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Lag0021600 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021600
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionB-block_TFIIIC domain-containing protein
Genome locationchr7:9660583..9661005
RNA-Seq ExpressionLag0021600
SyntenyLag0021600
Gene Ontology termsGO:0006384 - transcription initiation from RNA polymerase III promoter (biological process)
GO:0042791 - 5S class rRNA transcription by RNA polymerase III (biological process)
GO:0000127 - transcription factor TFIIIC complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR044210 - Transcription facto Tfc3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597622.1 hypothetical protein SDJN03_10802, partial [Cucurbita argyrosperma subsp. sororia]5.1e-5388Show/hide
Query:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MD  VSSAVEEICSQG NGL LRNLW RLEPSLSASGLDLSNGVKTAVWTQL  +PSLQF+ GKVTYDAKDPSIQSFE+AERLN+KV+ KE+LRDNFVGL
Subjt:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSASSNMSAHQRRVLERLAIAR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

KAG7029063.1 hypothetical protein SDJN02_10246 [Cucurbita argyrosperma subsp. argyrosperma]5.1e-5388Show/hide
Query:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MD  VSSAVEEICSQG NGL LRNLW RLEPSLSASGLDLSNGVKTAVWTQL  +PSLQF+ GKVTYDAKDPSIQSFE+AERLN+KV+ KE+LRDNFVGL
Subjt:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSASSNMSAHQRRVLERLAIAR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

XP_023539363.1 uncharacterized protein LOC111800020 [Cucurbita pepo subsp. pepo]5.1e-5388Show/hide
Query:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MD  VSSAVEEICSQG NGL LRNLW RLEPSLSASGLDLSNGVKTAVWTQL  +PSLQF+ GKVTYDAKDPSIQSFE+AERLN+KV+ KE+LRDNFVGL
Subjt:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSASSNMSAHQRRVLERLAIAR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

XP_038903712.1 uncharacterized protein LOC120090216 isoform X1 [Benincasa hispida]7.9e-5491.2Show/hide
Query:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MDA VSSAVEEICSQG NGLALRNLW RLEPSLSASGLDLSNGVK AVWTQLLRVPSLQFE  K  +DAKDPSIQSFEDAERLNLKVVAKEHLRD+FVGL
Subjt:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSA SNMSAHQRRVLERLAIAR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

XP_038903737.1 uncharacterized protein LOC120090216 isoform X2 [Benincasa hispida]7.9e-5491.2Show/hide
Query:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MDA VSSAVEEICSQG NGLALRNLW RLEPSLSASGLDLSNGVK AVWTQLLRVPSLQFE  K  +DAKDPSIQSFEDAERLNLKVVAKEHLRD+FVGL
Subjt:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSA SNMSAHQRRVLERLAIAR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

TrEMBL top hitse value%identityAlignment
A0A0A0LAZ9 B-block_TFIIIC domain-containing protein2.3e-5188.8Show/hide
Query:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MDA VSSAVEEICS G NGLAL NLW +LEPSLSASGLDLSNGVK AVWTQLLRVPSLQFE GK  YDAKDPSIQSFE AERLNLKVVAK HLRD+FVGL
Subjt:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSASSNMSAHQRRVLERLA AR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

A0A5A7VKG0 B-block_TFIIIC domain-containing protein3.0e-5188.8Show/hide
Query:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MDA VSSAVEEICS G NGLAL NLW +LEPSLSASGLDLSNGVK AVWTQLLRVPSLQFE GK  YDAKDPSIQSFE AERLNLKVVAK HLRD+FVGL
Subjt:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSASSNMSAHQRRVLERLA AR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

A0A6J1EWQ4 uncharacterized protein LOC111439088 isoform X17.2e-5387.2Show/hide
Query:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MD  VSSAVEEICSQG NGL LRNLW RLEPSLSASGLDLSNGVKTAVWTQL  +PSLQF+ GKVTYDAKDPSI+SFE+AERLN+KV+ KE+LRDNFVGL
Subjt:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSASSNMSAHQRRVLERLAIAR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

