; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0021512 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021512
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr7:8548272..8550053
RNA-Seq ExpressionLag0021512
SyntenyLag0021512
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW30353.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.6e-3728.45Show/hide
Query:  ITEVHSRNVNSLINSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIM
        I E+ +     L N+E I +E +++++  YT      +    LDW PI+ + A  L+  FT++++  A+  L   K+PG  GFT    +  W  +K D++
Subjt:  ITEVHSRNVNSLINSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIM

Query:  SMVEAFFHFGIINKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTLWMQCYTLKDFV---------KDGGNGF-
         +   F   GIIN+  N ++I LIPKK  +K ++D+RPISLI   YKIIA++LS RL+ V  +  I +T   ++Q   + D V         ++   GF 
Subjt:  SMVEAFFHFGIINKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTLWMQCYTLKDFV---------KDGGNGF-

Query:  --------GDASLVS-------PIQSLLMGGLELGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGIHIH
                G  S VS         + +LM   E   +    VG +  +++HLQFADDT+ FS    + L+ L   + +F   SGL +N  KS I GI++ 
Subjt:  --------GDASLVS-------PIQSLLMGGLELGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGIHIH

Query:  DNDMNWLKKQGYW-----------------PTTYLGVSLGVI-------------------QNLWPVIEKIQHKLHS--WNTIDLVA-NH----------
           ++ L +   W                 P T  G+ LG I                     LW  +    +  HS  W+   LV  +H          
Subjt:  DNDMNWLKKQGYW-----------------PTTYLGVSLGVI-------------------QNLWPVIEKIQHKLHS--WNTIDLVA-NH----------

Query:  -------AQRVLGNGQGTSFWHDSWLPCGIIAKAYPRLYCVTTLPNVSIDQV--------WNIS
                + V+GNG+   FW D W     +   YPRL+ V    N+SI  V        WN++
Subjt:  -------AQRVLGNGQGTSFWHDSWLPCGIIAKAYPRLYCVTTLPNVSIDQV--------WNIS

RVW63564.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]6.2e-3732.63Show/hide
Query:  INSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIMSMVEAFFHFGII
        +NSE I +E + +++  Y+      +    +DW PI+ + A+ L+  F + ++F A+  L   K+PG  GFT    +  W  +K D++ +   F + GII
Subjt:  INSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIMSMVEAFFHFGII

Query:  NKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVW---------KKHLIRWTGTLWMQCYTLKDFVKDG--GNGFGDASLVSPIQS
        N+  N ++I L+PKK  +K ++D+RPISLI C YKIIA++LS RL+ V          KK          +      D VK     +        S  +S
Subjt:  NKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVW---------KKHLIRWTGTLWMQCYTLKDFVKDG--GNGFGDASLVSPIQS

Query:  LLMGGLE------LGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGIHIHDNDMNWLK-----KQGYWPT
         + G L       L + G   VG +  ++ HLQFADDT+LF+    + L+ L   + +F   SGL +N  KS I GI++  N ++ L      K   WP 
Subjt:  LLMGGLE------LGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGIHIHDNDMNWLK-----KQGYWPT

Query:  TYLGVSLG---VIQNLW-PVIEKIQHKLHSW
         YLG+ LG   +    W PVIE+I  +L +W
Subjt:  TYLGVSLG---VIQNLW-PVIEKIQHKLHSW

RVW87607.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]5.6e-3831.64Show/hide
Query:  ITEVHSRNVNSLINSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIM
        I E+ +     L N+E I +E +++++  YT      +    LDW PI+ + A  LE  FT++++  A+  L   K+PG  GFT    +  W  +K D++
Subjt:  ITEVHSRNVNSLINSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIM

Query:  SMVEAFFHFGIINKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTLWMQCYTLKDFV---------KDG-----
         +   F   GIIN+  N ++I LIPKK  +K ++D+RPISLI   YKIIA++LS RL+ V  +  I +T   ++Q   + D V         ++G     
Subjt:  SMVEAFFHFGIINKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTLWMQCYTLKDFV---------KDG-----

Query:  -----GNGFGDASLVSP---------IQSLLMGGLELGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGI
               G      +SP         +  +LM   E   +    VG +  +++HLQFADDT+ FS    + L+ L   + +F   SGL +N  KS I GI
Subjt:  -----GNGFGDASLVSP---------IQSLLMGGLELGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGI

Query:  HIHDNDMNWLK-----KQGYWPTTYLGVSLG---VIQNLW-PVIEKIQHKLHSW
        ++    ++ L      K   WP  YLG+ LG        W PV+E+I  +L  W
Subjt:  HIHDNDMNWLK-----KQGYWPTTYLGVSLG---VIQNLW-PVIEKIQHKLHSW

RVW91468.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]8.7e-3932.28Show/hide
Query:  ITEVHSRNVNSLINSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIM
        I E+ +     L N+E I +E +++++  YT      +    LDW PI+ + A  LE  FT++++  A+  L   K+PG  GFT    +  W  +K D++
Subjt:  ITEVHSRNVNSLINSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIM

Query:  SMVEAFFHFGIINKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTL------WMQCYTLKDFVKDGGNGFGDAS
         +   F   GIIN+  N ++I LIPKK  +K ++D+R ISLI   YKIIA++LS RL+ V  + +    G        WM+    K +VK    G     
Subjt:  SMVEAFFHFGIINKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTL------WMQCYTLKDFVKDGGNGFGDAS

Query:  LVSP---------IQSLLMGGLELGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGIHIHDNDMNWLK--
         +SP         +  +LM   E   +    VG +  ++ HLQFADDT+ FS    + L+ L   + +F   SGL +N  KS I GI++    ++ L   
Subjt:  LVSP---------IQSLLMGGLELGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGIHIHDNDMNWLK--

Query:  ---KQGYWPTTYLGVSLG---VIQNLW-PVIEKIQHKLHSWNTIDLV
           K   WP  YLG+ LG        W PV+E+I  +L  W    L+
Subjt:  ---KQGYWPTTYLGVSLG---VIQNLW-PVIEKIQHKLHSWNTIDLV

VVA31869.1 Hypothetical predicted protein, partial [Prunus dulcis]1.3e-3731.32Show/hide
Query:  DIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIMSMVEAFFHFGIINKRL
        +IE+E I F++  ++ ++   +    L+WCPI+   A  LER F  ++V  AV   G  KSPG  GF+  F +  W  +K D+M +++ FF  GI+N   
Subjt:  DIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIMSMVEAFFHFGIINKRL

Query:  NVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTLWMQCYTLK-----------------------------------D
        N T+ICLIPKK ++  VTD+RPISL+   YK+I+++L++RL++V    + +  G    +   L                                    +
Subjt:  NVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTLWMQCYTLK-----------------------------------D

Query:  FVKD----GGNGF--------GDA------SLVSPIQS-LLMGGLELGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNI
        FV D     G GF        GD       +LVS + S ++    ++  +     G   ++++HLQFADDT+ F     +   NL   +K+F   SG+ I
Subjt:  FVKD----GGNGF--------GDA------SLVSPIQS-LLMGGLELGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNI

Query:  NFGKSEILGIHIHDNDMN-----WLKKQGYWPTTYLGVSLG---VIQNLW-PVIEKIQHKLHSW
        N  KS ILGI+     +N     W  + G WP  YLG+ LG      N W PV++K++ +L  W
Subjt:  NFGKSEILGIHIHDNDMN-----WLKKQGYWPTTYLGVSLG---VIQNLW-PVIEKIQHKLHSW

TrEMBL top hitse value%identityAlignment
A0A438D4H9 Transposon TX1 uncharacterized 149 kDa protein7.9e-3828.45Show/hide
Query:  ITEVHSRNVNSLINSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIM
        I E+ +     L N+E I +E +++++  YT      +    LDW PI+ + A  L+  FT++++  A+  L   K+PG  GFT    +  W  +K D++
Subjt:  ITEVHSRNVNSLINSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIM

Query:  SMVEAFFHFGIINKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTLWMQCYTLKDFV---------KDGGNGF-
         +   F   GIIN+  N ++I LIPKK  +K ++D+RPISLI   YKIIA++LS RL+ V  +  I +T   ++Q   + D V         ++   GF 
Subjt:  SMVEAFFHFGIINKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTLWMQCYTLKDFV---------KDGGNGF-

Query:  --------GDASLVS-------PIQSLLMGGLELGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGIHIH
                G  S VS         + +LM   E   +    VG +  +++HLQFADDT+ FS    + L+ L   + +F   SGL +N  KS I GI++ 
Subjt:  --------GDASLVS-------PIQSLLMGGLELGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGIHIH

Query:  DNDMNWLKKQGYW-----------------PTTYLGVSLGVI-------------------QNLWPVIEKIQHKLHS--WNTIDLVA-NH----------
           ++ L +   W                 P T  G+ LG I                     LW  +    +  HS  W+   LV  +H          
Subjt:  DNDMNWLKKQGYW-----------------PTTYLGVSLGVI-------------------QNLWPVIEKIQHKLHS--WNTIDLVA-NH----------

Query:  -------AQRVLGNGQGTSFWHDSWLPCGIIAKAYPRLYCVTTLPNVSIDQV--------WNIS
                + V+GNG+   FW D W     +   YPRL+ V    N+SI  V        WN++
Subjt:  -------AQRVLGNGQGTSFWHDSWLPCGIIAKAYPRLYCVTTLPNVSIDQV--------WNIS

A0A438FUE8 Transposon TX1 uncharacterized 149 kDa protein3.0e-3732.63Show/hide
Query:  INSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIMSMVEAFFHFGII
        +NSE I +E + +++  Y+      +    +DW PI+ + A+ L+  F + ++F A+  L   K+PG  GFT    +  W  +K D++ +   F + GII
Subjt:  INSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIMSMVEAFFHFGII

Query:  NKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVW---------KKHLIRWTGTLWMQCYTLKDFVKDG--GNGFGDASLVSPIQS
        N+  N ++I L+PKK  +K ++D+RPISLI C YKIIA++LS RL+ V          KK          +      D VK     +        S  +S
Subjt:  NKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVW---------KKHLIRWTGTLWMQCYTLKDFVKDG--GNGFGDASLVSPIQS

Query:  LLMGGLE------LGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGIHIHDNDMNWLK-----KQGYWPT
         + G L       L + G   VG +  ++ HLQFADDT+LF+    + L+ L   + +F   SGL +N  KS I GI++  N ++ L      K   WP 
Subjt:  LLMGGLE------LGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGIHIHDNDMNWLK-----KQGYWPT

Query:  TYLGVSLG---VIQNLW-PVIEKIQHKLHSW
         YLG+ LG   +    W PVIE+I  +L +W
Subjt:  TYLGVSLG---VIQNLW-PVIEKIQHKLHSW

A0A438HT14 Transposon TX1 uncharacterized 149 kDa protein2.7e-3831.64Show/hide
Query:  ITEVHSRNVNSLINSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIM
        I E+ +     L N+E I +E +++++  YT      +    LDW PI+ + A  LE  FT++++  A+  L   K+PG  GFT    +  W  +K D++
Subjt:  ITEVHSRNVNSLINSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIM

Query:  SMVEAFFHFGIINKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTLWMQCYTLKDFV---------KDG-----
         +   F   GIIN+  N ++I LIPKK  +K ++D+RPISLI   YKIIA++LS RL+ V  +  I +T   ++Q   + D V         ++G     
Subjt:  SMVEAFFHFGIINKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTLWMQCYTLKDFV---------KDG-----

Query:  -----GNGFGDASLVSP---------IQSLLMGGLELGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGI
               G      +SP         +  +LM   E   +    VG +  +++HLQFADDT+ FS    + L+ L   + +F   SGL +N  KS I GI
Subjt:  -----GNGFGDASLVSP---------IQSLLMGGLELGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGI

Query:  HIHDNDMNWLK-----KQGYWPTTYLGVSLG---VIQNLW-PVIEKIQHKLHSW
        ++    ++ L      K   WP  YLG+ LG        W PV+E+I  +L  W
Subjt:  HIHDNDMNWLK-----KQGYWPTTYLGVSLG---VIQNLW-PVIEKIQHKLHSW

A0A438I435 Transposon TX1 uncharacterized 149 kDa protein4.2e-3932.28Show/hide
Query:  ITEVHSRNVNSLINSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIM
        I E+ +     L N+E I +E +++++  YT      +    LDW PI+ + A  LE  FT++++  A+  L   K+PG  GFT    +  W  +K D++
Subjt:  ITEVHSRNVNSLINSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIM

Query:  SMVEAFFHFGIINKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTL------WMQCYTLKDFVKDGGNGFGDAS
         +   F   GIIN+  N ++I LIPKK  +K ++D+R ISLI   YKIIA++LS RL+ V  + +    G        WM+    K +VK    G     
Subjt:  SMVEAFFHFGIINKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTL------WMQCYTLKDFVKDGGNGFGDAS

Query:  LVSP---------IQSLLMGGLELGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGIHIHDNDMNWLK--
         +SP         +  +LM   E   +    VG +  ++ HLQFADDT+ FS    + L+ L   + +F   SGL +N  KS I GI++    ++ L   
Subjt:  LVSP---------IQSLLMGGLELGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGIHIHDNDMNWLK--

Query:  ---KQGYWPTTYLGVSLG---VIQNLW-PVIEKIQHKLHSWNTIDLV
           K   WP  YLG+ LG        W PV+E+I  +L  W    L+
Subjt:  ---KQGYWPTTYLGVSLG---VIQNLW-PVIEKIQHKLHSWNTIDLV

A0A5E4FWN6 Reverse transcriptase domain-containing protein (Fragment)6.1e-3831.32Show/hide
Query:  DIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIMSMVEAFFHFGIINKRL
        +IE+E I F++  ++ ++   +    L+WCPI+   A  LER F  ++V  AV   G  KSPG  GF+  F +  W  +K D+M +++ FF  GI+N   
Subjt:  DIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIMSMVEAFFHFGIINKRL

Query:  NVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTLWMQCYTLK-----------------------------------D
        N T+ICLIPKK ++  VTD+RPISL+   YK+I+++L++RL++V    + +  G    +   L                                    +
Subjt:  NVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTLWMQCYTLK-----------------------------------D

Query:  FVKD----GGNGF--------GDA------SLVSPIQS-LLMGGLELGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNI
        FV D     G GF        GD       +LVS + S ++    ++  +     G   ++++HLQFADDT+ F     +   NL   +K+F   SG+ I
Subjt:  FVKD----GGNGF--------GDA------SLVSPIQS-LLMGGLELGKIGTHPVGISNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNI

Query:  NFGKSEILGIHIHDNDMN-----WLKKQGYWPTTYLGVSLG---VIQNLW-PVIEKIQHKLHSW
        N  KS ILGI+     +N     W  + G WP  YLG+ LG      N W PV++K++ +L  W
Subjt:  NFGKSEILGIHIHDNDMN-----WLKKQGYWPTTYLGVSLG---VIQNLW-PVIEKIQHKLHSW

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein2.2e-0833.33Show/hide
Query:  INSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIMSMVEAFFHFGIINKRLNVTYICLIPKK-LDAKSVTDYRPISLIPCAY
        +N +    L R  T  ++   + SL + KSPG  GFTAEF +     L   ++ + ++    GI+        I LIPK   D     ++RPISL+    
Subjt:  INSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIMSMVEAFFHFGIINKRLNVTYICLIPKK-LDAKSVTDYRPISLIPCAY

Query:  KIIARILSNRLKQVWKK
        KI+ +IL+NR++Q  KK
Subjt:  KIIARILSNRLKQVWKK

P08548 LINE-1 reverse transcriptase homolog8.2e-0828.4Show/hide
Query:  MITEVHSRNVNSLINSEDIEKEFINFYQAFYT-KDDTPRFLPTNLDWC--PINSDMAAE-LEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTL
        +I+ + + N     +  +I+K    +Y+  Y+ K +  + +   L+ C  P  S    E L R  +  ++   +++L   KSPG  GFT+EF +     L
Subjt:  MITEVHSRNVNSLINSEDIEKEFINFYQAFYT-KDDTPRFLPTNLDWC--PINSDMAAE-LEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTL

Query:  KTDIMSMVEAFFHFGIINKRLNVTYICLIPKK-LDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKK
           ++++ +     GI+        I LIPK   D     +YRPISL+    KI+ +IL+NR++Q  KK
Subjt:  KTDIMSMVEAFFHFGIINKRLNVTYICLIPKK-LDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKK

P11369 LINE-1 retrotransposable element ORF2 protein2.0e-0927.06Show/hide
Query:  MITEVHSRNVNSLINSEDIEKEFINFYQAFYTK-----DDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLT
        +I ++ +   +   + E+I+    +FY+  Y+      D+  +FL        +N D    L    +  ++   + SL + KSPG  GF+AEF    + T
Subjt:  MITEVHSRNVNSLINSEDIEKEFINFYQAFYTK-----DDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLT

Query:  LKTDIMSMVEAFFH----FGIINKRLNVTYICLIPK-KLDAKSVTDYRPISLIPCAYKIIARILSNRLKQ
         K D++ ++   FH     G +        I LIPK + D   + ++RPISL+    KI+ +IL+NR+++
Subjt:  LKTDIMSMVEAFFH----FGIINKRLNVTYICLIPK-KLDAKSVTDYRPISLIPCAYKIIARILSNRLKQ

P14381 Transposon TX1 uncharacterized 149 kDa protein3.8e-1332.1Show/hide
Query:  ITEVHSRNVNSLINSEDIEKEFINFYQAFYTKDD-TPRFLPTNLDWCPINSDMAAE-LEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTD
        IT + + +   L + E I     +FYQ  ++ D  +P       D  P+ S+   E LE   T D++  A++ +  +KSPGL G T EF +  W TL  D
Subjt:  ITEVHSRNVNSLINSEDIEKEFINFYQAFYTKDD-TPRFLPTNLDWCPINSDMAAE-LEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTD

Query:  IMSMVEAFFHFGIINKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQV
           ++   F  G +        + L+PKK D + + ++RP+SL+   YKI+A+ +S RLK V
Subjt:  IMSMVEAFFHFGIINKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTACAGAAGTTCATTCTCGTAATGTTAATAGTTTGATCAATTCTGAGGATATTGAAAAAGAATTCATCAATTTTTATCAAGCTTTTTATACCAAAGACGATACTCC
TCGTTTTCTCCCCACCAATCTTGATTGGTGCCCTATTAATTCAGATATGGCGGCTGAATTAGAGCGAGAATTCACTAAAGATAAAGTTTTTCTTGCTGTTAAATCTTTGG
GATCCAGTAAGTCTCCAGGTCTTTATGGTTTTACTGCTGAATTTTGTAAACATTCCTGGCTTACTCTCAAAACTGATATTATGTCCATGGTTGAAGCTTTCTTTCATTTT
GGTATTATTAATAAGAGGTTGAATGTAACATATATTTGCTTAATCCCCAAGAAATTGGATGCCAAATCAGTCACTGATTATCGTCCTATTAGTCTCATTCCTTGTGCCTA
CAAGATAATAGCAAGAATCCTGTCTAACCGATTAAAGCAGGTCTGGAAAAAGCATTTGATAAGATGGACGGGGACTTTATGGATGCAATGTTACACTCTAAAGGATTTTG
TCAAAGATGGAGGAAATGGATTCGGGGATGCATCACTAGTGTCACCTATTCAATCATTATTAATGGGAGGCCTCGAGTTGGGTAAAATTGGGACTCATCCAGTTGGTATC
TCTAATATTCAAATAAATCACTTGCAGTTTGCTGATGACACGTTACTGTTTTCCATCTTTGACTTGAAAGCATTGAAGAATTTGTTTGACTTTATCAAAATTTTTGAATG
GGCTTCTGGTTTGAATATTAATTTTGGCAAAAGTGAGATTTTGGGAATCCACATACATGATAATGATATGAATTGGTTAAAGAAGCAAGGATACTGGCCTACTACATATC
TTGGTGTTTCTTTGGGGGTAATCCAAAATCTATGGCCTGTGATTGAAAAAATTCAGCATAAACTTCATAGTTGGAATACTATTGATCTAGTTGCAAATCATGCTCAAAGA
GTTCTTGGTAATGGACAAGGGACATCTTTCTGGCATGATTCATGGTTACCATGTGGAATTATTGCAAAGGCTTATCCAAGATTATATTGCGTAACCACTTTACCGAATGT
CTCGATTGATCAAGTATGGAATATCTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGATTACAGAAGTTCATTCTCGTAATGTTAATAGTTTGATCAATTCTGAGGATATTGAAAAAGAATTCATCAATTTTTATCAAGCTTTTTATACCAAAGACGATACTCC
TCGTTTTCTCCCCACCAATCTTGATTGGTGCCCTATTAATTCAGATATGGCGGCTGAATTAGAGCGAGAATTCACTAAAGATAAAGTTTTTCTTGCTGTTAAATCTTTGG
GATCCAGTAAGTCTCCAGGTCTTTATGGTTTTACTGCTGAATTTTGTAAACATTCCTGGCTTACTCTCAAAACTGATATTATGTCCATGGTTGAAGCTTTCTTTCATTTT
GGTATTATTAATAAGAGGTTGAATGTAACATATATTTGCTTAATCCCCAAGAAATTGGATGCCAAATCAGTCACTGATTATCGTCCTATTAGTCTCATTCCTTGTGCCTA
CAAGATAATAGCAAGAATCCTGTCTAACCGATTAAAGCAGGTCTGGAAAAAGCATTTGATAAGATGGACGGGGACTTTATGGATGCAATGTTACACTCTAAAGGATTTTG
TCAAAGATGGAGGAAATGGATTCGGGGATGCATCACTAGTGTCACCTATTCAATCATTATTAATGGGAGGCCTCGAGTTGGGTAAAATTGGGACTCATCCAGTTGGTATC
TCTAATATTCAAATAAATCACTTGCAGTTTGCTGATGACACGTTACTGTTTTCCATCTTTGACTTGAAAGCATTGAAGAATTTGTTTGACTTTATCAAAATTTTTGAATG
GGCTTCTGGTTTGAATATTAATTTTGGCAAAAGTGAGATTTTGGGAATCCACATACATGATAATGATATGAATTGGTTAAAGAAGCAAGGATACTGGCCTACTACATATC
TTGGTGTTTCTTTGGGGGTAATCCAAAATCTATGGCCTGTGATTGAAAAAATTCAGCATAAACTTCATAGTTGGAATACTATTGATCTAGTTGCAAATCATGCTCAAAGA
GTTCTTGGTAATGGACAAGGGACATCTTTCTGGCATGATTCATGGTTACCATGTGGAATTATTGCAAAGGCTTATCCAAGATTATATTGCGTAACCACTTTACCGAATGT
CTCGATTGATCAAGTATGGAATATCTCATAG
Protein sequenceShow/hide protein sequence
MITEVHSRNVNSLINSEDIEKEFINFYQAFYTKDDTPRFLPTNLDWCPINSDMAAELEREFTKDKVFLAVKSLGSSKSPGLYGFTAEFCKHSWLTLKTDIMSMVEAFFHF
GIINKRLNVTYICLIPKKLDAKSVTDYRPISLIPCAYKIIARILSNRLKQVWKKHLIRWTGTLWMQCYTLKDFVKDGGNGFGDASLVSPIQSLLMGGLELGKIGTHPVGI
SNIQINHLQFADDTLLFSIFDLKALKNLFDFIKIFEWASGLNINFGKSEILGIHIHDNDMNWLKKQGYWPTTYLGVSLGVIQNLWPVIEKIQHKLHSWNTIDLVANHAQR
VLGNGQGTSFWHDSWLPCGIIAKAYPRLYCVTTLPNVSIDQVWNIS