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Lag0021720 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0021720
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:11144886..11145689
RNA-Seq ExpressionLag0021720
SyntenyLag0021720
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]9.8e-3733.21Show/hide
Query:  EAVLKQLVELKVTPEEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTI-IDNRGLNLFLCKFKNARIKGYIMDSGPWFYD
        EA + QL E     +E A+V ++ +D I+  ++ +   ++ K+LT KK+N E FK ++ +IWNQ   + ++  G N F+  F N   +  + + GPW + 
Subjt:  EAVLKQLVELKVTPEEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTI-IDNRGLNLFLCKFKNARIKGYIMDSGPWFYD

Query:  KSMLILQDPKGDCCGEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWIAV
        KS+++L+ PKG      + F    FWV  H +P+ C ++ +   +   +G+V  V++  E  E WG  +R+KVQ+D+T+PLKR + +K  K      +A+
Subjt:  KSMLILQDPKGDCCGEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWIAV

Query:  TYEKLPDFCYGCGCLGHIIKECEVDSGSSA----EDLPYGPSLR-EPI-KLKIKDSSPTKSSDGK
         YE+LPDFC+ CG +GH ++EC  +    A    +   +G  +R  PI K K K  S T  S  +
Subjt:  TYEKLPDFCYGCGCLGHIIKECEVDSGSSA----EDLPYGPSLR-EPI-KLKIKDSSPTKSSDGK

TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]1.2e-3934.02Show/hide
Query:  EEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTI-IDNRGLNLFLCKFKNARIKGYIMDSGPWFYDKSMLILQDPKGDCC
        ++   + +++    E  E+ L+ +++ K +TNK IN E FKS +  IW  ++ + ++  G+N+F  +F+N   +  I++ GPW +DK +L+L++  G   
Subjt:  EEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTI-IDNRGLNLFLCKFKNARIKGYIMDSGPWFYDKSMLILQDPKGDCC

Query:  GEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWIAVTYEKLPDFCYGCGC
          D+ FRYVPFW+  H LPLAC +RE  + +G L+G+V+++D  E   E  G  +RI+V IDV  PLKRG+ +          + + YE+LP+FCY CG 
Subjt:  GEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWIAVTYEKLPDFCYGCGC

Query:  LGHIIKECEVDSG--SSAEDLPYGPSLREPIKLKIKDSSPTKSS
        +GH++++C +++   +S+    +GP +R   + + K +   K+S
Subjt:  LGHIIKECEVDSG--SSAEDLPYGPSLREPIKLKIKDSSPTKSS

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]5.4e-3536.36Show/hide
Query:  LTEKKLANAVMCKILTNKKINPEIFKSMMPKIWN-QEHTIIDNRGLNLFLCKFKNARIKGYIMDSGPWFYDKSMLILQDPKGDCCGEDMDFRYVPFWVHF
        LT   +   V+ K+ T+K+I+ E  +S+M  +W     T  +  G+N+++  FK+   K  ++ SGPW ++KS+L+L  P       DM+F +  FW+  
Subjt:  LTEKKLANAVMCKILTNKKINPEIFKSMMPKIWN-QEHTIIDNRGLNLFLCKFKNARIKGYIMDSGPWFYDKSMLILQDPKGDCCGEDMDFRYVPFWVHF

Query:  HKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENW-GCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWIAVTYEKLPDFCYGCGCLGHIIKECEVDSGS
        H +P  C S E A  +G+ LG VE+++ D    + W G  +R++V+IDV++PL+RG+ +K++  G + W  + YEKLPDFCY CG +GH  +ECE  S  
Subjt:  HKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENW-GCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWIAVTYEKLPDFCYGCGCLGHIIKECEVDSGS

Query:  SAEDLP--YGPSLREPIKLK
           + P  YG  LR  +  K
Subjt:  SAEDLP--YGPSLREPIKLK

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]2.2e-3633.33Show/hide
Query:  EEEAVLKQLVELKVTPEEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTI-IDNRGLNLFLCKFKNARIKGYIMDSGPWF
        + E +L    + K+T EE      +  DA+++ E+ LA +++ K+L  + I+ ++   ++   W  EH + +++ G NLFL  F        +M +GPWF
Subjt:  EEEAVLKQLVELKVTPEEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTI-IDNRGLNLFLCKFKNARIKGYIMDSGPWF

Query:  YDKSMLILQDPKGDCCGEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWI
        +DK++++LQ P       +++F  V FW+H   LP++  ++  A+ +G+ +G    VD +E+   +WG SLRI+V ID+T+PL+RG+ +         WI
Subjt:  YDKSMLILQDPKGDCCGEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWI

Query:  AVTYEKLPDFCYGCGCLGHIIKECEV-------DSGSSAEDLPYGPSLR
         + YE+LPDFCY CG +GH   +C+        DS +++E   YGP LR
Subjt:  AVTYEKLPDFCYGCGCLGHIIKECEV-------DSGSSAEDLPYGPSLR

XP_024033132.1 uncharacterized protein LOC112095437 [Citrus clementina]1.9e-3533.06Show/hide
Query:  EEEAVLKQLVELKVTPEEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTI-IDNRGLNLFLCKFKNARIKGYIMDSGPWF
        E E ++++   + +  EE A  F       E   K +A  ++ KIL  + +N E  K+ + + W   H   +++ G N+F+ KF +   K  + + GPW 
Subjt:  EEEAVLKQLVELKVTPEEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTI-IDNRGLNLFLCKFKNARIKGYIMDSGPWF

Query:  YDKSMLILQDPKGDCCGEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWI
        +D+++++LQ+PKG    +   F +V FW+  H +PL C       E+GS +GKVE + +D +  E +G  +RI+V +++T+PLK+ + +K  +   +  +
Subjt:  YDKSMLILQDPKGDCCGEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWI

Query:  AVTYEKLPDFCYGCGCLGHIIKECEVDSGSSAEDLPYGPSLR
         V YE+LPDFC+ CGC+GH  +EC    G   E+LP+GP L+
Subjt:  AVTYEKLPDFCYGCGCLGHIIKECEVDSGSSAEDLPYGPSLR

TrEMBL top hitse value%identityAlignment
A0A5C7GU64 CCHC-type domain-containing protein4.8e-3733.21Show/hide
Query:  EAVLKQLVELKVTPEEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTI-IDNRGLNLFLCKFKNARIKGYIMDSGPWFYD
        EA + QL E     +E A+V ++ +D I+  ++ +   ++ K+LT KK+N E FK ++ +IWNQ   + ++  G N F+  F N   +  + + GPW + 
Subjt:  EAVLKQLVELKVTPEEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTI-IDNRGLNLFLCKFKNARIKGYIMDSGPWFYD

Query:  KSMLILQDPKGDCCGEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWIAV
        KS+++L+ PKG      + F    FWV  H +P+ C ++ +   +   +G+V  V++  E  E WG  +R+KVQ+D+T+PLKR + +K  K      +A+
Subjt:  KSMLILQDPKGDCCGEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWIAV

Query:  TYEKLPDFCYGCGCLGHIIKECEVDSGSSA----EDLPYGPSLR-EPI-KLKIKDSSPTKSSDGK
         YE+LPDFC+ CG +GH ++EC  +    A    +   +G  +R  PI K K K  S T  S  +
Subjt:  TYEKLPDFCYGCGCLGHIIKECEVDSGSSA----EDLPYGPSLR-EPI-KLKIKDSSPTKSSDGK

A0A5C7H9Y2 CCHC-type domain-containing protein6.0e-4034.02Show/hide
Query:  EEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTI-IDNRGLNLFLCKFKNARIKGYIMDSGPWFYDKSMLILQDPKGDCC
        ++   + +++    E  E+ L+ +++ K +TNK IN E FKS +  IW  ++ + ++  G+N+F  +F+N   +  I++ GPW +DK +L+L++  G   
Subjt:  EEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTI-IDNRGLNLFLCKFKNARIKGYIMDSGPWFYDKSMLILQDPKGDCC

Query:  GEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWIAVTYEKLPDFCYGCGC
          D+ FRYVPFW+  H LPLAC +RE  + +G L+G+V+++D  E   E  G  +RI+V IDV  PLKRG+ +          + + YE+LP+FCY CG 
Subjt:  GEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWIAVTYEKLPDFCYGCGC

Query:  LGHIIKECEVDSG--SSAEDLPYGPSLREPIKLKIKDSSPTKSS
        +GH++++C +++   +S+    +GP +R   + + K +   K+S
Subjt:  LGHIIKECEVDSG--SSAEDLPYGPSLREPIKLKIKDSSPTKSS

