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Lag0021431 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021431
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr7:7638542..7639274
RNA-Seq ExpressionLag0021431
SyntenyLag0021431
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3472633.1 reverse transcriptase [Gossypium australe]7.3e-0436.92Show/hide
Query:  EEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR
        +EI VE D+L +I+ +N+ +++ + I NL++ I+G  P+    SF+H PR  N  AH + RE  +
Subjt:  EEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR

KAA3474504.1 reverse transcriptase [Gossypium australe]1.1e-0443.75Show/hide
Query:  EIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR
        EI VE D+L +I  +N+E E+ + I +L++ I+G  P+  VLSF+H PR  N VAH +  E K+
Subjt:  EIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR

MBA0847404.1 hypothetical protein [Gossypium schwendimanii]3.3e-0443.55Show/hide
Query:  EEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRE
        ++I +E DAL +I+ LN+ DE+ + I NL++ IKG       LSFKH P+  N VAH++ +E
Subjt:  EEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRE

TYH08087.1 hypothetical protein ES288_A08G287600v1 [Gossypium darwinii]1.5e-0443.08Show/hide
Query:  EEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR
        ++I VE DAL +I  +N+ +EN + I N+++ IKG  P+   LSFK+ PR  N  AH +V E +R
Subjt:  EEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR

TYI16890.1 hypothetical protein ES332_A08G286100v1 [Gossypium tomentosum]1.5e-0443.08Show/hide
Query:  EEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR
        ++I VE DAL +I  +N+ +EN + I N+++ IKG  P+   LSFK+ PR  N  AH +V E +R
Subjt:  EEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR

TrEMBL top hitse value%identityAlignment
A0A5B6VU56 Reverse transcriptase3.5e-0436.92Show/hide
Query:  EEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR
        +EI VE D+L +I+ +N+ +++ + I NL++ I+G  P+    SF+H PR  N  AH + RE  +
Subjt:  EEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR

A0A5B6VZV7 Reverse transcriptase5.5e-0543.75Show/hide
Query:  EIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR
        EI VE D+L +I  +N+E E+ + I +L++ I+G  P+  VLSF+H PR  N VAH +  E K+
Subjt:  EIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR

A0A5D2FPQ0 RNase H domain-containing protein7.2e-0543.08Show/hide
Query:  EEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR
        ++I VE DAL +I  +N+ +EN + I N+++ IKG  P+   LSFK+ PR  N  AH +V E +R
Subjt:  EEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR

A0A5D2PPR1 Uncharacterized protein7.2e-0543.08Show/hide
Query:  EEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR
        ++I VE DAL +I  +N+ +EN + I N+++ IKG  P+   LSFK+ PR  N  AH +V E +R
Subjt:  EEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR

A0A7J9KLW0 RNase H domain-containing protein1.6e-0443.55Show/hide
Query:  EEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRE
        ++I +E DAL +I+ LN+ DE+ + I NL++ IKG       LSFKH P+  N VAH++ +E
Subjt:  EEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGAGGGACTCAAATTCATGCACGAAAATTTCGAAGATGTGGAGGAGATTGAAGTCGAATCGGATGCCCTTGATCTCATCCAATTCTTGAACAACGAAGACGAAAA
TATGACTGAGATCAAGAATTTAGTTGAAGCCATCAAAGGTTTGGCTCCCAGGATTGGAGTGCTGTCTTTCAAGCACTGCCCTCGAACTCAGAATGGGGTGGCTCACTCCC
TTGTTCGTGAAAGCAAAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGGAGGGACTCAAATTCATGCACGAAAATTTCGAAGATGTGGAGGAGATTGAAGTCGAATCGGATGCCCTTGATCTCATCCAATTCTTGAACAACGAAGACGAAAA
TATGACTGAGATCAAGAATTTAGTTGAAGCCATCAAAGGTTTGGCTCCCAGGATTGGAGTGCTGTCTTTCAAGCACTGCCCTCGAACTCAGAATGGGGTGGCTCACTCCC
TTGTTCGTGAAAGCAAAAGATAG
Protein sequenceShow/hide protein sequence
MWEGLKFMHENFEDVEEIEVESDALDLIQFLNNEDENMTEIKNLVEAIKGLAPRIGVLSFKHCPRTQNGVAHSLVRESKR