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Lag0021604 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021604
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr7:9701998..9702664
RNA-Seq ExpressionLag0021604
SyntenyLag0021604
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]3.3e-2032.74Show/hide
Query:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG----------------
        MK K+P KFK+   +++DG  DP+  LD+Y  W D +G +EAI+C+ FSFTLTG    WF    RKSI SFKE AR FVTQF G                
Subjt:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG----------------

Query:  ---------------------------------QEIDNEKLLSSIGENQPRTYVEFFSRAQKFINVEELLKSKKETVKQESKKHPSYDQDRDIDHNHKKQ
                                           + +E+L+ S G+    T+ E  SRAQ +++V EL+ SK++       K+  Y+  R      +  
Subjt:  ---------------------------------QEIDNEKLLSSIGENQPRTYVEFFSRAQKFINVEELLKSKKETVKQESKKHPSYDQDRDIDHNHKKQ

Query:  IT-HGNDRGRG---QVDPMGKFKEYT
        +    +D G+G   Q DP  KF++YT
Subjt:  IT-HGNDRGRG---QVDPMGKFKEYT

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]4.5e-1754.76Show/hide
Query:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG
        MK K+P KFK+ T +Q DG  D V  LD Y+ WMD +G SEA+KC+ FS TL+G A  WF    R SI SFK  A+ FVTQF+G
Subjt:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]3.5e-1730.49Show/hide
Query:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG----------------
        MK K   KFK+    ++DG  DP+  LD Y+ W D +   EAI+C+ FSFTLTG A  WF    R SI SFKE A  FVTQF+G                
Subjt:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG----------------

Query:  ---------------------------------QEIDNEKLLSSIGENQPRTYVEFFSRAQKFINVEELLKSKKETVKQESKKHPSYDQDRDIDHNHKKQ
                                           + +E+L+ S G+  P T++E  SRAQK+++  EL+   ++   +  + + S  ++R  +  H+  
Subjt:  ---------------------------------QEIDNEKLLSSIGENQPRTYVEFFSRAQKFINVEELLKSKKETVKQESKKHPSYDQDRDIDHNHKKQ

Query:  ITHGNDRGRG---QVDPMGKFKE
            +D G G   Q DP  KF++
Subjt:  ITHGNDRGRG---QVDPMGKFKE

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.8e-1832.74Show/hide
Query:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG----------------
        M+ K+P KFK+ T +Q D   DPV  LD Y+ WMD +G SEA++C+ FS TL G A  WF    R SI SFK  AR FVTQF+G                
Subjt:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG----------------

Query:  ---------------------------------QEIDNEKLLSSIGENQPRTYVEFFSRAQKFINVEELLKSKKETVKQESKKHPSYDQDRDIDHNHKKQ
                                           + +E L  S G+  P T+ E  SRAQ++++  E   SK+E      +  P  ++  D     K Q
Subjt:  ---------------------------------QEIDNEKLLSSIGENQPRTYVEFFSRAQKFINVEELLKSKKETVKQESKKHPSYDQDRDIDHNHKKQ

Query:  ITHGNDRGR-GQVDPMGKFKEYT
         +    R R  Q DP  KF++YT
Subjt:  ITHGNDRGR-GQVDPMGKFKEYT

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]8.5e-1651.19Show/hide
Query:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG
        M+ K+P KFK+ T +  DG  +PV  LD Y+ WMD +G S+AI+C+ FS TL G A  WF    R SI SFK  AR F+TQF+G
Subjt:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166191.6e-2032.74Show/hide
Query:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG----------------
        MK K+P KFK+   +++DG  DP+  LD+Y  W D +G +EAI+C+ FSFTLTG    WF    RKSI SFKE AR FVTQF G                
Subjt:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG----------------

Query:  ---------------------------------QEIDNEKLLSSIGENQPRTYVEFFSRAQKFINVEELLKSKKETVKQESKKHPSYDQDRDIDHNHKKQ
                                           + +E+L+ S G+    T+ E  SRAQ +++V EL+ SK++       K+  Y+  R      +  
Subjt:  ---------------------------------QEIDNEKLLSSIGENQPRTYVEFFSRAQKFINVEELLKSKKETVKQESKKHPSYDQDRDIDHNHKKQ

Query:  IT-HGNDRGRG---QVDPMGKFKEYT
        +    +D G+G   Q DP  KF++YT
Subjt:  IT-HGNDRGRG---QVDPMGKFKEYT

A0A6J1D7D2 uncharacterized protein LOC1110183072.2e-1754.76Show/hide
Query:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG
        MK K+P KFK+ T +Q DG  D V  LD Y+ WMD +G SEA+KC+ FS TL+G A  WF    R SI SFK  A+ FVTQF+G
Subjt:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG

A0A6J1DWY0 uncharacterized protein LOC1110252938.9e-1932.74Show/hide
Query:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG----------------
        M+ K+P KFK+ T +Q D   DPV  LD Y+ WMD +G SEA++C+ FS TL G A  WF    R SI SFK  AR FVTQF+G                
Subjt:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG----------------

