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Lag0021696 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021696
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr7:10846430..10846744
RNA-Seq ExpressionLag0021696
SyntenyLag0021696
Gene Ontology termsGO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8674890.1 ABSCISIC ACID-INSENSITIVE 5-like protein 1-like [Hibiscus syriacus]6.0e-0640.48Show/hide
Query:  WDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL
        W+I LRR L D EL++W  L SL+D   L DS DD +SW  +G G+F+V S  E+L+          +  +W G +P +V+ FL
Subjt:  WDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL

KAE8692548.1 DNA gyrase subunit B [Hibiscus syriacus]1.9e-0742.05Show/hide
Query:  NGSTWDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL
        NG  WDI LRR L D EL++W  L  L+D  RL +S DD + W   G G+F+V+S   +L+SR      +    +W G  P RV+ FL
Subjt:  NGSTWDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL

KAE8696304.1 Transcription initiation factor TFIID subunit 1 [Hibiscus syriacus]3.5e-0640.91Show/hide
Query:  NGSTWDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL
        NG  W+I  RR LFD EL +W +L   L   +L DS +D +SW   G G+F+V S  ++L      + E  S  +W G SP RV+ FL
Subjt:  NGSTWDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL

KAE8704410.1 PHD finger family protein, putative isoform 2 [Hibiscus syriacus]1.0e-0537.5Show/hide
Query:  NGSTWDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL
        NG  W+I LRR L D EL++W  L  L+D     +S DD + W  +G G+F+V S   +++SR      +    +W G +P RV+ FL
Subjt:  NGSTWDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL

KAE8713962.1 hypothetical protein F3Y22_tig00110202pilonHSYRG00067 [Hibiscus syriacus]3.5e-0641.67Show/hide
Query:  WDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL
        W+I LRR L+D EL++W  L SL+D   L  S DD + W  +G G+F+V S   SL  R     E     +W+G +P RV+ FL
Subjt:  WDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL

TrEMBL top hitse value%identityAlignment
A0A6A2XXK5 ABSCISIC ACID-INSENSITIVE 5-like protein 1-like2.9e-0640.48Show/hide
Query:  WDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL
        W+I LRR L D EL++W  L SL+D   L DS DD +SW  +G G+F+V S  E+L+          +  +W G +P +V+ FL
Subjt:  WDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL

A0A6A2ZKW5 DNA topoisomerase (ATP-hydrolyzing)9.0e-0842.05Show/hide
Query:  NGSTWDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL
        NG  WDI LRR L D EL++W  L  L+D  RL +S DD + W   G G+F+V+S   +L+SR      +    +W G  P RV+ FL
Subjt:  NGSTWDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL

A0A6A2ZWE1 Transcription initiation factor TFIID subunit 11.7e-0640.91Show/hide
Query:  NGSTWDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL
        NG  W+I  RR LFD EL +W +L   L   +L DS +D +SW   G G+F+V S  ++L      + E  S  +W G SP RV+ FL
Subjt:  NGSTWDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL

A0A6A3AIJ9 PHD finger family protein, putative isoform 24.9e-0637.5Show/hide
Query:  NGSTWDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL
        NG  W+I LRR L D EL++W  L  L+D     +S DD + W  +G G+F+V S   +++SR      +    +W G +P RV+ FL
Subjt:  NGSTWDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL

A0A6A3BG14 zf-RVT domain-containing protein1.7e-0641.67Show/hide
Query:  WDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL
        W+I LRR L+D EL++W  L SL+D   L  S DD + W  +G G+F+V S   SL  R     E     +W+G +P RV+ FL
Subjt:  WDIGLRRALFDRELNEWAELSSLLDRCRLGDS-DDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACAGACTGTCTTCGGCTAGAATGGCTAAAGTTTTTTTAGAGTTATGGAATGGGTCCACTTGGGACATTGGCTTGAGAAGAGCGCTTTTCGATAGGGAGCTGAATGA
GTGGGCTGAGTTGTCTTCTCTTCTTGATCGTTGCAGATTGGGTGACAGTGATGATGTGGTTTCTTGGAAGCTTGAGGGTTCGGGAGTTTTCACAGTTAGCTCTGCCCTTG
AGTCCCTCACTTCGAGGAGAAGAGTACTGGAAGAGAGAATAAGCTCTCAAATATGGGAAGGAACAAGTCCCAAAAGGGTGAAATTCTTTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACAGACTGTCTTCGGCTAGAATGGCTAAAGTTTTTTTAGAGTTATGGAATGGGTCCACTTGGGACATTGGCTTGAGAAGAGCGCTTTTCGATAGGGAGCTGAATGA
GTGGGCTGAGTTGTCTTCTCTTCTTGATCGTTGCAGATTGGGTGACAGTGATGATGTGGTTTCTTGGAAGCTTGAGGGTTCGGGAGTTTTCACAGTTAGCTCTGCCCTTG
AGTCCCTCACTTCGAGGAGAAGAGTACTGGAAGAGAGAATAAGCTCTCAAATATGGGAAGGAACAAGTCCCAAAAGGGTGAAATTCTTTCTTTAG
Protein sequenceShow/hide protein sequence
MYRLSSARMAKVFLELWNGSTWDIGLRRALFDRELNEWAELSSLLDRCRLGDSDDVVSWKLEGSGVFTVSSALESLTSRRRVLEERISSQIWEGTSPKRVKFFL