; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0021702 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021702
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr7:10914970..10915595
RNA-Seq ExpressionLag0021702
SyntenyLag0021702
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]8.4e-1557.83Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEG-----GASSSEAP
        FS+PPLNQ+LNQ+ T+KLDR N+LLWK L LPIL+ YKLEGHL G  PCP  ++ S   +++N T T EG     GASSS  P
Subjt:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEG-----GASSSEAP

KAA0060627.1 Reverse transcriptase, RNA-dependent DNA polymerase [Cucumis melo var. makuwa]6.4e-1551.55Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAPAPTSGASSSSIVVEATINP
        FS+PPLNQLLNQ++++KLDRGN+LLWK L LPI++SYK EGHL G  PCPP +I+   N    + +  +G A +      T GASS S   + T+NP
Subjt:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAPAPTSGASSSSIVVEATINP

KAA0066132.1 putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa]1.3e-1854.55Show/hide
Query:  TFSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAPAPTSGASSSSIVVEATINPL
        +F++PPLNQ+LNQ+TTIKLDR N+LLWK L LPIL+ YKLEGHL G KPCP  +++ T++A +N + T EG      AP      +SSS+   A INPL
Subjt:  TFSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAPAPTSGASSSSIVVEATINPL

TYK02246.1 uncharacterized protein E5676_scaffold18G00450 [Cucumis melo var. makuwa]6.4e-1551.55Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAPAPTSGASSSSIVVEATINP
        FS+PPLNQLLNQ++++KLDRGN+LLWK L LPI++SYK EGHL G  PCPP +I+   N    + +  +G A +      T GASS S   + T+NP
Subjt:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAPAPTSGASSSSIVVEATINP

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]2.6e-1660.49Show/hide
Query:  GHTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAP
        G  F+SPPLNQLLNQIT+IK+DRGNFLLW+NL LPILRSYKL  +L G KPCPP ++       T+  T  EG  SS  +P
Subjt:  GHTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAP

TrEMBL top hitse value%identityAlignment
A0A5A7SIT7 Uncharacterized protein4.1e-1557.83Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEG-----GASSSEAP
        FS+PPLNQ+LNQ+ T+KLDR N+LLWK L LPIL+ YKLEGHL G  PCP  ++ S   +++N T T EG     GASSS  P
Subjt:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEG-----GASSSEAP

A0A5A7V1E0 Reverse transcriptase, RNA-dependent DNA polymerase3.1e-1551.55Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAPAPTSGASSSSIVVEATINP
        FS+PPLNQLLNQ++++KLDRGN+LLWK L LPI++SYK EGHL G  PCPP +I+   N    + +  +G A +      T GASS S   + T+NP
Subjt:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAPAPTSGASSSSIVVEATINP

A0A5A7VCS1 Putative leucine-rich repeat receptor-like protein kinase6.1e-1954.55Show/hide
Query:  TFSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAPAPTSGASSSSIVVEATINPL
        +F++PPLNQ+LNQ+TTIKLDR N+LLWK L LPIL+ YKLEGHL G KPCP  +++ T++A +N + T EG      AP      +SSS+   A INPL
Subjt:  TFSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAPAPTSGASSSSIVVEATINPL

A0A5D3BVJ1 Uncharacterized protein3.1e-1551.55Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAPAPTSGASSSSIVVEATINP
        FS+PPLNQLLNQ++++KLDRGN+LLWK L LPI++SYK EGHL G  PCPP +I+   N    + +  +G A +      T GASS S   + T+NP
Subjt:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAPAPTSGASSSSIVVEATINP

A0A6J1DCW4 uncharacterized protein LOC1110195981.3e-1660.49Show/hide
Query:  GHTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAP
        G  F+SPPLNQLLNQIT+IK+DRGNFLLW+NL LPILRSYKL  +L G KPCPP ++       T+  T  EG  SS  +P
Subjt:  GHTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATACAATCACCAAGTGACTCAGACAATCATCCTATTCATGGTGCTAAGAATTCTGGAAGCTTCGGCCACACCTTCAGCAGCCCGCCTCTTAATCAGCTGCTTAA
TCAGATTACAACAATCAAGCTCGATCGAGGGAACTTCTTGCTGTGGAAAAATTTGACACTGCCTATTTTGAGAAGCTATAAGCTAGAGGGACATCTGTTAGGCTCAAAGC
CATGTCCTCCGATGTATATATCGTCCACAGCCAATGCTACAACAAATGCTACAACAACAGCCGAAGGAGGAGCATCTAGCTCCGAAGCACCAGCTCCAACAAGTGGAGCA
TCAAGCTCAAGCATAGTGGTTGAAGCCACGATTAATCCATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGATACAATCACCAAGTGACTCAGACAATCATCCTATTCATGGTGCTAAGAATTCTGGAAGCTTCGGCCACACCTTCAGCAGCCCGCCTCTTAATCAGCTGCTTAA
TCAGATTACAACAATCAAGCTCGATCGAGGGAACTTCTTGCTGTGGAAAAATTTGACACTGCCTATTTTGAGAAGCTATAAGCTAGAGGGACATCTGTTAGGCTCAAAGC
CATGTCCTCCGATGTATATATCGTCCACAGCCAATGCTACAACAAATGCTACAACAACAGCCGAAGGAGGAGCATCTAGCTCCGAAGCACCAGCTCCAACAAGTGGAGCA
TCAAGCTCAAGCATAGTGGTTGAAGCCACGATTAATCCATTATGA
Protein sequenceShow/hide protein sequence
MMIQSPSDSDNHPIHGAKNSGSFGHTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTLPILRSYKLEGHLLGSKPCPPMYISSTANATTNATTTAEGGASSSEAPAPTSGA
SSSSIVVEATINPL