Query:  ---------------------------------QEIDNEKLLSSIGENQPRTYVEFFSRAQKFINVEELLKSKKETVKQESKKHPSYDQDRDIDHNHKKQ
                                           + +E L  S G+  P T+ E  SRAQ++++  E   SK+E      +  P  ++  D     K Q
Subjt:  ---------------------------------QEIDNEKLLSSIGENQPRTYVEFFSRAQKFINVEELLKSKKETVKQESKKHPSYDQDRDIDHNHKKQ

Query:  ITHGNDRGR-GQVDPMGKFKEYT
         +    R R  Q DP  KF++YT
Subjt:  ITHGNDRGR-GQVDPMGKFKEYT

A0A6J1DZ49 uncharacterized protein LOC1110248511.7e-1730.49Show/hide
Query:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG----------------
        MK K   KFK+    ++DG  DP+  LD Y+ W D +   EAI+C+ FSFTLTG A  WF    R SI SFKE A  FVTQF+G                
Subjt:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG----------------

Query:  ---------------------------------QEIDNEKLLSSIGENQPRTYVEFFSRAQKFINVEELLKSKKETVKQESKKHPSYDQDRDIDHNHKKQ
                                           + +E+L+ S G+  P T++E  SRAQK+++  EL+   ++   +  + + S  ++R  +  H+  
Subjt:  ---------------------------------QEIDNEKLLSSIGENQPRTYVEFFSRAQKFINVEELLKSKKETVKQESKKHPSYDQDRDIDHNHKKQ

Query:  ITHGNDRGRG---QVDPMGKFKE
            +D G G   Q DP  KF++
Subjt:  ITHGNDRGRG---QVDPMGKFKE

A0A6J1E1E7 uncharacterized protein LOC1110255484.1e-1651.19Show/hide
Query:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG
        M+ K+P KFK+ T +  DG  +PV  LD Y+ WMD +G S+AI+C+ FS TL G A  WF    R SI SFK  AR F+TQF+G
Subjt:  MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTAAAATACCACAGAAGTTCAAGGTTTCAACCTTCCAACAACATGACGGTAAGAAAGACCCTGTGCACCAATTAGATATGTACAAGTCATGGATGGATTTCCA
TGGAGCTTCTGAGGCCATCAAATGTCAAGCTTTTTCTTTCACTTTAACAGGAGTGGCGTGGCAATGGTTTGGAAATTTTCCAAGGAAATCTATAGATTCATTCAAAGAGT
TTGCTCGAGTTTTTGTCACGCAATTTTTGGGGCAAGAGATCGACAATGAGAAGCTCTTGAGTTCTATTGGTGAGAACCAACCTCGCACTTACGTTGAGTTTTTCTCTAGG
GCACAAAAATTCATAAATGTCGAAGAACTGCTCAAGTCAAAGAAGGAAACAGTAAAACAGGAATCCAAAAAGCATCCATCATATGATCAAGACAGGGATATTGATCACAA
CCACAAAAAACAGATAACACATGGCAATGACCGAGGTCGAGGGCAAGTGGACCCCATGGGTAAATTCAAGGAATACACCTCACTTCTATTCCACATGAGCAGATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCTAAAATACCACAGAAGTTCAAGGTTTCAACCTTCCAACAACATGACGGTAAGAAAGACCCTGTGCACCAATTAGATATGTACAAGTCATGGATGGATTTCCA
TGGAGCTTCTGAGGCCATCAAATGTCAAGCTTTTTCTTTCACTTTAACAGGAGTGGCGTGGCAATGGTTTGGAAATTTTCCAAGGAAATCTATAGATTCATTCAAAGAGT
TTGCTCGAGTTTTTGTCACGCAATTTTTGGGGCAAGAGATCGACAATGAGAAGCTCTTGAGTTCTATTGGTGAGAACCAACCTCGCACTTACGTTGAGTTTTTCTCTAGG
GCACAAAAATTCATAAATGTCGAAGAACTGCTCAAGTCAAAGAAGGAAACAGTAAAACAGGAATCCAAAAAGCATCCATCATATGATCAAGACAGGGATATTGATCACAA
CCACAAAAAACAGATAACACATGGCAATGACCGAGGTCGAGGGCAAGTGGACCCCATGGGTAAATTCAAGGAATACACCTCACTTCTATTCCACATGAGCAGATATTAA
Protein sequenceShow/hide protein sequence
MKAKIPQKFKVSTFQQHDGKKDPVHQLDMYKSWMDFHGASEAIKCQAFSFTLTGVAWQWFGNFPRKSIDSFKEFARVFVTQFLGQEIDNEKLLSSIGENQPRTYVEFFSR
AQKFINVEELLKSKKETVKQESKKHPSYDQDRDIDHNHKKQITHGNDRGRGQVDPMGKFKEYTSLLFHMSRY