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Lag0021695 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021695
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:10844593..10846332
RNA-Seq ExpressionLag0021695
SyntenyLag0021695
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG9438547.1 hypothetical protein H6P81_021509 [Aristolochia fimbriata]2.0e-0844.87Show/hide
Query:  SASHLLQHCEFAEKVWNRFADSFGIECCKPN----CVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVF
        S +HLL HC+F++KVWN     FGI  C PN     V +W +       L    +VLW     AI+W LW ERNSRVF
Subjt:  SASHLLQHCEFAEKVWNRFADSFGIECCKPN----CVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVF
OVA04495.1 Reverse transcriptase zinc-binding domain [Macleaya cordata]7.2e-0639.24Show/hide
Query:  SASHLLQHCEFAEKVWNRFADSFGIECCKPNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVFLSSKL
        +ASHLL HC  A +VWN F  +F +  C P+     ++    G     + K LW     AI W LWK RN  +F +SKL
Subjt:  SASHLLQHCEFAEKVWNRFADSFGIECCKPNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVFLSSKL
RWR92932.1 hypothetical protein CKAN_02215900 [Cinnamomum micranthum f. kanehirae]1.9e-0638.55Show/hide
Query:  MRSASHLLQHCEFAEKVWNRFADSFGIE-CCK---PNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVFLSS
        M S +HL  HCEF   VW  F    G++ CC     N    WL     GG      ++LW     AI+W +WKERN R+F  S
Subjt:  MRSASHLLQHCEFAEKVWNRFADSFGIE-CCK---PNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVFLSS
XP_026383287.1 uncharacterized protein LOC113278744 [Papaver somniferum]3.8e-0740.54Show/hide
Query:  SASHLLQHCEFAEKVWNRFADSFGIECCKPNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVF
        +A H+  HC++A +VW+ F   F I    P+ V R L E+     L  + K +W     A++WHLWKERNSR F
Subjt:  SASHLLQHCEFAEKVWNRFADSFGIECCKPNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVF
XP_026451761.1 uncharacterized protein LOC113352106 [Papaver somniferum]8.6e-0739.19Show/hide
Query:  SASHLLQHCEFAEKVWNRFADSFGIECCKPNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVF
        +A H+  HC +A +VW+ F  +F +    P  V+      R    L+ K + LW   + AI+WHLWKER+SRVF
Subjt:  SASHLLQHCEFAEKVWNRFADSFGIECCKPNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVF
TrEMBL top hitse value%identityAlignment
A0A200Q242 Reverse transcriptase zinc-binding domain3.5e-0639.24Show/hide
Query:  SASHLLQHCEFAEKVWNRFADSFGIECCKPNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVFLSSKL
        +ASHLL HC  A +VWN F  +F +  C P+     ++    G     + K LW     AI W LWK RN  +F +SKL
Subjt:  SASHLLQHCEFAEKVWNRFADSFGIECCKPNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVFLSSKL
A0A200R220 Reverse transcriptase zinc-binding domain4.6e-0637.97Show/hide
Query:  SASHLLQHCEFAEKVWNRFADSFGIECCKPNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVFLSSKL
        +A HLL HC  A +VWN F  +F +  C P+     ++    G     + K LW     AI W LWK RN  +F +SKL
