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Lag0021484 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021484
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein VTE6, chloroplastic
Genome locationchr7:8203966..8208828
RNA-Seq ExpressionLag0021484
SyntenyLag0021484
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR002794 - Protein of unknown function DUF92, TMEM19


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059051.1 protein VTE6 [Cucumis melo var. makuwa]4.8e-5290.16Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAF+QLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVT FKVVPRGTEGAVSLEGTFAGLLAAI LA  GCLLGDVTAPEAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

XP_004137222.1 protein VTE6, chloroplastic isoform X1 [Cucumis sativus]5.7e-5391.8Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVT FKVVPRGTEGAVSLEGTFAGLLAAIALA+VGCLLGDVTA EAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

XP_022142893.1 protein VTE6, chloroplastic isoform X1 [Momordica charantia]1.2e-5391.8Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAF QLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIAL++VGCLLGDVTAPEAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

XP_031740533.1 protein VTE6, chloroplastic isoform X2 [Cucumis sativus]5.7e-5391.8Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVT FKVVPRGTEGAVSLEGTFAGLLAAIALA+VGCLLGDVTA EAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

XP_038876750.1 protein VTE6, chloroplastic [Benincasa hispida]2.6e-5391.8Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALA+V CLLGDVTAPE IVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

TrEMBL top hitse value%identityAlignment
A0A0A0KVG7 Uncharacterized protein2.8e-5391.8Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVT FKVVPRGTEGAVSLEGTFAGLLAAIALA+VGCLLGDVTA EAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

A0A1S3BTA9 protein VTE6, chloroplastic2.3e-5290.16Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAF+QLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVT FKVVPRGTEGAVSLEGTFAGLLAAI LA  GCLLGDVTAPEAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

A0A5A7UZZ0 Protein VTE62.3e-5290.16Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAF+QLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVT FKVVPRGTEGAVSLEGTFAGLLAAI LA  GCLLGDVTAPEAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

A0A5D3CWL7 Protein VTE62.3e-5290.16Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAF+QLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVT FKVVPRGTEGAVSLEGTFAGLLAAI LA  GCLLGDVTAPEAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

A0A6J1CPE4 protein VTE6, chloroplastic isoform X15.6e-5491.8Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG
        +KVGGEAF QLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIAL++VGCLLGDVTAPEAIVCVIASQIANLG
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLG

Query:  ESIIGVVLQEKEGFQWISSTVI
        ESIIG VLQEKEGFQW+++ V+
Subjt:  ESIIGVVLQEKEGFQWISSTVI

SwissProt top hitse value%identityAlignment
P73555 Uncharacterized membrane protein sll08759.2e-2252.63Show/hide
Query:  QLW-RLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVL
        QLW  LG+VASF TKLSDT +SE+GKAYG+ T+L+TT + VPRGTEGAVS+EGT AG  A +ALA +G  +G ++    I   +A+ IA   ES+IG  L
Subjt:  QLW-RLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVL

Query:  QEKEGFQWISSTVI
        Q K  + W+++ V+
Subjt:  QEKEGFQWISSTVI

Q58343 Uncharacterized membrane protein MJ09336.2e-1039Show/hide
Query:  LGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLL-GDVTAPEAIVCVIASQIA-NLGESIIGVVLQEK
        +G+++S     SDT SSE+G        L+TTF+VV +GT+GA+++ GT AG+L A  +   G LL GD+   + ++C  A  IA NL +S++G + + K
Subjt:  LGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLL-GDVTAPEAIVCVIASQIA-NLGESIIGVVLQEK

Q9SYM0 Protein VTE6, chloroplastic1.3e-4473.55Show/hide
Query:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLGE
        +VGG AF+QL+RLGFV+SFCTK+SDTVSSEIGKAYG+ TYL TTFK+VPRGTEGA+SLEGT AGLLA+  LA VGC LG +T PEA VCV+ASQIANLGE
Subjt:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLGE

Query:  SIIGVVLQEKEGFQWISSTVI
        SIIG   Q+KEGF+W+++ V+
Subjt:  SIIGVVLQEKEGFQWISSTVI

Arabidopsis top hitse value%identityAlignment
AT1G78620.1 Protein of unknown function DUF92, transmembrane9.4e-4673.55Show/hide
Query:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLGE
        +VGG AF+QL+RLGFV+SFCTK+SDTVSSEIGKAYG+ TYL TTFK+VPRGTEGA+SLEGT AGLLA+  LA VGC LG +T PEA VCV+ASQIANLGE
Subjt:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLGE

Query:  SIIGVVLQEKEGFQWISSTVI
        SIIG   Q+KEGF+W+++ V+
Subjt:  SIIGVVLQEKEGFQWISSTVI

AT1G78620.2 Protein of unknown function DUF92, transmembrane9.4e-4673.55Show/hide
Query:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLGE
        +VGG AF+QL+RLGFV+SFCTK+SDTVSSEIGKAYG+ TYL TTFK+VPRGTEGA+SLEGT AGLLA+  LA VGC LG +T PEA VCV+ASQIANLGE
Subjt:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLGE

Query:  SIIGVVLQEKEGFQWISSTVI
        SIIG   Q+KEGF+W+++ V+
Subjt:  SIIGVVLQEKEGFQWISSTVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGAGAAAGCTCAGGAAGATGAAGAAACTTCGGACTTCTGTGAAGAAATTGAAAGGAGAGTGCAGACGGTTGAGGATAGAGCCAACGCTGTTGCTCCTTTCTTC
TTCTCTCAGCCGCCACAGCTCCCTTCACCAATCTTCTTCAACAACCGCCGGTGCCTTGGATTTTTCGTCTTCCTTCGCCGCATATTCGTATCTTCTTCAACGTTCGACTG
TTTGGACTCTTCGCCGCAGATTCCTCTCTTCCCGAAGGCGGCGACTGGACGACAGTGGTAAGGCGGCACCAAACCTCGTTCGGCTGTTCCGACTCGTTTGCAAGGCGGCG
ACTGGTAAGGCGGCACCAAACCTCAGCGACGGAGCAAGGCGGCGACTGGCAGCGTGGGTTTCGTCCGAAGGCGGCGACCGGACCAAAAATATCCGACTCGTTGCATTTCA
ACCTCAGCAAGGCGCCGACTGGACCAAAAAAAGTATTCATTCCAAAGTTGGGGGAGAAGCATTCGCGCAACTCTGGCGACTTGGTTTTGTTGCCAGTTTTTGTACTAAAC
TGAGTGATACTGTCTCAAGTGAAATAGGGAAGGCGTATGGTAGAATAACGTACCTGGTGACAACATTTAAGGTTGTTCCTCGGGGAACAGAAGGGGCTGTCAGTCTCGAG
GGAACCTTTGCTGGACTCTTAGCAGCAATCGCTCTTGCATACGTTGGCTGTCTTTTGGGTGATGTAACTGCACCTGAAGCAATTGTATGTGTTATAGCTTCACAGATTGC
TAATCTTGGTGAAAGCATCATCGGTGTTGTCCTTCAAGAGAAGGAGGGATTTCAGTGGATTTCTTCAACTGTTATTGCCTGCTCTTATGTATCATCGTCGCTTTATTCGT
CAAGAACGATGAGTTTGACTCTGAAAGTAGCTTGGCTAATAGCCTTGATTGGTTTAAATCTTAAGGCAACTGCAAAATTAGTAGGTAATCCATATTGGTCATTACCAGCT
TCAGATGACACAGAGGAATATTTGAAGTCTAGTTGTGAACCTGAAGTGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGAGAAAGCTCAGGAAGATGAAGAAACTTCGGACTTCTGTGAAGAAATTGAAAGGAGAGTGCAGACGGTTGAGGATAGAGCCAACGCTGTTGCTCCTTTCTTC
TTCTCTCAGCCGCCACAGCTCCCTTCACCAATCTTCTTCAACAACCGCCGGTGCCTTGGATTTTTCGTCTTCCTTCGCCGCATATTCGTATCTTCTTCAACGTTCGACTG
TTTGGACTCTTCGCCGCAGATTCCTCTCTTCCCGAAGGCGGCGACTGGACGACAGTGGTAAGGCGGCACCAAACCTCGTTCGGCTGTTCCGACTCGTTTGCAAGGCGGCG
ACTGGTAAGGCGGCACCAAACCTCAGCGACGGAGCAAGGCGGCGACTGGCAGCGTGGGTTTCGTCCGAAGGCGGCGACCGGACCAAAAATATCCGACTCGTTGCATTTCA
ACCTCAGCAAGGCGCCGACTGGACCAAAAAAAGTATTCATTCCAAAGTTGGGGGAGAAGCATTCGCGCAACTCTGGCGACTTGGTTTTGTTGCCAGTTTTTGTACTAAAC
TGAGTGATACTGTCTCAAGTGAAATAGGGAAGGCGTATGGTAGAATAACGTACCTGGTGACAACATTTAAGGTTGTTCCTCGGGGAACAGAAGGGGCTGTCAGTCTCGAG
GGAACCTTTGCTGGACTCTTAGCAGCAATCGCTCTTGCATACGTTGGCTGTCTTTTGGGTGATGTAACTGCACCTGAAGCAATTGTATGTGTTATAGCTTCACAGATTGC
TAATCTTGGTGAAAGCATCATCGGTGTTGTCCTTCAAGAGAAGGAGGGATTTCAGTGGATTTCTTCAACTGTTATTGCCTGCTCTTATGTATCATCGTCGCTTTATTCGT
CAAGAACGATGAGTTTGACTCTGAAAGTAGCTTGGCTAATAGCCTTGATTGGTTTAAATCTTAAGGCAACTGCAAAATTAGTAGGTAATCCATATTGGTCATTACCAGCT
TCAGATGACACAGAGGAATATTTGAAGTCTAGTTGTGAACCTGAAGTGTTGTGA
Protein sequenceShow/hide protein sequence
MEKRKLRKMKKLRTSVKKLKGECRRLRIEPTLLLLSSSLSRHSSLHQSSSTTAGALDFSSSFAAYSYLLQRSTVWTLRRRFLSSRRRRLDDSGKAAPNLVRLFRLVCKAA
TGKAAPNLSDGARRRLAAWVSSEGGDRTKNIRLVAFQPQQGADWTKKSIHSKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLE
GTFAGLLAAIALAYVGCLLGDVTAPEAIVCVIASQIANLGESIIGVVLQEKEGFQWISSTVIACSYVSSSLYSSRTMSLTLKVAWLIALIGLNLKATAKLVGNPYWSLPA
SDDTEEYLKSSCEPEVL