CuGenDBv2

Gene ID	Lag0021583
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr7:9480075..9481029
RNA-Seq Expression	Lag0021583
Synteny	Lag0021583
Gene Ontology terms	GO:0006979 - response to oxidative stress (biological process) GO:0010188 - response to microbial phytotoxin (biological process) GO:0050832 - defense response to fungus (biological process) GO:0005737 - cytoplasm (cellular component) GO:0005886 - plasma membrane (cellular component) GO:0016671 - oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_030923826.1 uncharacterized protein LOC115950728 [Quercus lobata]

1.0e-40

44.32

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Query:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM
        Y  ASGQCIN  KS ++F  N  +  +  + NLLG+  +  F  YLGLP    + K + F FL D+VW  LQGWK  + SK GKEVLIK++ QSIPTY M
Subjt:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM

Query:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDL---DLWLPRPTTFKILMVTGSFN
        G F++P  +  +++A+CA+FWW + GD+RK+HW+ W  L KPK+ GG+ F+D+   +L +     ++++  TGS +
Subjt:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDL---DLWLPRPTTFKILMVTGSFN

XP_030924923.1 uncharacterized protein LOC115951949 [Quercus lobata]

1.1e-39

47.71

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Query:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM
        Y ++SGQCIN++KS+VYFS NV  + R  +  LLG+  ++ F  YLGLP    + K + F FL D+VW  +QGWK  L S+ GKE+LIK++ QSIPTY M
Subjt:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM

Query:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDL
        G F++P  +  +++A+CA+FWW +  ++RK+HW+KW+ L + K+ GG+ F+DL
Subjt:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDL

XP_030931246.1 uncharacterized protein LOC115957168 [Quercus lobata]

2.0e-41

45.98

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Query:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM
        Y  ASGQCINL KS VYFS N  +  R  + N+LG+  +  F  YLGLP    + K + F FL D++W  LQGWK  L S+ GKEVLIK++ QSIPTY M
Subjt:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM

Query:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDL---DLWLPRPTTFKILMVTGS
        G F +P  +  +++A+CA+FWW + GD+RK+HW+ W+ + KPK  GG+ F+D+   +L +     ++++  TGS
Subjt:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDL---DLWLPRPTTFKILMVTGS

XP_030939190.1 uncharacterized protein LOC115964041 [Quercus lobata]

1.3e-40

39.32

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Query:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM
        YE+ASGQ IN  K+ ++FSK+   D +  +   L + V+  +  YLGLP++  + K   F  L  ++W  LQGW+  L S+ G+E+L+K++ Q++PTY M
Subjt:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM

Query:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDLDLWLPRPTTFKILMVTGSFNANALVSEFV-TPSNQWDVAKLQQHFCD
         CF++P T+  +I AL  KF+W ++GD RK+HW KW +LCKPK  GGL F+DL  WL      KI+      N NA VS  +   S +W    +  +F +
Subjt:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDLDLWLPRPTTFKILMVTGSFNANALVSEFV-TPSNQWDVAKLQQHFCD

Query:  KDVQLI
         +  +I
Subjt:  KDVQLI

XP_030963604.1 uncharacterized protein LOC115984727 [Quercus lobata]

1.5e-39

50.33

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Query:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM
        YEKASGQ IN  K+ ++FSKNV   ++  + NLLG+  I  +  YLGLPA   + K     ++ D+VW  LQGWK  L S+ GKEVL+K ++Q+IPT+AM
Subjt:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM

Query:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDL
         CFR+P  +   I  L  KFWW ++GD+R +HW+KW  LCKPK  GGL F+DL
Subjt:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDL

TrEMBL top hits

e value

%identity

Alignment

A0A0J8B9Y6 Reverse transcriptase domain-containing protein

1.7e-38

49.36

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Query:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM
        YE+ASGQ IN +KS V FSK+V ++ RV + +L G+  ++    YLGLP    + K   F  L ++VW  LQGWK  L S+ GKEVL+K+IIQSIPTY M
Subjt:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM

Query:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDLDLW
          F +P  IL +I+A+C++FWW  +G +RKMHW  W  LC PK  GG+ F+DL ++
Subjt:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDLDLW

A0A803PM68 Uncharacterized protein

1.3e-38

47.44

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Query:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM
        Y  ASGQ +N +KS + F + V    +  L+ L+G+ V+D++G YLGLP+   + K + F+F+  KVW+ L+GWK S FS  GKE+LIK+I+Q+IPTY M
Subjt:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM

Query:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDLDLW
         CFR+PK  +  I ++ A+FWW       K+HW KW+ LCK KE GGL F+DL L+
Subjt:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDLDLW

A0A803PV25 Uncharacterized protein

2.3e-38

48.08

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Query:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM
        Y  ASGQ +N +KS + F ++V +  R +L+  +G+ V+D++G YLGLP+   + K + F+F ++KVW+ L+GWK S FS  GKEVLIK+I+Q+IPTY M
Subjt:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM

Query:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDLDLW
         CFR+PK  +  I ++ A+FWW       K+HW KW+ LCK KE GGL F+DL L+
Subjt:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDLDLW

A0A803PWX1 Uncharacterized protein

8.3e-41

49.36

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Query:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM
        Y KASGQ +N +KS + F + V    R +L+N++G+ V+D++G YLGLP+   + K + F+F+ +KVW+ L+GWK S FS  GKEVLIK++IQ+IPTY M
Subjt:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM

Query:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDLDLW
         CFR+PK  +  I ++ A+FWW       K+HW KW+ LCK KE GGL F+DL L+
Subjt:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDLDLW

A0A803QIY9 Uncharacterized protein

2.3e-38

34.02

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Query:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM
        Y +ASGQ +N +KS++ FS N    ++    N+LGM + D    YL LPA   + K + F  + +++W +L  W   +FS GGKEVL+K++IQSIPTY M
Subjt:  YEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAM

Query:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDL-----------------------------------DLWLPRPTTFKI
         CF++P     +I ++ + FWW    DK+K+HW++W   CK K  GGL F++                                    D W+P  + F  
Subjt:  GCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDL-----------------------------------DLWLPRPTTFKI

Query:  LMVTGSFNANALVSEFVTPSNQWDVAKLQQHFCDKDVQLIV
        +  TG  N N+ V+E++TP  +W+++KL   F   DV  I+
Subjt:  LMVTGSFNANALVSEFVTPSNQWDVAKLQQHFCDKDVQLIV

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

7.8e-12

33.71

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Query:  FQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAMGCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGL
        F  +L++V S + GW+    S  G+  L K+++ S+P ++M    +P++IL ++  L   F W    +K+K H  KW+ +C PK+ GGL
Subjt:  FQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAMGCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGL

P93295 Uncharacterized mitochondrial protein AtMg00310

2.5e-10

45.9

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Query:  SIPTYAMGCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKE-SGGLNFQDL
        ++P YAM CFR+ K +  K+++   +FWW    +KRK+ W  W  LCK KE  GGL F+DL
Subjt:  SIPTYAMGCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKE-SGGLNFQDL

Arabidopsis top hits

e value

%identity

Alignment

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

1.1e-13

33.03

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Query:  YLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAMGCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKE
        YLGLP    K  T D+  L++K+   +  W     S  G+  LI S+I S+  + M  FR+P   + +I ++C+ F W       K     W+D+C PK+
Subjt:  YLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAMGCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKE

Query:  SGGLNFQDL
         GGL  + L
Subjt:  SGGLNFQDL

AT4G29090.1 Ribonuclease H-like superfamily protein

3.6e-12

40.98

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Query:  SIPTYAMGCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDLD
        ++PTY M CF +PKT+  +I ++ A FWWR + + + MHW+ W+ L   K  GG+ F+D++
Subjt:  SIPTYAMGCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDLD

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

1.8e-11

45.9

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Query:  SIPTYAMGCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKE-SGGLNFQDL
        ++P YAM CFR+ K +  K+++   +FWW    +KRK+ W  W  LCK KE  GGL F+DL
Subjt:  SIPTYAMGCFRIPKTILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKE-SGGLNFQDL

Sequences

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CDS sequence

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ATGTTTTATTATGAAAAAGCTTCAGGTCAGTGCATCAATCTGAATAAATCCATGGTGTATTTTTCAAAGAATGTTGGTTCTGATTCAAGAGTTTATTTGAGTAATTTGTT
GGGTATGTGTGTGATCGATTCCTTTGGTCCTTATCTGGGTCTACCTGCAACTTTCCATAAAGGTAAAACTAGAGATTTTCAGTTCTTATTGGACAAAGTTTGGTCAGTCC
TCCAAGGTTGGAAATGTAGTTTGTTCTCGAAAGGCGGGAAGGAGGTGTTGATTAAGAGTATTATCCAATCGATTCCTACATATGCAATGGGTTGTTTCAGGATACCCAAA
ACAATCCTCACAAAAATATCAGCTCTATGTGCAAAGTTTTGGTGGAGAGAGCAGGGGGACAAGCGAAAGATGCACTGGAGGAAGTGGAATGATCTGTGTAAACCAAAGGA
ATCTGGTGGACTAAATTTTCAGGACTTGGATTTGTGGCTTCCTCGTCCAACAACCTTCAAGATTTTGATGGTAACAGGATCTTTTAATGCTAATGCCCTTGTGTCTGAGT
TTGTCACCCCATCTAATCAATGGGATGTAGCCAAACTTCAACAACATTTTTGTGATAAGGATGTTCAATTGATTGTAGTCTCCCTATTAGTCAGACGGCTCTTGATTTAT
GAACATGGCATTATGATAGGACTGGATCGTACTCTGTTCGAAGTGGATATAAACTTAGCATGA

mRNA sequence

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Protein sequence

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MFYYEKASGQCINLNKSMVYFSKNVGSDSRVYLSNLLGMCVIDSFGPYLGLPATFHKGKTRDFQFLLDKVWSVLQGWKCSLFSKGGKEVLIKSIIQSIPTYAMGCFRIPK
TILTKISALCAKFWWREQGDKRKMHWRKWNDLCKPKESGGLNFQDLDLWLPRPTTFKILMVTGSFNANALVSEFVTPSNQWDVAKLQQHFCDKDVQLIVVSLLVRRLLIY
EHGIMIGLDRTLFEVDINLA

Lag0021583 (gene) of Sponge gourd (AG-4) v1 genome