A0A6J1BSZ1 uncharacterized protein LOC1110054811.7e-3435.12Show/hide
Query:  VLKQLVELKVTPEEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTI--IDNRGLNLFLCKFKNARIKGYIMDSGPWFYDK
        +L++    K+T EE      +   A+E T K L  +++CK+L+ + I+  + K+ +   W  +     +D  G N+FL  F  +  +  I+  GPW +D+
Subjt:  VLKQLVELKVTPEEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTI--IDNRGLNLFLCKFKNARIKGYIMDSGPWFYDK

Query:  SMLILQDPKGDCCGEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWIAVT
        +++I+ +P       DMDFR V  WVHF  L LAC ++  A  +G+ +G  E V+ +   +  WG  LR++V+ DV +PL RG+ +         WI + 
Subjt:  SMLILQDPKGDCCGEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWIAVT

Query:  YEKLPDFCYGCGCLGHIIKECE---VDSGSSAEDLPYGPSLR
        YE+LPDF Y CG L HI+K+C    VDS S  ++L YGP LR
Subjt:  YEKLPDFCYGCGCLGHIIKECE---VDSGSSAEDLPYGPSLR

A0A6J1D765 uncharacterized protein LOC1110179022.6e-3536.36Show/hide
Query:  LTEKKLANAVMCKILTNKKINPEIFKSMMPKIWN-QEHTIIDNRGLNLFLCKFKNARIKGYIMDSGPWFYDKSMLILQDPKGDCCGEDMDFRYVPFWVHF
        LT   +   V+ K+ T+K+I+ E  +S+M  +W     T  +  G+N+++  FK+   K  ++ SGPW ++KS+L+L  P       DM+F +  FW+  
Subjt:  LTEKKLANAVMCKILTNKKINPEIFKSMMPKIWN-QEHTIIDNRGLNLFLCKFKNARIKGYIMDSGPWFYDKSMLILQDPKGDCCGEDMDFRYVPFWVHF

Query:  HKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENW-GCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWIAVTYEKLPDFCYGCGCLGHIIKECEVDSGS
        H +P  C S E A  +G+ LG VE+++ D    + W G  +R++V+IDV++PL+RG+ +K++  G + W  + YEKLPDFCY CG +GH  +ECE  S  
Subjt:  HKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENW-GCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWIAVTYEKLPDFCYGCGCLGHIIKECEVDSGS

Query:  SAEDLP--YGPSLREPIKLK
           + P  YG  LR  +  K
Subjt:  SAEDLP--YGPSLREPIKLK

A0A6J1DU55 uncharacterized protein LOC1110231351.1e-3633.33Show/hide
Query:  EEEAVLKQLVELKVTPEEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTI-IDNRGLNLFLCKFKNARIKGYIMDSGPWF
        + E +L    + K+T EE      +  DA+++ E+ LA +++ K+L  + I+ ++   ++   W  EH + +++ G NLFL  F        +M +GPWF
Subjt:  EEEAVLKQLVELKVTPEEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTI-IDNRGLNLFLCKFKNARIKGYIMDSGPWF

Query:  YDKSMLILQDPKGDCCGEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWI
        +DK++++LQ P       +++F  V FW+H   LP++  ++  A+ +G+ +G    VD +E+   +WG SLRI+V ID+T+PL+RG+ +         WI
Subjt:  YDKSMLILQDPKGDCCGEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWI

Query:  AVTYEKLPDFCYGCGCLGHIIKECEV-------DSGSSAEDLPYGPSLR
         + YE+LPDFCY CG +GH   +C+        DS +++E   YGP LR
Subjt:  AVTYEKLPDFCYGCGCLGHIIKECEV-------DSGSSAEDLPYGPSLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding1.1e-0623.61Show/hide
Query:  IMDSGPWFYDKSMLILQDPKGDCCGEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSA
        I+  GPW ++  M ++Q  +      D +F+ +PFW+    +PL   +      IG  +G   + +L  ++         +K Q                
Subjt:  IMDSGPWFYDKSMLILQDPKGDCCGEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSA

