CuGenDBv2

Gene ID	Lag0021560
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	COP9 signalosome complex subunit 5b-like
Genome location	chr7:9195081..9198070
RNA-Seq Expression	Lag0021560
Synteny	Lag0021560
Gene Ontology terms	GO:0000338 - protein deneddylation (biological process) GO:1990641 - response to iron ion starvation (biological process) GO:0005737 - cytoplasm (cellular component) GO:0008180 - COP9 signalosome (cellular component) GO:0004222 - metalloendopeptidase activity (molecular function) GO:0019784 - NEDD8-specific protease activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0070122 - isopeptidase activity (molecular function)
InterPro domains	IPR037740 - COP9 signalosome complex subunit 5 IPR040961 - Cop9 signalosome subunit 5 C-terminal domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6585421.1 COP9 signalosome complex subunit 5b, partial [Cucurbita argyrosperma subsp. sororia]

5.1e-30

85.37

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP
        K+  F +   +YYALDITYFKSSLDCHLLDLL NKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAH R GPLIAP
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP

KAG7020342.1 COP9 signalosome complex subunit 5b [Cucurbita argyrosperma subsp. argyrosperma]

5.1e-30

85.37

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP
        K+  F +   +YYALDITYFKSSLDCHLLDLL NKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAH R GPLIAP
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP

XP_022951989.1 COP9 signalosome complex subunit 5b-like [Cucurbita moschata]

5.1e-30

85.37

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP
        K+  F +   +YYALDITYFKSSLDCHLLDLL NKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAH R GPLIAP
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP

XP_022961810.1 COP9 signalosome complex subunit 5b-like [Cucurbita moschata]

1.1e-29

84.15

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP
        K+  F +   +YYALDITYFKSSLDCHLLDLL NKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQ+ENQLAH R GPLIAP
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP

XP_023538610.1 COP9 signalosome complex subunit 5b-like isoform X1 [Cucurbita pepo subsp. pepo]

5.1e-30

85.37

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP
        K+  F +   +YYALDITYFKSSLDCHLLDLL NKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAH R GPLIAP
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPC3 MPN domain-containing protein

5.5e-30

84.15

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP
        K+  F +   +YYALDITYFKSSLDCHLLDLL NKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQ+ENQLAH R GPLIAP
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP

A0A5A7V9Z7 COP9 signalosome complex subunit 5b-like

5.5e-30

84.15

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP
        K+  F +   +YYALDITYFKSSLDCHLLDLL NKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQ+ENQLAH R GPLIAP
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP

A0A6J1GKC4 COP9 signalosome complex subunit 5b-like

2.5e-30

85.37

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP
        K+  F +   +YYALDITYFKSSLDCHLLDLL NKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAH R GPLIAP
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP

A0A6J1HDA2 COP9 signalosome complex subunit 5b-like

5.5e-30

84.15

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP
        K+  F +   +YYALDITYFKSSLDCHLLDLL NKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQ+ENQLAH R GPLIAP
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP

A0A6J1KBB5 COP9 signalosome complex subunit 5b-like

5.5e-30

84.15

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP
        K+  F +   +YYALDITYFKSSLDCHLLDLL NKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQ+ENQLAH R GPLIAP
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP

SwissProt top hits

e value

%identity

Alignment

Q54PF3 COP9 signalosome complex subunit 5

3.8e-20

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPR
        K+  F +   +YY+L+ITYFKSSLD  LLD L NKYWVNTLSSSP+  N DY+ GQI+DL+EKLEQ E QL+H R
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPR

Q6P635 COP9 signalosome complex subunit 5

1.4e-17

64.79

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQL
        K+  F +   +YYAL++TYFKSSLD  LL+LL NKYWVNTLSSS LL N DY  GQ+ DL+EKLEQ E QL
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQL

Q8H936 COP9 signalosome complex subunit 5

1.0e-25

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLI
        K+  F +   +YYALDITYFKSSLD HLLDLL NKYWVNTLSSSPLLGN DYVAGQI DLA+KLEQ E QLAH R G L+
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLI

Q8LAZ7 COP9 signalosome complex subunit 5a

1.6e-26

76.83

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP
        K+  F +   +YY+LDITYFKSSLD HLLDLL NKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQ E+QLA+ R G  IAP
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP

Q9FVU9 COP9 signalosome complex subunit 5b

3.0e-25

71.25

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLI
        K+  F +   +YY+LD+TYFKSSLD HLLDLL NKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQ E+ L   R G ++
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLI

Arabidopsis top hits

e value

%identity

Alignment

AT1G22920.1 COP9 signalosome 5A

1.1e-27

76.83

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP
        K+  F +   +YY+LDITYFKSSLD HLLDLL NKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQ E+QLA+ R G  IAP
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP

AT1G22920.2 COP9 signalosome 5A

1.1e-27

76.83

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP
        K+  F +   +YY+LDITYFKSSLD HLLDLL NKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQ E+QLA+ R G  IAP
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAP

AT1G71230.1 COP9-signalosome 5B

2.1e-26

71.25

Show/hide

Query:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLI
        K+  F +   +YY+LD+TYFKSSLD HLLDLL NKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQ E+ L   R G ++
Subjt:  KLTVFPIANYKYYALDITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTCGATGAAATGTCTGAGAGAAGTGGAGGGTGGGAAAGAGCGAAAAAGCTTTTTATGGGAGTTTGCTATGCATTAGGCATGAGGATGGTGAATGCATTGAAGAGGGA
AAGAAGAGGCCAAGGCAGCAAAGCACCGAGACCTTATCTTCTAAAGCAACAAAAAGTACAGTCAAAGTTTATTGATCTTGCCTGCTACTCACTAATCATGGCTTCCATTG
TTGCTTCTCTTCCTCTGCCATTGTTGGCCCCTGGCAAAAGCTTCAACCTTTTGAATACTTCCCAGAAGCTCACTGTTTTTCCCATTGCAAACTACAAGTATTATGCGCTT
GATATCACTTATTTCAAGTCTTCACTTGACTGCCACCTCTTGGATTTGCTTAGGAACAAGTACTGGGTCAATACTCTTTCATCTTCTCCTCTCTTGGGTAATGGAGATTA
TGTTGCTGGTCAAATCTCAGATTTAGCTGAAAAACTTGAGCAGTTGGAAAATCAGTTGGCTCACCCCCGCGTTGGGCCATTAATAGCTCCTTATTTATCTTATGCTTTCT
TCTTTTATATATATACACGAGCACATGTTATTCTCTCTTGTACATGTGAATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MFDEMSERSGGWERAKKLFMGVCYALGMRMVNALKRERRGQGSKAPRPYLLKQQKVQSKFIDLACYSLIMASIVASLPLPLLAPGKSFNLLNTSQKLTVFPIANYKYYAL
DITYFKSSLDCHLLDLLRNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQLENQLAHPRVGPLIAPYLSYAFFFYIYTRAHVILSCTCE

Lag0021560 (gene) of Sponge gourd (AG-4) v1 genome