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Lag0021417 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021417
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr7:7453021..7454075
RNA-Seq ExpressionLag0021417
SyntenyLag0021417
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602403.1 E3 ubiquitin-protein ligase RGLG2, partial [Cucurbita argyrosperma subsp. sororia]5.5e-0564.58Show/hide
Query:  MILNYHRDLPSDCLLF---SPRLNLPNTSSNSSLYLNLRYQNLPIGVV
        +ILN+  DLP++ LL    SPRL+LPN SSNSSLYL+LRY+NLP G V
Subjt:  MILNYHRDLPSDCLLF---SPRLNLPNTSSNSSLYLNLRYQNLPIGVV
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTGAACTATCACCGGGATCTTCCTTCGGATTGCCTCCTCTTTTCTCCTCGTCTCAATCTCCCAAACACCTCCTCCAATTCCTCGCTATATCTAAACCTTCGGTA
CCAAAATTTGCCTATTGGTGTGGTTTTCGAGGCCTTGGCAGATTTGGAACAAAGAGAGAATGAAGATTTGGCTGAGATACAACAAGGAATTGGAGGAGGTGTTTGGGAGA
TCGAGACGAGAAGAACAAAGGAGGCGATTCAAAGGAAGATCGTGGCAATAGTTCAAAGTCAGAAGAGCTTCGATTGGAGGAGGTTGAAGGAAGCTCAAATCCCTAGCATC
AGAAAGCTCTTGAGGAGGAAATTGCGGCTGGTGAGTGCCGTGAGTGGCTCGATTCCGAAGGTGAATTCGAGATTCATTAAACCTTCAGATTTGAAAACATGTATGTGGAA
GGAGAAGGAGAACAACGTGAAAAGGGAGAGAGGACACGAGAGATCTAAAGAACACATGGGATACAAGTGGCGAAGGATAGCAAATAATGAGAGAAACGAAGAGGGAGAGA
GGATGGAGAGAAACATGAAACTAGACAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCTGAACTATCACCGGGATCTTCCTTCGGATTGCCTCCTCTTTTCTCCTCGTCTCAATCTCCCAAACACCTCCTCCAATTCCTCGCTATATCTAAACCTTCGGTA
CCAAAATTTGCCTATTGGTGTGGTTTTCGAGGCCTTGGCAGATTTGGAACAAAGAGAGAATGAAGATTTGGCTGAGATACAACAAGGAATTGGAGGAGGTGTTTGGGAGA
TCGAGACGAGAAGAACAAAGGAGGCGATTCAAAGGAAGATCGTGGCAATAGTTCAAAGTCAGAAGAGCTTCGATTGGAGGAGGTTGAAGGAAGCTCAAATCCCTAGCATC
AGAAAGCTCTTGAGGAGGAAATTGCGGCTGGTGAGTGCCGTGAGTGGCTCGATTCCGAAGGTGAATTCGAGATTCATTAAACCTTCAGATTTGAAAACATGTATGTGGAA
GGAGAAGGAGAACAACGTGAAAAGGGAGAGAGGACACGAGAGATCTAAAGAACACATGGGATACAAGTGGCGAAGGATAGCAAATAATGAGAGAAACGAAGAGGGAGAGA
GGATGGAGAGAAACATGAAACTAGACAAATGA
Protein sequenceShow/hide protein sequence
MILNYHRDLPSDCLLFSPRLNLPNTSSNSSLYLNLRYQNLPIGVVFEALADLEQRENEDLAEIQQGIGGGVWEIETRRTKEAIQRKIVAIVQSQKSFDWRRLKEAQIPSI
RKLLRRKLRLVSAVSGSIPKVNSRFIKPSDLKTCMWKEKENNVKRERGHERSKEHMGYKWRRIANNERNEEGERMERNMKLDK