:  MNQDSKRSNP--MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG
        MN DSKRSNP  MVKPESEDRKPSSAA  VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHC++GRNFG
Subjt:  MNQDSKRSNP--MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG

XP_022973756.1 dynein light chain 1, cytoplasmic-like isoform X2 [Cucurbita maxima]1.1e-3590.22Show/hide
Query:  MNQDSKRSNP--MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGR
        MN DSKRSNP  MVKPESEDRKPSSAA  VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHC++GRNF +
Subjt:  MNQDSKRSNP--MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGR

TrEMBL top hitse value%identityAlignment
A0A6J1G0U9 Dynein light chain2.3e-3691.3Show/hide
Query:  MNQDSKRSNP---MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG
        MN DSKRSNP   MVKPESEDRKPSSAA  VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHC++GRNFG
Subjt:  MNQDSKRSNP---MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG

A0A6J1GVA3 Dynein light chain4.4e-3588.04Show/hide
Query:  MNQDSKRSNP---MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG
        MNQ+SKRSNP   MVKPESEDRK SS AA   KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAE IKKEFD+RHGPTWHCIVGRNFG
Subjt:  MNQDSKRSNP---MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG

A0A6J1I9I2 Dynein light chain5.2e-3690.22Show/hide
Query:  MNQDSKRSNP--MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGR
        MN DSKRSNP  MVKPESEDRKPSSAA  VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHC++GRNF +
Subjt:  MNQDSKRSNP--MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGR

A0A6J1IC60 Dynein light chain1.8e-3692.31Show/hide
Query:  MNQDSKRSNP--MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG
        MN DSKRSNP  MVKPESEDRKPSSAA  VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHC++GRNFG
Subjt:  MNQDSKRSNP--MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG

A0A6J1IQ69 Dynein light chain1.9e-3388.04Show/hide
Query:  MNQDSKRSNP---MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG
        MNQ+SKRSNP   MVKPESEDRK SS AA   KKIVIKSADMFG MQKEAVDIAIAAFEKHSVEKDVAEQIKKEFD+RHGPTWHCIVGRNFG
Subjt:  MNQDSKRSNP---MVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG

SwissProt top hitse value%identityAlignment
Q22799 Dynein light chain 1, cytoplasmic8.1e-1863.49Show/hide
Query:  VVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG
        +V +K VIK+ADM  DMQ++A+D A  A EK+++EKD+A  IKKEFDK++ PTWHCIVGRNFG
Subjt:  VVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG

Q3MHR3 Dynein light chain 2, cytoplasmic2.3e-1766.67Show/hide
Query:  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG
        +K VIK+ADM  DMQ++AVD A  A EK+++EKD+A  IKKEFDK++ PTWHCIVGRNFG
Subjt:  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG

Q78P75 Dynein light chain 2, cytoplasmic2.3e-1766.67Show/hide
Query:  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG
        +K VIK+ADM  DMQ++AVD A  A EK+++EKD+A  IKKEFDK++ PTWHCIVGRNFG
Subjt:  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG

Q96FJ2 Dynein light chain 2, cytoplasmic2.3e-1766.67Show/hide
Query:  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG
        +K VIK+ADM  DMQ++AVD A  A EK+++EKD+A  IKKEFDK++ PTWHCIVGRNFG
Subjt:  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG

Q9D0M5 Dynein light chain 2, cytoplasmic2.3e-1766.67Show/hide
Query:  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG
        +K VIK+ADM  DMQ++AVD A  A EK+++EKD+A  IKKEFDK++ PTWHCIVGRNFG
Subjt:  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG

Arabidopsis top hitse value%identityAlignment
AT1G52240.2 RHO guanyl-nucleotide exchange factor 111.1e-0642.62Show/hide
Query:  KIVIKSADMFGDMQKEAVDIAIAAFEKHSVE--KDVAEQIKKEFDKRHGPTWHCIVGRNFG
        K +++ +DM   MQ +A+  A  A +   V   K +A  IKKEFD+R+G  W C+VG NFG
Subjt:  KIVIKSADMFGDMQKEAVDIAIAAFEKHSVE--KDVAEQIKKEFDKRHGPTWHCIVGRNFG

AT3G16120.1 Dynein light chain type 1 family protein5.6e-0640.98Show/hide
Query:  KIVIKSADMFGDMQKEAVDIAIAAFEKHSV--EKDVAEQIKKEFDKRHGPTWHCIVGRNFG
        K  ++  DM   MQ +A+ IA  + +   V     +A  IKKEFD+R+G  W C+VG NFG
Subjt:  KIVIKSADMFGDMQKEAVDIAIAAFEKHSV--EKDVAEQIKKEFDKRHGPTWHCIVGRNFG

AT4G15930.1 Dynein light chain type 1 family protein7.7e-2468.83Show/hide
Query:  EDRKPS----SAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG
        +DR+ S     A+   GK+ VIKSADM  DMQKEA++IAI+AFEK+SVEKD+AE IKKEFDK+HG TWHCIVGRNFG
Subjt:  EDRKPS----SAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG

AT4G27360.1 Dynein light chain type 1 family protein2.8e-0539.34Show/hide
Query:  KIVIKSADMFGDMQKEAVDIAIAAFEKHSVEK--DVAEQIKKEFDKRHGPTWHCIVGRNFG
        K V+   DM   M+++A+ +A  A +   V +   +A  IKKEFD+ +G  W CIVG +FG
Subjt:  KIVIKSADMFGDMQKEAVDIAIAAFEKHSVEK--DVAEQIKKEFDKRHGPTWHCIVGRNFG

AT5G20110.1 Dynein light chain type 1 family protein3.3e-0637.78Show/hide
Query:  QDSKRSNPMVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIA---IAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG
        ++ ++S   V+ ++  R  ++A  +    + I +ADM G MQ  A   A   + + EK S  K +A  +KKEFDK +GP WHCIVG +FG
Subjt:  QDSKRSNPMVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIA---IAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAAGATTCCAAGCGAAGCAATCCCATGGTGAAACCTGAATCTGAGGATCGCAAACCCTCGTCTGCCGCTGCCGTCGTCGGCAAGAAAATCGTCATCAAGAGCGC
CGATATGTTCGGAGACATGCAGAAGGAGGCTGTTGACATTGCCATAGCGGCATTTGAGAAGCATTCCGTCGAGAAGGATGTTGCCGAGCAGATAAAGAAGGAGTTCGATA
AGAGGCATGGCCCGACCTGGCATTGCATCGTCGGTCGTAATTTTGGTAGACTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCAAGATTCCAAGCGAAGCAATCCCATGGTGAAACCTGAATCTGAGGATCGCAAACCCTCGTCTGCCGCTGCCGTCGTCGGCAAGAAAATCGTCATCAAGAGCGC
CGATATGTTCGGAGACATGCAGAAGGAGGCTGTTGACATTGCCATAGCGGCATTTGAGAAGCATTCCGTCGAGAAGGATGTTGCCGAGCAGATAAAGAAGGAGTTCGATA
AGAGGCATGGCCCGACCTGGCATTGCATCGTCGGTCGTAATTTTGGTAGACTGTGA
Protein sequenceShow/hide protein sequence
MNQDSKRSNPMVKPESEDRKPSSAAAVVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGRL