CuGenDBv2

Gene ID	Lag0021530
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
Genome location	chr7:8794725..8796255
RNA-Seq Expression	Lag0021530
Synteny	Lag0021530
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0031297 - replication fork processing (biological process) GO:0005634 - nucleus (cellular component) GO:0005524 - ATP binding (molecular function) GO:0036310 - annealing helicase activity (molecular function)
InterPro domains	IPR001650 - Helicase, C-terminal IPR027417 - P-loop containing nucleoside triphosphate hydrolase IPR030101 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_023539951.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1 [Cucurbita pepo subsp. pepo]

8.2e-85

95.93

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        MI AIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRA GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH
        TVDDIIWDVVQSKLENLGQMLDGEENT+EVAVKQQP +SSSPNSKQKTLD FIKRCNNVSAD QSKLKLPRH
Subjt:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH

XP_023539953.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X2 [Cucurbita pepo subsp. pepo]

8.2e-85

95.93

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        MI AIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRA GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH
        TVDDIIWDVVQSKLENLGQMLDGEENT+EVAVKQQP +SSSPNSKQKTLD FIKRCNNVSAD QSKLKLPRH
Subjt:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH

XP_023539954.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X3 [Cucurbita pepo subsp. pepo]

8.2e-85

95.93

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        MI AIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRA GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH
        TVDDIIWDVVQSKLENLGQMLDGEENT+EVAVKQQP +SSSPNSKQKTLD FIKRCNNVSAD QSKLKLPRH
Subjt:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH

XP_023539955.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X4 [Cucurbita pepo subsp. pepo]

8.2e-85

95.93

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        MI AIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRA GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH
        TVDDIIWDVVQSKLENLGQMLDGEENT+EVAVKQQP +SSSPNSKQKTLD FIKRCNNVSAD QSKLKLPRH
Subjt:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH

XP_023539957.1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X6 [Cucurbita pepo subsp. pepo]

8.2e-85

95.93

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        MI AIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRA GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH
        TVDDIIWDVVQSKLENLGQMLDGEENT+EVAVKQQP +SSSPNSKQKTLD FIKRCNNVSAD QSKLKLPRH
Subjt:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH

TrEMBL top hits

e value

%identity

Alignment

A0A6J1GI27 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1

2.0e-84

94.77

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        MI AIHQFFQKKKVNCIRIDGGTPSATRQAL+ADFQQKDSIRAAVLSIRA GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH
        TVDDIIWDVVQSKLENLGQMLDGEENT+EVAVKQQP +SSSPNSKQKTLD FIKRC+NVSAD QSKLKLPRH
Subjt:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH

A0A6J1I423 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X3

2.6e-84

94.77

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        MI AIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRA GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH
        TVDDIIWDVVQSKLENLGQMLDGEENT+EVAVKQQP +SSSPNSKQKTLD FIKRC+NVSAD QSK+KLPRH
Subjt:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH

A0A6J1I574 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X2

2.6e-84

94.77

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        MI AIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRA GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH
        TVDDIIWDVVQSKLENLGQMLDGEENT+EVAVKQQP +SSSPNSKQKTLD FIKRC+NVSAD QSK+KLPRH
Subjt:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH

A0A6J1I7S1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X6

2.6e-84

94.77

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        MI AIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRA GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH
        TVDDIIWDVVQSKLENLGQMLDGEENT+EVAVKQQP +SSSPNSKQKTLD FIKRC+NVSAD QSK+KLPRH
Subjt:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH

A0A6J1IAQ1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X5

2.6e-84

94.77

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        MI AIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRA GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH
        TVDDIIWDVVQSKLENLGQMLDGEENT+EVAVKQQP +SSSPNSKQKTLD FIKRC+NVSAD QSK+KLPRH
Subjt:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH

SwissProt top hits

e value

%identity

Alignment

B2ZFP3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1

1.1e-28

51.15

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        ++D+I +   +K ++ IRIDG TPSA RQ L   FQ       AVLSI A  +GLTL +A+ V+FAEL W PG LIQAEDR HRIGQ S+V+IHYL+A  
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVA
        T DD +W ++Q+K+  L Q+   E N  E A
Subjt:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVA

B4F769 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1

6.6e-29

46.98

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        ++DAI +  ++K V  IRIDG TPSA R+ L   FQ       AVLSI A  +GLT ++A  V+FAEL W PG LIQAEDR HRIGQ +SV IHYL+A  
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTL
        T DD +W ++Q K++ LG+    E N  E+    +       + KQKT+
Subjt:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTL

Q0P4U8 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1

1.3e-29

46.39

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        ++D I +   KK V  IRIDG T SA RQ+L   FQ  +    AVLSI A  +GLTL++A  V+FAEL W PG LIQAEDR HRIGQ SSVNIHYL+A  
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTL-DCFIKRCNNVSADAQS
        T DD +W ++Q K++ LGQ    E N  E     +       + KQKT+ D F +  +   A+  +
Subjt:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTL-DCFIKRCNNVSADAQS

Q498E7 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1

1.3e-29

46.99

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        ++D I +   KK+V  IRIDG T SA RQ+L   FQ  +    AVLSI A  +GLTL++A  V+FAEL W PG LIQAEDR HRIGQ SSVNIHYL+A  
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTL-DCFIKRCNNVSADAQS
        T DD +W ++Q K++ LGQ    E N  E     +       + KQKT+ D F +  +   A+  S
Subjt:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTL-DCFIKRCNNVSADAQS

Q8MNV7 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 homolog

2.4e-31

56.67

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        ++D I     K+K+  IRIDG TPS  R AL   FQ  D+IR AVLSI A GVG+TLTAAS V+FAE+ + PG L+QAEDRAHR+GQ  SV + YL+A  
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQM
        T DD++W++VQ KL+ LGQ+
Subjt:  TVDDIIWDVVQSKLENLGQM

Arabidopsis top hits

e value

%identity

Alignment

AT1G48310.1 chromatin remodeling factor18

1.3e-64

68.97

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        M++ +HQF +KKKV CIRIDG TP+++RQALV+DFQ KD I+AAVLSIRA GVG+TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVA---VKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPR
        TVDDIIWDVVQSKL+NLGQMLDG+EN ++VA   +   P    +  +KQ+TL+ F+KRC  +  D +    +P+
Subjt:  TVDDIIWDVVQSKLENLGQMLDGEENTMEVA---VKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPR

AT3G12810.1 SNF2 domain-containing protein / helicase domain-containing protein

2.0e-17

36.84

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        M+D +  F        +R+DG TP   RQ L+  F     I   +LS R+GGVG+ L  A TVIF +  W P    QA+DR HRIGQ   V+I+ L++  
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSK--LENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLD
        T+++ I      K  L+NL  + +GE NT E   K  P+   S +    T D
Subjt:  TVDDIIWDVVQSK--LENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLD

AT3G57300.1 INO80 ortholog

2.4e-18

40.57

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        M++ +  +   +K   +R+DG +    R+ +V DFQ +  I   +LS RAGG+G+ LTAA TVIF E  W P   +QA DRAHR+GQ   V ++ L+  +
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDII
        TV++ I
Subjt:  TVDDII

AT3G57300.2 INO80 ortholog

2.4e-18

40.57

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        M++ +  +   +K   +R+DG +    R+ +V DFQ +  I   +LS RAGG+G+ LTAA TVIF E  W P   +QA DRAHR+GQ   V ++ L+  +
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDII
        TV++ I
Subjt:  TVDDII

AT5G07810.1 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein

2.5e-23

35.98

Show/hide

Query:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND
        ++D I +F   K +  +RIDG T    RQ  V  FQ    ++ A++ + AGGVGL  +AA  V+F EL  TP  L+QAEDRAHR GQ S+VN++   A D
Subjt:  MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLAND

Query:  TVDDIIWDVVQSKLENLGQMLDGE-ENTMEVAVKQQPV-TSSSPNSKQKTLDCFIKRCNNVSAD
        T+D+  W  +  KL  +    DG+ +   E+ +    +   +  +S+++ L+      N V AD
Subjt:  TVDDIIWDVVQSKLENLGQMLDGE-ENTMEVAVKQQPV-TSSSPNSKQKTLDCFIKRCNNVSAD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATTGATGCTATACACCAGTTCTTTCAAAAAAAGAAAGTGAACTGCATTAGAATCGACGGCGGTACTCCTTCGGCAACACGGCAAGCTCTGGTTGCAGACTTTCAGCA
GAAAGATTCTATCAGGGCTGCAGTGTTATCTATAAGAGCTGGAGGTGTTGGGCTAACGTTAACCGCTGCGAGCACGGTTATTTTCGCCGAGCTTTCTTGGACTCCAGGTG
ATCTGATTCAAGCTGAAGATCGTGCACATAGAATTGGACAGGTGTCTTCCGTTAACATACATTATCTACTGGCGAACGACACAGTCGATGATATTATATGGGATGTTGTT
CAGAGCAAGTTAGAAAATTTAGGACAGATGCTGGATGGGGAAGAGAACACAATGGAAGTGGCAGTGAAGCAGCAGCCAGTCACAAGCAGCAGCCCAAATTCAAAGCAAAA
GACATTAGACTGTTTCATTAAGCGTTGCAACAATGTAAGTGCTGATGCCCAATCTAAGTTGAAACTTCCCAGGCACTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MIDAIHQFFQKKKVNCIRIDGGTPSATRQALVADFQQKDSIRAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIWDVV
QSKLENLGQMLDGEENTMEVAVKQQPVTSSSPNSKQKTLDCFIKRCNNVSADAQSKLKLPRH

Lag0021530 (gene) of Sponge gourd (AG-4) v1 genome