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Lag0021496 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021496
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionER membrane protein complex subunit 6
Genome locationchr7:8328146..8332354
RNA-Seq ExpressionLag0021496
SyntenyLag0021496
Gene Ontology termsGO:0000045 - autophagosome assembly (biological process)
GO:0072546 - ER membrane protein complex (cellular component)
InterPro domainsIPR008504 - ER membrane protein complex subunit 6
IPR029008 - Rab5-interacting protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597582.1 ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia]3.2e-4590.99Show/hide
Query:  DHTPAEAMAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQI
        D TP EAMAGYSS AS+KKSSDA DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFIFYFLVMAITSIGLAAKA FSFHSYFESW QI
Subjt:  DHTPAEAMAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQI

Query:  LLDGFLSGLMS
        LLDGFLSGLMS
Subjt:  LLDGFLSGLMS

KAG7029026.1 ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. argyrosperma]9.2e-4590.91Show/hide
Query:  DHTPAEAMAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQI
        D TP EAMAGYSS AS+KKSSDA DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFIFYFLVMAITSIGLAAKA FSFHSYFESW QI
Subjt:  DHTPAEAMAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQI

Query:  LLDGFLSGLM
        LLDGFLSGLM
Subjt:  LLDGFLSGLM

XP_022137968.1 ER membrane protein complex subunit 6 [Momordica charantia]2.5e-4291.35Show/hide
Query:  MAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLS
        MAGYSS AS+KKS++AADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFI YFLVMAITS+GLAAKA FSFHSYFESW QILLDGFLS
Subjt:  MAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLS

Query:  GLMS
        GLMS
Subjt:  GLMS

XP_022972030.1 ER membrane protein complex subunit 6 [Cucurbita maxima]1.5e-4293.27Show/hide
Query:  MAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLS
        MAGYSS AS+KKSSDA DDLPI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFIFYFLVMAITSIGLAAKA FSFHSYFESW QILLDGFLS
Subjt:  MAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLS

Query:  GLMS
        GLMS
Subjt:  GLMS

XP_038880512.1 ER membrane protein complex subunit 6 [Benincasa hispida]8.6e-4383.19Show/hide
Query:  LLAAEDPVDHTPAEAMAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHS
        LL  E+   +T AE  AGYSST S+KKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGL GFIFYF+VMAITS+ LA KA FSF S
Subjt:  LLAAEDPVDHTPAEAMAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHS

Query:  YFESWTQILLDGFLSGLMS
        YFESW QILLDGFLSGLMS
Subjt:  YFESWTQILLDGFLSGLMS

TrEMBL top hitse value%identityAlignment
A0A0A0LZ06 ER membrane protein complex subunit 64.6e-4291.35Show/hide
Query:  MAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLS
        MAGYSSTASDKKSSD ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTGFIFYFLVMAITS+ LAAKA FSFHSYFES  QIL DGFLS
Subjt:  MAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLS

Query:  GLMS
        GLMS
Subjt:  GLMS

A0A1S3BQB0 ER membrane protein complex subunit 62.1e-4292.31Show/hide
Query:  MAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLS
        MAGYSSTASDKKSSD+ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITS+ LAAKA FSFHSYFES  QILLDGFL 
Subjt:  MAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLS

Query:  GLMS
        GLMS
Subjt:  GLMS

A0A6J1CBS9 ER membrane protein complex subunit 61.2e-4291.35Show/hide
Query:  MAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLS
        MAGYSS AS+KKS++AADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFI YFLVMAITS+GLAAKA FSFHSYFESW QILLDGFLS
Subjt:  MAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLS

Query:  GLMS
        GLMS
Subjt:  GLMS

A0A6J1FFH8 ER membrane protein complex subunit 61.2e-4292.31Show/hide
Query:  MAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLS
        MAGYSS AS+KKSSDA DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFIFYFLVMAITSIGLAAKA FSFHSYFESW QILLDGFLS
Subjt:  MAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLS

Query:  GLMS
        GLMS
Subjt:  GLMS

A0A6J1I7D9 ER membrane protein complex subunit 67.1e-4393.27Show/hide
Query:  MAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLS
        MAGYSS AS+KKSSDA DDLPI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFIFYFLVMAITSIGLAAKA FSFHSYFESW QILLDGFLS
Subjt:  MAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLS

Query:  GLMS
        GLMS
Subjt:  GLMS

SwissProt top hitse value%identityAlignment
Q3ZCG8 ER membrane protein complex subunit 67.9e-0736.9Show/hide
Query:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLSGLMS
        P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + S+ L  KA   ++ YF+S   +   G + GL +
Subjt:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLSGLMS

Q68EU8 ER membrane protein complex subunit 63.9e-0637.66Show/hide
Query:  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLSGLMS
        ++ N  ++ Y RT +S + G  AGILG T L GFIFYFL   + S+ L  K+   ++ YF+S   +   G + GL +
Subjt:  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLSGLMS

Q6GLC5 ER membrane protein complex subunit 63.0e-0637.66Show/hide
Query:  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLSGLMS
        ++ N  ++ Y RT +S + G  AGILG T L GFIFYFL   + S+ L  K+   ++ YF+S   +   G + GL +
Subjt:  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLSGLMS

Q9BV81 ER membrane protein complex subunit 64.6e-0736.9Show/hide
Query:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLSGLMS
        P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + S+ L  KA   ++ YF+S   +   G + GL +
Subjt:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLSGLMS

Q9CQW0 ER membrane protein complex subunit 64.6e-0736.9Show/hide
Query:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLSGLMS
        P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + S+ L  KA   ++ YF+S   +   G + GL +
Subjt:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLSGLMS

Arabidopsis top hitse value%identityAlignment
AT5G49540.1 Rab5-interacting family protein6.8e-3065.98Show/hide
Query:  ASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLSGLMS
        +S+K+S D   D+P F+AENLQNNLK+I  SRTFLSII GV+AGI+GF GL GF+FYF+VM ITS+GL AKA FS   YF+SW ++L DGFL GLMS
Subjt:  ASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLSGLMS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCCAACTGGGGGGCTCAACTCAACTACAAGATTCAGCTGCCGCTTCGTCGAGTAGAACAATCCGTTTTTGCATTTTTCCTTCTCTGTTTCATAGATTTCGGTCT
ATTAGCTGCAGAAGATCCGGTAGATCATACACCAGCAGAAGCTATGGCTGGATATTCCTCCACTGCTTCTGACAAGAAATCGTCTGACGCGGCCGACGATTTACCGATCT
TCAATGCTGAAAATTTGCAAAACAACTTGAAGATTATATATTACAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAATTTTGGGATTCACAGGCCTGACT
GGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCAATTGGACTTGCAGCCAAGGCTGCATTCTCCTTTCATTCGTATTTCGAAAGCTGGACCCAGATTCTACTTGA
TGGCTTTCTGAGTGGTCTCATGTCGACTTCTCTACATGGCCATGGATTGCAATCTAATCGAAGACTTTTGGTTTGGTTGCTGAGAAGATTGCGTGGAGGTTGGAGAGATT
TTAGTAATTTTCTTTGGGGGGGTTCAGGGAAGGTCGAAAATGGAAGCATTTTGCAAGATGGTATGAGAAGTAAATATGATGTGGATTGCTTTGGATGGTATTTGAAGGAA
TCCATAAGATGTAGCATGGACATCAATAGTGTCTTTCAAATCCTTGGTGGGAGCGTTAGGCGTCTCAAAACTGGGAAATGGGAGGAGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCCAACTGGGGGGCTCAACTCAACTACAAGATTCAGCTGCCGCTTCGTCGAGTAGAACAATCCGTTTTTGCATTTTTCCTTCTCTGTTTCATAGATTTCGGTCT
ATTAGCTGCAGAAGATCCGGTAGATCATACACCAGCAGAAGCTATGGCTGGATATTCCTCCACTGCTTCTGACAAGAAATCGTCTGACGCGGCCGACGATTTACCGATCT
TCAATGCTGAAAATTTGCAAAACAACTTGAAGATTATATATTACAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAATTTTGGGATTCACAGGCCTGACT
GGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCAATTGGACTTGCAGCCAAGGCTGCATTCTCCTTTCATTCGTATTTCGAAAGCTGGACCCAGATTCTACTTGA
TGGCTTTCTGAGTGGTCTCATGTCGACTTCTCTACATGGCCATGGATTGCAATCTAATCGAAGACTTTTGGTTTGGTTGCTGAGAAGATTGCGTGGAGGTTGGAGAGATT
TTAGTAATTTTCTTTGGGGGGGTTCAGGGAAGGTCGAAAATGGAAGCATTTTGCAAGATGGTATGAGAAGTAAATATGATGTGGATTGCTTTGGATGGTATTTGAAGGAA
TCCATAAGATGTAGCATGGACATCAATAGTGTCTTTCAAATCCTTGGTGGGAGCGTTAGGCGTCTCAAAACTGGGAAATGGGAGGAGAATTAA
Protein sequenceShow/hide protein sequence
MKANWGAQLNYKIQLPLRRVEQSVFAFFLLCFIDFGLLAAEDPVDHTPAEAMAGYSSTASDKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLT
GFIFYFLVMAITSIGLAAKAAFSFHSYFESWTQILLDGFLSGLMSTSLHGHGLQSNRRLLVWLLRRLRGGWRDFSNFLWGGSGKVENGSILQDGMRSKYDVDCFGWYLKE
SIRCSMDINSVFQILGGSVRRLKTGKWEEN