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Lag0021453 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021453
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr7:7894145..7894573
RNA-Seq ExpressionLag0021453
SyntenyLag0021453
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG47194.1 hypothetical protein EZV62_026488 [Acer yangbiense]7.1e-1037.1Show/hide
Query:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS
        +NTDAA +     +G+GVV+R+ +G ++  S  +     SP+ AEA A++EG R A+        + SD+L VV  I    +L S +  V+ DI+     
Subjt:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS

Query:  FHRISFVHVNRLFNRPVSHDLAKI
        F+  SF HV RL N+ V+H LAK+
Subjt:  FHRISFVHVNRLFNRPVSHDLAKI

XP_018835621.1 uncharacterized protein LOC109002366 [Juglans regia]3.2e-1032.52Show/hide
Query:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS
        +N D A    + K+G+G++LRD++G ++A  S       SP   EA A++ G +F  ++ V ++ + +D L +VNA++ + N  +    +L DI  ++  
Subjt:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS

Query:  FHRISFVHVNRLFNRPVSHDLAK
        F  +  +HVNRL N  V+H LA+
Subjt:  FHRISFVHVNRLFNRPVSHDLAK

XP_023870487.1 uncharacterized protein LOC111983062 [Quercus suber]6.0e-0933.33Show/hide
Query:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS
        MN D A     + +G+GV++RD+QG ++A  S   N  +  +  EA A+    +FA    V+   +  DSL V NA+ G  +  SS+ +V+   +     
Subjt:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS

Query:  FHRISFVHVNRLFNRPVSHDLAK
        F R+ F H+ R  N+P +H LAK
Subjt:  FHRISFVHVNRLFNRPVSHDLAK

XP_023897130.1 uncharacterized protein LOC112009010 [Quercus suber]2.1e-0936.21Show/hide
Query:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS
        +N D A     + +G+GV++RD  G ++A  S   N  +  +  EA AI  G  FAR   +H   +  DSL V NA+RG     S I  V+W I+     
Subjt:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS

Query:  FHRISFVHVNRLFNRP
          RI F HV    NRP
Subjt:  FHRISFVHVNRLFNRP

XP_042962749.1 uncharacterized protein LOC122297028 [Carya illinoinensis]4.6e-0934.15Show/hide
Query:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS
        MN D A  G   K+G+G+VLRD +G++L   S   +   +    EA A++ G +F  ++ ++++ + SD L ++N +       S    V+ +I  + S 
Subjt:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS

Query:  FHRISFVHVNRLFNRPVSHDLAK
        FH ISFVHV R  N  V+H LA+
Subjt:  FHRISFVHVNRLFNRPVSHDLAK

TrEMBL top hitse value%identityAlignment
A0A2I4DWF6 uncharacterized protein LOC1089841071.4e-0834.43Show/hide
Query:  NTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISSF
        N DAA D +N + G+GV++R+ +G+++A   SS ++ + P+  EA A      F     +  + +  DSL VV AI+ + +  S    V+ DI  L+S F
Subjt:  NTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISSF

Query:  HRISFVHVNRLFNRPVSHDLAK
           S +HV+R  N  ++H LAK
Subjt:  HRISFVHVNRLFNRPVSHDLAK

A0A2I4FVF0 uncharacterized protein LOC1090023661.5e-1032.52Show/hide
Query:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS
        +N D A    + K+G+G++LRD++G ++A  S       SP   EA A++ G +F  ++ V ++ + +D L +VNA++ + N  +    +L DI  ++  
Subjt:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS

Query:  FHRISFVHVNRLFNRPVSHDLAK
        F  +  +HVNRL N  V+H LA+
Subjt:  FHRISFVHVNRLFNRPVSHDLAK

A0A5C7GQX3 RNase H domain-containing protein3.4e-1037.1Show/hide
Query:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS
        +NTDAA +     +G+GVV+R+ +G ++  S  +     SP+ AEA A++EG R A+        + SD+L VV  I    +L S +  V+ DI+     
Subjt:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS

Query:  FHRISFVHVNRLFNRPVSHDLAKI
        F+  SF HV RL N+ V+H LAK+
Subjt:  FHRISFVHVNRLFNRPVSHDLAKI

A0A7N2L0F1 Uncharacterized protein1.4e-0836.44Show/hide
Query:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS
        +N D A     RKSG+GVV+ + +G  +   S   N  +  + AEA A   G  FA+    H + +  DS+ V NAI G     SSI +V++ I SL+S+
Subjt:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS

Query:  FHRISFVHVNRLFNRPVS
        FH+ S  HV+R  N+ ++
Subjt:  FHRISFVHVNRLFNRPVS

A0A7N2MTJ9 Uncharacterized protein1.4e-0834.15Show/hide
Query:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS
        +N D A     +  G+GV++RD++G L A  S      +  + AEA A  +G  FAR   +H   +  DSL + +A+    N  SS+  V+  I  +   
Subjt:  MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISS

Query:  FHRISFVHVNRLFNRPVSHDLAK
        FH + F HV R  N+P +H LAK
Subjt:  FHRISFVHVNRLFNRPVSHDLAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACGGATGCAGCTTACGACGGGATAAATCGTAAATCTGGTCTTGGAGTTGTGCTCAGAGATAAGCAAGGATCTTTGTTAGCATTGTCATCTTCGTCTTCCAATAT
TTGTGTCTCGCCAATTTGTGCGGAAGCGGCGGCTATTATGGAAGGCTTTCGCTTTGCTCGACGATTTAATGTTCATCGCATGACGGTTATGTCTGATTCTCTAGCCGTAG
TTAACGCTATAAGGGGTGAGGGGAATTTGGACTCGAGTATAGTTACTGTTCTGTGGGATATTATTAGTCTAATTTCTTCCTTCCATAGGATAAGTTTCGTGCATGTCAAT
CGTCTTTTTAATAGACCGGTCTCTCATGATTTGGCGAAAATTGGGCCTTTATATACTCTAGTTCACAAGAGTGGACTTCGAATTTTCCAGATTGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATACGGATGCAGCTTACGACGGGATAAATCGTAAATCTGGTCTTGGAGTTGTGCTCAGAGATAAGCAAGGATCTTTGTTAGCATTGTCATCTTCGTCTTCCAATAT
TTGTGTCTCGCCAATTTGTGCGGAAGCGGCGGCTATTATGGAAGGCTTTCGCTTTGCTCGACGATTTAATGTTCATCGCATGACGGTTATGTCTGATTCTCTAGCCGTAG
TTAACGCTATAAGGGGTGAGGGGAATTTGGACTCGAGTATAGTTACTGTTCTGTGGGATATTATTAGTCTAATTTCTTCCTTCCATAGGATAAGTTTCGTGCATGTCAAT
CGTCTTTTTAATAGACCGGTCTCTCATGATTTGGCGAAAATTGGGCCTTTATATACTCTAGTTCACAAGAGTGGACTTCGAATTTTCCAGATTGGCTAG
Protein sequenceShow/hide protein sequence
MNTDAAYDGINRKSGLGVVLRDKQGSLLALSSSSSNICVSPICAEAAAIMEGFRFARRFNVHRMTVMSDSLAVVNAIRGEGNLDSSIVTVLWDIISLISSFHRISFVHVN
RLFNRPVSHDLAKIGPLYTLVHKSGLRIFQIG