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Lag0021423 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021423
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr7:7573607..7574802
RNA-Seq ExpressionLag0021423
SyntenyLag0021423
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]1.3e-5153.57Show/hide
Query:  GPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPS
        GP    S RKRKA  REAR+      +Y   +A     +EF+E EA ++  PHNDALV+TL + N K+HRIL+DGGSS D+ SL A+KAM L  E+LK S
Subjt:  GPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPS

Query:  LTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQKESRECYWTALK
        LT L+GFGGER+ P+G  +LP+TF     ++T+M++FLVVD  S+YN IL RPT+H ++AI STYHQ +KFPTP  V  +KGEQ+ SRECY+T+++
Subjt:  LTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQKESRECYWTALK

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]2.4e-5351.6Show/hide
Query:  PSLTKD-DRDKEEPLREIKTIFGGPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGS
        P  T++ + D + P REI+TI GGP      RKRKA  RE R+      +Y   +AK    +EF+E EA ++  PHND LV+TL + N K+HRIL+DGGS
Subjt:  PSLTKD-DRDKEEPLREIKTIFGGPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGS

Query:  SADVLSLAAFKAMQLERELLKPSLTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNV
        SAD++SL A+KAM L     K S  SLV F GERV PEG T+L VTFG G  ++T +++FLV+D  S+YNAILGRPT+H +KAI STYHQ + FPT   +
Subjt:  SADVLSLAAFKAMQLERELLKPSLTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNV

Query:  RIVKGEQKESRECYWTALK
          +K EQ+ SRECY+T++K
Subjt:  RIVKGEQKESRECYWTALK

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]2.6e-5255.61Show/hide
Query:  GPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPS
        GP    S RKRKA  REAR+  +   +Y   +     ++EF+E EA ++  PHNDALV+TL + NVK+HRIL+DGGSSAD++S  A+KAM L  ++LK S
Subjt:  GPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPS

Query:  LTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQKESRECYWTALK
           LVGFGGERV  EG  +LPVTFG G  ++TKM++FLVV+  S+YNAILGRPT+H +KAI STYHQ  KFPT   V  +KGEQ+ SRECY T+++
Subjt:  LTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQKESRECYWTALK

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]1.3e-5452.36Show/hide
Query:  DRDKEEPLREIKTIFGGPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSL
        + D + P++EI+TIFGGP      +KRKA  +EAR+ P Y  +Y          ++F+E E   +  PHNDALV+TL + N K+HRIL+DGGSS  ++SL
Subjt:  DRDKEEPLREIKTIFGGPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSL

Query:  AAFKAMQLERELLKPSLTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQ
         A+KAM L  + LK +L  LVGFGGERV  +   KLPVTFG+G   +TK++ FLVVD  S+YNAILGRPT+H +KAI STYH+ LKFPT   +  VKGEQ
Subjt:  AAFKAMQLERELLKPSLTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQ

Query:  KESRECYWTALK
        + S ECY+T+L+
Subjt:  KESRECYWTALK

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]5.0e-5154.31Show/hide
Query:  GGPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLKP
        GGP    S RKRKA  REAR+      +Y   +A    ++EF+E EA ++  PHNDALV+TL + NVK+HRIL+DGGSSAD++S   +K M L  ++LK 
Subjt:  GGPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLKP

Query:  SLTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQKESRECYWTALK
        S   L+GFG ERV PEG  +L VTFG G  ++TKM++FLVVD  S+YNAILGR T+H +KAI STYHQ +KFPT   V  +KGEQ+ SRECY+T+++
Subjt:  SLTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQKESRECYWTALK

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159016.3e-5253.57Show/hide
Query:  GPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPS
        GP    S RKRKA  REAR+      +Y   +A     +EF+E EA ++  PHNDALV+TL + N K+HRIL+DGGSS D+ SL A+KAM L  E+LK S
Subjt:  GPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPS

Query:  LTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQKESRECYWTALK
        LT L+GFGGER+ P+G  +LP+TF     ++T+M++FLVVD  S+YN IL RPT+H ++AI STYHQ +KFPTP  V  +KGEQ+ SRECY+T+++
Subjt:  LTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQKESRECYWTALK

A0A6J1D8C9 uncharacterized protein LOC1110183001.2e-5351.6Show/hide
Query:  PSLTKD-DRDKEEPLREIKTIFGGPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGS
        P  T++ + D + P REI+TI GGP      RKRKA  RE R+      +Y   +AK    +EF+E EA ++  PHND LV+TL + N K+HRIL+DGGS
Subjt:  PSLTKD-DRDKEEPLREIKTIFGGPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGS

Query:  SADVLSLAAFKAMQLERELLKPSLTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNV
        SAD++SL A+KAM L     K S  SLV F GERV PEG T+L VTFG G  ++T +++FLV+D  S+YNAILGRPT+H +KAI STYHQ + FPT   +
Subjt:  SADVLSLAAFKAMQLERELLKPSLTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNV

Query:  RIVKGEQKESRECYWTALK
          +K EQ+ SRECY+T++K
Subjt:  RIVKGEQKESRECYWTALK

A0A6J1DQY2 uncharacterized protein LOC1110223211.3e-5255.61Show/hide
Query:  GPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPS
        GP    S RKRKA  REAR+  +   +Y   +     ++EF+E EA ++  PHNDALV+TL + NVK+HRIL+DGGSSAD++S  A+KAM L  ++LK S
Subjt:  GPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPS

Query:  LTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQKESRECYWTALK
           LVGFGGERV  EG  +LPVTFG G  ++TKM++FLVV+  S+YNAILGRPT+H +KAI STYHQ  KFPT   V  +KGEQ+ SRECY T+++
Subjt:  LTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQKESRECYWTALK

A0A6J1DV51 uncharacterized protein LOC1110246626.1e-5552.36Show/hide
Query:  DRDKEEPLREIKTIFGGPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSL
        + D + P++EI+TIFGGP      +KRKA  +EAR+ P Y  +Y          ++F+E E   +  PHNDALV+TL + N K+HRIL+DGGSS  ++SL
Subjt:  DRDKEEPLREIKTIFGGPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSL

Query:  AAFKAMQLERELLKPSLTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQ
         A+KAM L  + LK +L  LVGFGGERV  +   KLPVTFG+G   +TK++ FLVVD  S+YNAILGRPT+H +KAI STYH+ LKFPT   +  VKGEQ
Subjt:  AAFKAMQLERELLKPSLTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQ

Query:  KESRECYWTALK
        + S ECY+T+L+
Subjt:  KESRECYWTALK

A0A6J1DXV4 uncharacterized protein LOC1110251472.4e-5154.31Show/hide
Query:  GGPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLKP
        GGP    S RKRKA  REAR+      +Y   +A    ++EF+E EA ++  PHNDALV+TL + NVK+HRIL+DGGSSAD++S   +K M L  ++LK 
Subjt:  GGPAGGGSSRKRKAIAREARSEPEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLKP

Query:  SLTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQKESRECYWTALK
        S   L+GFG ERV PEG  +L VTFG G  ++TKM++FLVVD  S+YNAILGR T+H +KAI STYHQ +KFPT   V  +KGEQ+ SRECY+T+++
Subjt:  SLTSLVGFGGERVTPEGSTKLPVTFGDGQNAMTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQKESRECYWTALK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTAGAGGAGTTGCTCAAGTCAAAGAAGACGAAACGAGAGCACAAGAGGTCTTCTTCATCTAACTACGACAGTAAGAAGGACAAAAGCAGCGGACCGACGAGAAA
GGTCGAGGCCGAGCATACCATGGCCGAGGCCGAGCCGACCATGACCATGGCCGAGGCTGAGCACATCCTATGTTCGTCGGTGAGCCTAGGGCCGAGCCTGACCAAAGATG
ACCGAGACAAAGAAGAACCCCTACGAGAGATCAAAACCATCTTTGGAGGACCAGCTGGAGGAGGTTCGAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGATCCGAA
CCAGAATATCGAGGTATGTACTCTGTCCGCCTAGCAAAGGCACACCCCTCTTTGGAGTTCACTGAGGCTGAGGCAGCAAACATTCATCAGCCACATAATGATGCCCTAGT
GGTCACTCTGGTTGTAGTCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAGCGGCCTTTAAAGCAATGCAGTTAGAGAGGG
AACTCTTAAAGCCAAGCCTTACCTCACTTGTAGGATTCGGAGGAGAGAGAGTGACCCCAGAAGGTAGCACAAAACTTCCTGTGACCTTTGGGGATGGACAGAATGCAATG
ACAAAGATGATAAACTTCCTAGTTGTGGATTGTATGTCAGCCTACAATGCAATCCTAGGAAGGCCAACCTTGCATGAAATGAAGGCCATAGCTTCAACTTACCATCAGTT
GCTGAAGTTTCCAACTCCGAATAATGTGAGAATTGTCAAAGGAGAGCAGAAGGAATCACGAGAATGTTACTGGACCGCGCTGAAAGCAGTTAAGCCACAGAAGCCCGAGG
CTGACCAGGCCAAGGCCGACCAGAGGATAGACCGAGGCCGAGCAGCACACACCTCCACCAACACTGAATCTGAACTTATGGAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTAGAGGAGTTGCTCAAGTCAAAGAAGACGAAACGAGAGCACAAGAGGTCTTCTTCATCTAACTACGACAGTAAGAAGGACAAAAGCAGCGGACCGACGAGAAA
GGTCGAGGCCGAGCATACCATGGCCGAGGCCGAGCCGACCATGACCATGGCCGAGGCTGAGCACATCCTATGTTCGTCGGTGAGCCTAGGGCCGAGCCTGACCAAAGATG
ACCGAGACAAAGAAGAACCCCTACGAGAGATCAAAACCATCTTTGGAGGACCAGCTGGAGGAGGTTCGAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGATCCGAA
CCAGAATATCGAGGTATGTACTCTGTCCGCCTAGCAAAGGCACACCCCTCTTTGGAGTTCACTGAGGCTGAGGCAGCAAACATTCATCAGCCACATAATGATGCCCTAGT
GGTCACTCTGGTTGTAGTCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAGCGGCCTTTAAAGCAATGCAGTTAGAGAGGG
AACTCTTAAAGCCAAGCCTTACCTCACTTGTAGGATTCGGAGGAGAGAGAGTGACCCCAGAAGGTAGCACAAAACTTCCTGTGACCTTTGGGGATGGACAGAATGCAATG
ACAAAGATGATAAACTTCCTAGTTGTGGATTGTATGTCAGCCTACAATGCAATCCTAGGAAGGCCAACCTTGCATGAAATGAAGGCCATAGCTTCAACTTACCATCAGTT
GCTGAAGTTTCCAACTCCGAATAATGTGAGAATTGTCAAAGGAGAGCAGAAGGAATCACGAGAATGTTACTGGACCGCGCTGAAAGCAGTTAAGCCACAGAAGCCCGAGG
CTGACCAGGCCAAGGCCGACCAGAGGATAGACCGAGGCCGAGCAGCACACACCTCCACCAACACTGAATCTGAACTTATGGAGTTTTAG
Protein sequenceShow/hide protein sequence
MSVEELLKSKKTKREHKRSSSSNYDSKKDKSSGPTRKVEAEHTMAEAEPTMTMAEAEHILCSSVSLGPSLTKDDRDKEEPLREIKTIFGGPAGGGSSRKRKAIAREARSE
PEYRGMYSVRLAKAHPSLEFTEAEAANIHQPHNDALVVTLVVVNVKIHRILIDGGSSADVLSLAAFKAMQLERELLKPSLTSLVGFGGERVTPEGSTKLPVTFGDGQNAM
TKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNNVRIVKGEQKESRECYWTALKAVKPQKPEADQAKADQRIDRGRAAHTSTNTESELMEF