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Lag0021655 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021655
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr7:10424707..10427852
RNA-Seq ExpressionLag0021655
SyntenyLag0021655
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_041743042.1 extensin-like [Coregonus clupeaformis]3.9e-0530.56Show/hide
Query:  PPPQII-----VMLPPPCLSYVASSSKPLPCRLFLNVTDMLPRLSHCHVASSKPLPCRIHQATAKSAQANAMSVAHNIVQATTLFHPPSHFQVTDMSPLP
        PPP +         PPPCL + ASS++P      ++ T   P L H   ++  P P  +H A+  S Q    S+ H    A++  HPP        SP P
Subjt:  PPPQII-----VMLPPPCLSYVASSSKPLPCRLFLNVTDMLPRLSHCHVASSKPLPCRIHQATAKSAQANAMSVAHNIVQATTLFHPPSHFQVTDMSPLP

Query:  RNYQVDALLVAAMSPPTQSHKQVAMSPPTQSHKQVATSMLPPYCPLLQ-ATDISPLRQSHRHVASSISFQPYVLL----QTKAMPP---RPQITAMLPPP
                L     PP+  H   +  PP  S    A+S LPP   LL  A+   P   S  H ASS    P  LL     T+  PP    P  +   PPP
Subjt:  RNYQVDALLVAAMSPPTQSHKQVAMSPPTQSHKQVATSMLPPYCPLLQ-ATDISPLRQSHRHVASSISFQPYVLL----QTKAMPP---RPQITAMLPPP

Query:  CLRHIASSSKQLPCLPYLKVTPMLPPPSHCHVISIKSSLCCLLLVTFKPSFPSHYISLLEVTSMSLHN-----PSPNNCL--VASSQAPPTLLLQNHRQV
        CL H ASS+  L   P     P  PPPS     S+  +       +  P    H  S  +    SL +     P P + L   +S+Q PP  +L      
Subjt:  CLRHIASSSKQLPCLPYLKVTPMLPPPSHCHVISIKSSLCCLLLVTFKPSFPSHYISLLEVTSMSLHN-----PSPNNCL--VASSQAPPTLLLQNHRQV

Query:  ASFSKSLPSCHVDVFNMLPPSLSH
         S   SL    V     LPPSL H
Subjt:  ASFSKSLPSCHVDVFNMLPPSLSH

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCCTCCACCTCAAATCATTGTCATGTTGCCTCCTCCATGTCTTAGCTATGTTGCCTCTTCCTCCAAGCCACTACCATGTCGCCTCTTCCTTAATGTCACCGACAT
GTTGCCTCGTCTAAGCCACTGCCATGTCGCATCCTCCAAGCCACTGCCATGTCGCATCCACCAAGCCACTGCCAAGTCGGCTCAAGCCAATGCCATGTCAGTGGCTCACA
ATATTGTCCAAGCCACAACCTTGTTTCATCCTCCAAGCCACTTCCAAGTCACCGATATGTCACCTCTACCACGCAACTACCAAGTCGACGCCTTGCTCGTAGCCGCCATG
TCGCCTCCTACTCAAAGTCACAAACAAGTTGCCATGTCGCCTCCTACTCAAAGTCACAAACAAGTTGCCACGTCGATGCTTCCGCCATATTGCCCCCTTCTCCAAGCCAC
TGACATATCGCCTCTTCGTCAAAGTCACCGCCATGTTGCCTCCTCCATTTCTTTCCAACCTTACGTCCTCCTCCAAACAAAAGCAATGCCACCTCGACCTCAAATCACTG
CCATGTTGCCACCTCCGTGCCTTCGCCATATTGCCTCATCCTCCAAGCAACTGCCATGTCTCCCATATCTTAAAGTCACCCCCATGTTGCCTCCTCCAAGCCACTGCCAT
GTAATCTCGATAAAGTCTTCACTATGTTGCCTCCTCCTAGTCACCTTCAAGCCTTCTTTTCCAAGTCATTACATCAGCCTCCTCGAAGTCACAAGTATGTCGTTGCATAA
TCCTTCCCCAAATAATTGCCTTGTCGCTTCCTCCCAAGCACCTCCAACCCTGCTCCTCCAAAATCACCGCCAAGTCGCCTCATTCTCAAAGTCACTGCCAAGTTGCCACG
TCGATGTCTTCAACATGTTGCCTCCTTCTCTAAGCCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCCTCCACCTCAAATCATTGTCATGTTGCCTCCTCCATGTCTTAGCTATGTTGCCTCTTCCTCCAAGCCACTACCATGTCGCCTCTTCCTTAATGTCACCGACAT
GTTGCCTCGTCTAAGCCACTGCCATGTCGCATCCTCCAAGCCACTGCCATGTCGCATCCACCAAGCCACTGCCAAGTCGGCTCAAGCCAATGCCATGTCAGTGGCTCACA
ATATTGTCCAAGCCACAACCTTGTTTCATCCTCCAAGCCACTTCCAAGTCACCGATATGTCACCTCTACCACGCAACTACCAAGTCGACGCCTTGCTCGTAGCCGCCATG
TCGCCTCCTACTCAAAGTCACAAACAAGTTGCCATGTCGCCTCCTACTCAAAGTCACAAACAAGTTGCCACGTCGATGCTTCCGCCATATTGCCCCCTTCTCCAAGCCAC
TGACATATCGCCTCTTCGTCAAAGTCACCGCCATGTTGCCTCCTCCATTTCTTTCCAACCTTACGTCCTCCTCCAAACAAAAGCAATGCCACCTCGACCTCAAATCACTG
CCATGTTGCCACCTCCGTGCCTTCGCCATATTGCCTCATCCTCCAAGCAACTGCCATGTCTCCCATATCTTAAAGTCACCCCCATGTTGCCTCCTCCAAGCCACTGCCAT
GTAATCTCGATAAAGTCTTCACTATGTTGCCTCCTCCTAGTCACCTTCAAGCCTTCTTTTCCAAGTCATTACATCAGCCTCCTCGAAGTCACAAGTATGTCGTTGCATAA
TCCTTCCCCAAATAATTGCCTTGTCGCTTCCTCCCAAGCACCTCCAACCCTGCTCCTCCAAAATCACCGCCAAGTCGCCTCATTCTCAAAGTCACTGCCAAGTTGCCACG
TCGATGTCTTCAACATGTTGCCTCCTTCTCTAAGCCACTGA
Protein sequenceShow/hide protein sequence
MLPPPQIIVMLPPPCLSYVASSSKPLPCRLFLNVTDMLPRLSHCHVASSKPLPCRIHQATAKSAQANAMSVAHNIVQATTLFHPPSHFQVTDMSPLPRNYQVDALLVAAM
SPPTQSHKQVAMSPPTQSHKQVATSMLPPYCPLLQATDISPLRQSHRHVASSISFQPYVLLQTKAMPPRPQITAMLPPPCLRHIASSSKQLPCLPYLKVTPMLPPPSHCH
VISIKSSLCCLLLVTFKPSFPSHYISLLEVTSMSLHNPSPNNCLVASSQAPPTLLLQNHRQVASFSKSLPSCHVDVFNMLPPSLSH