A0A6J1F242 uncharacterized protein LOC111439088 isoform X27.2e-5387.2Show/hide
Query:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MD  VSSAVEEICSQG NGL LRNLW RLEPSLSASGLDLSNGVKTAVWTQL  +PSLQF+ GKVTYDAKDPSI+SFE+AERLN+KV+ KE+LRDNFVGL
Subjt:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSASSNMSAHQRRVLERLAIAR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

A0A6J1I478 uncharacterized protein LOC1114708084.2e-5387.2Show/hide
Query:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MD  VSSAVEEICSQG NGL LRNLW RLEPSLSASGLDLSNGVKTA+WTQLL +PSLQF+ GKV YDAKDPSIQSFE+AERLN+KV+ KE+LRDNFVGL
Subjt:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSASSNMSAHQRRVLERLAIAR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G17450.1 B-block binding subunit of TFIIIC5.2e-2751.2Show/hide
Query:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MD+ V +A+EEIC QG  G+ L +LW RL P        LS  VK  VW  LL VP LQF+     Y+  D SIQ  E+A RL+L++ A E LR NFVGL
Subjt:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        Y+ +S ++ +SA QRRVLERLA+AR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

AT1G17450.2 B-block binding subunit of TFIIIC5.2e-2751.2Show/hide
Query:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MD+ V +A+EEIC QG  G+ L +LW RL P        LS  VK  VW  LL VP LQF+     Y+  D SIQ  E+A RL+L++ A E LR NFVGL
Subjt:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        Y+ +S ++ +SA QRRVLERLA+AR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

AT1G59453.1 B-block binding subunit of TFIIIC1.2e-2853.17Show/hide
Query:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVT-YDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVG
        MD+ +S+A++EICSQG  G+ L  LW RL P        LS+ +KT VW  LL +P LQF+T K T Y + D SIQ+ +DA RL+L++VA E+LR NFVG
Subjt:  MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVT-YDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVG

Query:  LYNVRSASSNMSAHQRRVLERLAIAR
        LY+ +S ++ + A QRRVLERLAIAR
Subjt:  LYNVRSASSNMSAHQRRVLERLAIAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCACCGTCTCCTCCGCCGTCGAAGAAATTTGCTCACAGGGTCTAAACGGACTCGCTCTCCGCAATCTATGGCCCAGGCTCGAACCGTCTCTCTCAGCTTCCGG
CCTCGACCTCTCCAATGGTGTCAAGACCGCCGTCTGGACCCAACTCCTTCGCGTCCCATCCCTGCAATTCGAAACTGGCAAGGTGACCTATGATGCTAAGGACCCATCTA
TTCAGTCATTCGAAGATGCTGAAAGGTTGAATTTGAAGGTTGTGGCCAAAGAGCATCTTAGGGATAATTTTGTAGGGCTCTACAATGTGCGATCAGCCAGTTCCAACATG
TCCGCCCATCAAAGACGTGTCCTTGAGCGACTCGCGATTGCTAGGTACGCTACGAGTAGGCTTGCTGTGTCTTATTCTGCAGTGTGCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGCCACCGTCTCCTCCGCCGTCGAAGAAATTTGCTCACAGGGTCTAAACGGACTCGCTCTCCGCAATCTATGGCCCAGGCTCGAACCGTCTCTCTCAGCTTCCGG
CCTCGACCTCTCCAATGGTGTCAAGACCGCCGTCTGGACCCAACTCCTTCGCGTCCCATCCCTGCAATTCGAAACTGGCAAGGTGACCTATGATGCTAAGGACCCATCTA
TTCAGTCATTCGAAGATGCTGAAAGGTTGAATTTGAAGGTTGTGGCCAAAGAGCATCTTAGGGATAATTTTGTAGGGCTCTACAATGTGCGATCAGCCAGTTCCAACATG
TCCGCCCATCAAAGACGTGTCCTTGAGCGACTCGCGATTGCTAGGTACGCTACGAGTAGGCTTGCTGTGTCTTATTCTGCAGTGTGCATTTGA
Protein sequenceShow/hide protein sequence
MDATVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGLYNVRSASSNM
SAHQRRVLERLAIARYATSRLAVSYSAVCI