CuGenDBv2

Gene ID	Lag0021470
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	seipin-1
Genome location	chr7:8090973..8094391
RNA-Seq Expression	Lag0021470
Synteny	Lag0021470
Gene Ontology terms	GO:0006629 - lipid metabolic process (biological process) GO:0048316 - seed development (biological process) GO:0140042 - lipid droplet formation (biological process) GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component)
InterPro domains	IPR009617 - Seipin family

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6588277.1 Seipin-1, partial [Cucurbita argyrosperma subsp. sororia]

3.2e-45

71.03

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Query:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS
        LISESF RAEEAKSTVE AVRKSPSAVAHR+ L VRR+SY LVAA FMC+VM+LLL  A  V A+AIR WI+EPV  R  L+FDYT ARPRAL+GVDY  
Subjt:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS

Query:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML
          K KK KNLGIPVGHTFSV V+LLMPE +FNR VGVFQ+  +++
Subjt:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML

KAG7022197.1 Seipin-1, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.2e-45

71.03

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Query:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS
        LISESF RAEEAKSTVE AVRKSPSAVAHR+ L VRR+SY LVAA FMC+VM+LLL  A  V A+AIR WI+EPV  R  L+FDYT ARPRAL+GVDY  
Subjt:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS

Query:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML
          K KK KNLGIPVGHTFSV V+LLMPE +FNR VGVFQ+  +++
Subjt:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML

XP_022933775.1 seipin-1 [Cucurbita moschata]

1.9e-45

71.03

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Query:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS
        LISESF RAEEAKSTVE AVRKSPSAVAHR+ L VRR+SY LVAA FMC+VM+LLL  A  V A+AIR WI+EPV  R  L+FDYT ARPRAL+GVDY  
Subjt:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS

Query:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML
          K KK KNLGIPVGHTFSV V+LLMPE +FNR VGVFQ+  +++
Subjt:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML

XP_023005649.1 seipin-1 [Cucurbita maxima]

4.2e-45

70.34

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Query:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS
        LISESFHRAEEAKSTVE AVRKSPSAVA+R+ L VRR+SY LVAA FMC+VM LLL  A  V A+AIR WI+EPV  +  L+FDYT ARPRAL+GVDY  
Subjt:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS

Query:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML
          K KK KNLGIPVGHTFSV V+LLMPE +FNR VGVFQ+  +++
Subjt:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML

XP_023520654.1 seipin-1 [Cucurbita pepo subsp. pepo]

1.3e-46

71.03

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Query:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS
        LISESFHRAEEAKSTVE AVRKSPSAVAHR+ L VRR+SY LVAA FMC++M+LLL  A  V A+AIR WI+EPV  R  L+FDYT ARPRAL+GVDY  
Subjt:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS

Query:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML
          K+KK KNLGIPVGHTFSV V+LLMPE +FNR VGVFQ+  +++
Subjt:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML

TrEMBL top hits

e value

%identity

Alignment

A0A0A0M367 Uncharacterized protein

4.0e-41

66.9

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Query:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS
        L +ESF RAEE K TVESAVRKSPS VA R+ +  RRMSY  VAA  MC+VM+LLLV A GV  L IR WI+EPV ++EKL FDYTEARPRALFG   G+
Subjt:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS

Query:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML
          K+ KKKNLGIPVGHTF V VVLLMPE +FNRE GVFQ+  +++
Subjt:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML

A0A1S3B8L6 seipin-1

4.0e-41

66.21

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Query:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS
        L +ESF RAEE K TVESAVRKSPS VA R+ + VRR+SY  VAA  MC+VM+LLL+ A GV  L IR WI+EPV ++EKL FDYTEARPRALFG+  G+
Subjt:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS

Query:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML
          K+ KKKNLGIPVGHTF V VVLLMPE +FNRE GVFQ+  +++
Subjt:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML

A0A6J1D9G7 seipin-1

6.2e-34

55.86

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Query:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS
        L+SESF  AEEAK +VESAVR++PS  A R+ L  RR+SY L AA  +CV M++LL AA G  A A+R W++EPV +RE+L+FDYT+A+PRA+FG +   
Subjt:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS

Query:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML
             KK NLGIPVGH F+  V+LLMPE +FNR VGVFQ++ +++
Subjt:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML

A0A6J1F5S3 seipin-1

9.2e-46

71.03

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Query:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS
        LISESF RAEEAKSTVE AVRKSPSAVAHR+ L VRR+SY LVAA FMC+VM+LLL  A  V A+AIR WI+EPV  R  L+FDYT ARPRAL+GVDY  
Subjt:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS

Query:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML
          K KK KNLGIPVGHTFSV V+LLMPE +FNR VGVFQ+  +++
Subjt:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML

A0A6J1KZV1 seipin-1

2.0e-45

70.34

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Query:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS
        LISESFHRAEEAKSTVE AVRKSPSAVA+R+ L VRR+SY LVAA FMC+VM LLL  A  V A+AIR WI+EPV  +  L+FDYT ARPRAL+GVDY  
Subjt:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS

Query:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML
          K KK KNLGIPVGHTFSV V+LLMPE +FNR VGVFQ+  +++
Subjt:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML

SwissProt top hits

e value

%identity

Alignment

Q8L615 Seipin-3

4.0e-06

29.66

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Query:  VVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALF------GVDYGSATKIKKKKNLGIPVGHTFSVFVVLLMP
        +VRR+++ L  A ++ +++  LLV+A  +    I     EP+ ++E L+FDYT++ P A        GV +G + K   +      +     + V + +P
Subjt:  VVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALF------GVDYGSATKIKKKKNLGIPVGHTFSVFVVLLMP

Query:  EFEFNREVGVFQVKKKML
        E E+NR +G+FQV+   L
Subjt:  EFEFNREVGVFQVKKKML

Q9FFD9 Seipin-1

2.2e-20

39.31

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Query:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS
        L+  S+ RA    S  E AV+++P+ +A     VVRR  + ++ A  + +VM+L L+ A  +G   + L++++PV +R++L FDYTE  P A+F  D   
Subjt:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS

Query:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML
            KKK++  +PVGH+  V +VL MPE E NR +GVFQ+K ++L
Subjt:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML

Arabidopsis top hits

e value

%identity

Alignment

AT2G34380.1 Putative adipose-regulatory protein (Seipin)

2.9e-07

29.66

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Query:  VVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALF------GVDYGSATKIKKKKNLGIPVGHTFSVFVVLLMP
        +VRR+++ L  A ++ +++  LLV+A  +    I     EP+ ++E L+FDYT++ P A        GV +G + K   +      +     + V + +P
Subjt:  VVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALF------GVDYGSATKIKKKKNLGIPVGHTFSVFVVLLMP

Query:  EFEFNREVGVFQVKKKML
        E E+NR +G+FQV+   L
Subjt:  EFEFNREVGVFQVKKKML

AT5G16460.1 Putative adipose-regulatory protein (Seipin)

1.6e-21

39.31

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Query:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS
        L+  S+ RA    S  E AV+++P+ +A     VVRR  + ++ A  + +VM+L L+ A  +G   + L++++PV +R++L FDYTE  P A+F  D   
Subjt:  LISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAATFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGS

Query:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML
            KKK++  +PVGH+  V +VL MPE E NR +GVFQ+K ++L
Subjt:  ATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKML

Sequences

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CDS sequence

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ATGAATGGAATGGAATGGAATGTTGGGAAGCTTAGATTTTATGAGAGGAATTTGAAGAAGAGCGCAATTTCAGGGGCAGAGACTCCACCAGAGGAAATCATTATTGAATG
TGAGAAAAAGATGGCGTTGACAGACTCTGGTGTGTCTCTAGGAGATCTGATCCTCTGCAAACGGGTACAGGATAGGCGTGTTTCTACGATAGTACATACTACATCCATTC
AATATTTAACCGGTCATTTAATGAAAGGAGAGGGAAAGGGAGGAGGCTCTGGCGCTAGCGACGAGAGGGCTGAAACCGAGAGGGAGGAGGGCTTCCCTCCTCTCGTTTCA
TTTATCCGGAAAAGAAAAAAATCTCTCTGTTTCAAGACTCCCACAGTCCGCCATGGATTCCGACGAAGAGCTCGAACAATCCAACCGTCTAATCCCAAAACCGACCGATT
TCTTCAACAAAATCGTATTCCTCCAAGCCGATTTGATCCACAATGCCATTTCCTTCCTCTTCACTCCGATCTCCACTCTCCTCCCCTGATCTCGGAGTCATTCCATCGCG
CAGAAGAGGCGAAATCTACCGTCGAGTCCGCCGTCCGAAAATCTCCCTCTGCCGTCGCCCATCGGTTGAGCCTCGTCGTGAGAAGAATGAGCTACAGCCTTGTCGCGGCG
ACGTTCATGTGTGTCGTGATGCTCCTACTTCTGGTGGCGGCGACGGGAGTCGGCGCCCTGGCGATTCGGTTATGGATCAAAGAGCCGGTGGGTTTGAGGGAGAAACTGAG
CTTCGATTACACTGAGGCTCGCCCGAGGGCTTTGTTTGGAGTGGATTATGGGAGTGCGACAAAGATAAAAAAGAAGAAGAATTTGGGGATTCCGGTAGGGCACACGTTCT
CTGTATTTGTGGTTCTTCTGATGCCTGAATTTGAATTCAATCGCGAGGTTGGAGTTTTTCAGGTAAAGAAGAAAATGTTGAAGAAAATGTTGGAGAAGAAAGGGGAGAAA
GAAAGAAAAGGTTAA

mRNA sequence

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Protein sequence

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MNGMEWNVGKLRFYERNLKKSAISGAETPPEEIIIECEKKMALTDSGVSLGDLILCKRVQDRRVSTIVHTTSIQYLTGHLMKGEGKGGGSGASDERAETEREEGFPPLVS
FIRKRKKSLCFKTPTVRHGFRRRARTIQPSNPKTDRFLQQNRIPPSRFDPQCHFLPLHSDLHSPPLISESFHRAEEAKSTVESAVRKSPSAVAHRLSLVVRRMSYSLVAA
TFMCVVMLLLLVAATGVGALAIRLWIKEPVGLREKLSFDYTEARPRALFGVDYGSATKIKKKKNLGIPVGHTFSVFVVLLMPEFEFNREVGVFQVKKKMLKKMLEKKGEK
ERKG

Lag0021470 (gene) of Sponge gourd (AG-4) v1 genome