Query:  KTGTEKWIAVTYEKLPDFCYGCGCLGHIIKECEV--DSGSSAED
                   YEKL +FC  CG L H   EC    + G  A+D
Subjt:  KTGTEKWIAVTYEKLPDFCYGCGCLGHIIKECEV--DSGSSAED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAACAAGTTGTGAAGAAGAAGCGGTGTTAAAGCAGTTGGTAGAGCTGAAAGTTACACCTGAGGAAAAAGCAAGTGTTTTCCAATTACAAGACGACGCAATTGA
ACTCACGGAGAAGAAGCTTGCAAATGCGGTCATGTGCAAAATTCTTACGAATAAGAAAATAAATCCCGAGATTTTCAAGTCCATGATGCCGAAGATTTGGAACCAGGAGC
ATACGATTATTGACAACAGGGGTCTCAATCTTTTCTTGTGCAAGTTCAAAAATGCTCGCATCAAAGGATACATAATGGATTCCGGTCCATGGTTCTACGATAAATCTATG
CTCATCCTGCAAGACCCGAAAGGAGACTGCTGTGGGGAAGACATGGATTTCAGATATGTACCATTTTGGGTTCATTTTCATAAACTTCCTTTGGCTTGTTTTTCCAGGGA
ATCGGCGATGGAAATTGGGAGCTTACTCGGCAAAGTCGAGCAAGTGGATCTGGATGAAGAGCTCGATGAAAATTGGGGTTGTTCGTTGCGAATAAAAGTTCAGATAGATG
TTACAAGACCACTGAAACGTGGGGTATTTATGAAATCGGCAAAAACTGGTACTGAGAAATGGATTGCAGTCACATACGAGAAACTTCCTGACTTTTGTTATGGATGTGGA
TGTTTGGGGCATATAATCAAAGAATGTGAGGTTGATAGTGGTTCTAGCGCAGAAGATCTTCCATATGGCCCAAGTCTGAGGGAACCAATTAAGTTAAAGATCAAAGATTC
CTCACCTACGAAGTCTTCAGATGGCAAATACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCAACAAGTTGTGAAGAAGAAGCGGTGTTAAAGCAGTTGGTAGAGCTGAAAGTTACACCTGAGGAAAAAGCAAGTGTTTTCCAATTACAAGACGACGCAATTGA
ACTCACGGAGAAGAAGCTTGCAAATGCGGTCATGTGCAAAATTCTTACGAATAAGAAAATAAATCCCGAGATTTTCAAGTCCATGATGCCGAAGATTTGGAACCAGGAGC
ATACGATTATTGACAACAGGGGTCTCAATCTTTTCTTGTGCAAGTTCAAAAATGCTCGCATCAAAGGATACATAATGGATTCCGGTCCATGGTTCTACGATAAATCTATG
CTCATCCTGCAAGACCCGAAAGGAGACTGCTGTGGGGAAGACATGGATTTCAGATATGTACCATTTTGGGTTCATTTTCATAAACTTCCTTTGGCTTGTTTTTCCAGGGA
ATCGGCGATGGAAATTGGGAGCTTACTCGGCAAAGTCGAGCAAGTGGATCTGGATGAAGAGCTCGATGAAAATTGGGGTTGTTCGTTGCGAATAAAAGTTCAGATAGATG
TTACAAGACCACTGAAACGTGGGGTATTTATGAAATCGGCAAAAACTGGTACTGAGAAATGGATTGCAGTCACATACGAGAAACTTCCTGACTTTTGTTATGGATGTGGA
TGTTTGGGGCATATAATCAAAGAATGTGAGGTTGATAGTGGTTCTAGCGCAGAAGATCTTCCATATGGCCCAAGTCTGAGGGAACCAATTAAGTTAAAGATCAAAGATTC
CTCACCTACGAAGTCTTCAGATGGCAAATACTAA
Protein sequenceShow/hide protein sequence
MASTSCEEEAVLKQLVELKVTPEEKASVFQLQDDAIELTEKKLANAVMCKILTNKKINPEIFKSMMPKIWNQEHTIIDNRGLNLFLCKFKNARIKGYIMDSGPWFYDKSM
LILQDPKGDCCGEDMDFRYVPFWVHFHKLPLACFSRESAMEIGSLLGKVEQVDLDEELDENWGCSLRIKVQIDVTRPLKRGVFMKSAKTGTEKWIAVTYEKLPDFCYGCG
CLGHIIKECEVDSGSSAEDLPYGPSLREPIKLKIKDSSPTKSSDGKY