Subjt:  SASHLLQHCEFAEKVWNRFADSFGIECCKPNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVFLSSKL
A0A2N9FIB6 zf-RVT domain-containing protein3.5e-0641.89Show/hide
Query:  SASHLLQHCEFAEKVWNRFADSFGIECCKPNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVF
        S +HLL HC  A  +WN     FG++   P  V+  L   R G G K + + LW +    I W LW ERNSRVF
Subjt:  SASHLLQHCEFAEKVWNRFADSFGIECCKPNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVF
A0A2N9IZD9 Reverse transcriptase domain-containing protein1.0e-0535Show/hide
Query:  SASHLLQHCEFAEKVWNRFADSFGIECCKPNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVFLSSKLA
        S +HLL HC  A+++W+     FGI    P  VV  L+   +  G K +A  +W      ++W +W+ERN+RVF+  +L+
Subjt:  SASHLLQHCEFAEKVWNRFADSFGIECCKPNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVFLSSKLA
A0A3S3R1F6 Uncharacterized protein9.2e-0738.55Show/hide
Query:  MRSASHLLQHCEFAEKVWNRFADSFGIE-CCK---PNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVFLSS
        M S +HL  HCEF   VW  F    G++ CC     N    WL     GG      ++LW     AI+W +WKERN R+F  S
Subjt:  MRSASHLLQHCEFAEKVWNRFADSFGIE-CCK---PNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVFLSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.5e-0425.66Show/hide
Query:  SHLLQHCEFAEKVWNRFADSFGIECCKPN------CVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVFLSSK---------LARSVTNDM
        +HL   C F+  +W  FA  F     +P+          W+ ++     L+  +  +     ++ V+H+WKERN+R+F S           + R++ N +
Subjt:  SHLLQHCEFAEKVWNRFADSFGIECCKPN------CVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVFLSSK---------LARSVTNDM

Query:  TTFNSADSSHLSL
         +F SAD    SL
Subjt:  TTFNSADSSHLSL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATCAGCCTCTCATCTGCTGCAACATTGTGAGTTTGCTGAGAAAGTCTGGAACCGTTTTGCTGATAGTTTTGGGATTGAGTGTTGCAAACCTAATTGTGTGGTTAG
GTGGTTGAATGAAATCCGGGAGGGAGGTGGTTTAAAGGACAAAGCAAAAGTTCTTTGGTGCAACTTTTCAAGAGCCATTGTGTGGCACCTTTGGAAAGAAAGGAACTCGA
GGGTTTTCCTTTCCTCTAAACTTGCTAGGTCAGTAACTAATGATATGACTACATTCAACTCAGCAGACTCCTCCCATCTATCACTTCATTGTGAAAGACCAGAGAATCGC
AAAAGGCATAGTAGGCATGGAAGGAAGCACTATAAGCTACAAGCTCCCCATCAACCACCTCAATTCAAGGATCCCCTGTCTCTAGTAGTGAGAGTCTTGAGAAAGCTACG
AGAGGTTTTCCATCGGAAGGAGTTCCTTAGAGGTAGTGTCACGGGCGATTCAGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGATCAGCCTCTCATCTGCTGCAACATTGTGAGTTTGCTGAGAAAGTCTGGAACCGTTTTGCTGATAGTTTTGGGATTGAGTGTTGCAAACCTAATTGTGTGGTTAG
GTGGTTGAATGAAATCCGGGAGGGAGGTGGTTTAAAGGACAAAGCAAAAGTTCTTTGGTGCAACTTTTCAAGAGCCATTGTGTGGCACCTTTGGAAAGAAAGGAACTCGA
GGGTTTTCCTTTCCTCTAAACTTGCTAGGTCAGTAACTAATGATATGACTACATTCAACTCAGCAGACTCCTCCCATCTATCACTTCATTGTGAAAGACCAGAGAATCGC
AAAAGGCATAGTAGGCATGGAAGGAAGCACTATAAGCTACAAGCTCCCCATCAACCACCTCAATTCAAGGATCCCCTGTCTCTAGTAGTGAGAGTCTTGAGAAAGCTACG
AGAGGTTTTCCATCGGAAGGAGTTCCTTAGAGGTAGTGTCACGGGCGATTCAGCCTAG
Protein sequenceShow/hide protein sequence
MRSASHLLQHCEFAEKVWNRFADSFGIECCKPNCVVRWLNEIREGGGLKDKAKVLWCNFSRAIVWHLWKERNSRVFLSSKLARSVTNDMTTFNSADSSHLSLHCERPENR
KRHSRHGRKHYKLQAPHQPPQFKDPLSLVVRVLRKLREVFHRKEFLRGSVTGDSA